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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046762 ID=TCONS_00046762|Name=TCONS_00046762|organism=Clytia hemisphaerica|type=transcript|length=1313bp
GTTAAGAGTATGTTTGACAGTGGAGTTAACATCAATTTCAAAGCCTCAgt
catgttttgatattttatcatttttgcaTAGAGTCTCATCTTGTTTTCAT
TTGGCCATTTTTTTGTAGCAGCATCTTCCCAGTATTCACTTTTGGCCAGC
TGACCGAAGATAAAAGACAATCATGATCTGATTTCAGGTTACTTTTAGCA
TATTCTATTGAAACTgatcatttagaaacaaaacaaCACTGTAAAACAAT
GACTATGGCAAGTGAAAAGAAAGGGAAGAAAAGAAGCTTCAAAAATGAGG
GGCACAAATCGTCAAAGAAGCCTTTCCTAGAGGAGGAggttgaaaataag
attttagcTGATGTTGACCAAGATGAGATTGACGAAGTACTTGCGGCACA
AGAATTTCCAATGCAAAAAgtatcaaagaaaaagaagaaagaatctGTAA
CTGAAGTAGAATCAGAACCAATGGATGGTTCTAATGAGACACCACCAGCT
ATTGATTATCTGTTGGGTTGGAAATCTAAAGACAAAGATTGGAAATTTAG
AAAGTTGCGACAAACATGGCTCTTGCAGAATATGTATGATAAAGAAAAGG
TTTCCAAAGCGAACTTTAAGATTTTGTTGGAATACCTGGAAGATTTGAAA
GGTGCAGCTAGAGAACAAACTTTAAAAGAAGCAAAAGAATTTGTTGAAGC
TAACGAGGACAATGaagAATGCACTGAGAAGAGAAAATTGAAGCGATCGT
TAAACGTCCTCAAAGTATTGACCTGATTCAAAAGCTGAATATACAGTACA
AAACGGTGCTGGTGAAATGACGCCATCATGATTGAGCAACCCCTGCATTT
GGCttccggaaaaagaatttaCATCAAATGGTTTAGAGACCAATTTTGGA
GGTTAAAATCCCTCTGAATCTCTTTCAAGGAAATAAAAGGAAAGGGGGAA
TCGTGTTCATTCCTCTCTCAACAATTACAAAATGCAAAGAGTTGTAATGT
AATGGTCACACAGTTGACACTCAATGAACATCGATTCAATGTTCATAAAT
GCTTTACAAacgttgtttttcattttcgtgaTCAATGGACATATATTTTA
TcacaaagaaatatattttattacaaaatatGATCAAAAGTAGTGTTTAT
CAATGAAGGTATAGCTGTAGACTTAAAAAAGACCTGTTAGAATAATGTTA
GATTTATACAGGTTAATTccttaaaggccggtctccacttgcgcacgctg
cgatcgcactttttggcttcaatcctttttgcttggaaaaaagattacgt
catgaaaatGTAG Run BLAST on NCBI transcript from alignment at scaffold_117:57181..77216+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046762 ID=TCONS_00046762|Name=TCONS_00046762|organism=Clytia hemisphaerica|type=transcript|length=20036bp|location=Sequence derived from alignment at scaffold_117:57181..77216+ (Clytia hemisphaerica)
GTTAAGAGTATGTTTGACAGTGGAGTTAACATCAATTTCAAAGCCTCAgt
catgttttgatattttatcatttttgcaTAGAGTCTCATCTTGTTTTCAT
TTGGCCATTTTTTTGTAGCAGCATCTTCCCAGTATTCACTTTTGGCCAGC
TGGTAggttttttgtttcttgttttctGTTTTTGCCTTTCTCTTTTGGTC
TTTGTGTGCCTTTCATCCAGGTCTTGGGCCGTTTATTGTCAATTCAGATT
TATttaaagtttagtttttctaagtTCATTATTCAAAGCATAGCATCTAc
tttcatattttcaatcaaTTCCTCGCATGTCAATAGGTCTAGCCTAGatt
ctcaattttatttcaaatactcagttttgttactattttaCTTTTCAGTT
TGAACTCTTGTCAATAAATCTTCAGTACATTCAATCAACTCTTGAGTTCC
AAACACAGCCCTTCTCTGGCTACGCACTGCTGCCATCAGActtaatatat
agataaaagatagattttaattcaaaaataaatacttacaaaacagcaaa
agacaacaaagtctttgagaaatttgttcttaattttgtcACTAATTTGT
TCAATTAATAAAAAGCCTACTCAGTGCAAAATCGAACTTGTGTATTTTAT
AATCTCCTGTTCGCATTGACTCAAattaatgactttggaggttcgacAAA
ATGGTGGCCGAGTTgatttgtcagatagtcccaagttagagcagttgacg
ataGCTAATTCTGTTTTGACGCCATTAGAAAATTCCACAAAGaaatgctg
ctctgccacccaaaagtgaatatagttggacagaaattcttatttcttca
catatatatatcatattttcaatctTTTGCTTCATCTTTGGACTTTGGAC
AGAAATATATATCATCGTGTTCCTAATAAAAGCCGCAAAACAAATAtcgt
atttttattttcaacacaACTTGTTATTGAGCATTTTAAGTACCTTAAAT
TTATAAGCCTTTGatctttctgtttttcttttgtttagcgtggcgctaaa
tgatgagattactcatttttttttgcCGTTTGAAATATGACAGTGTGCTT
GACTGCCTGTATCATCAGACTAATTctaaaatgttgcaaaaacatTTCCT
GTGTGTACTTTTTCTAGTCCAGATATGAGTCCTCAGTGCTATATATGCAC
GTCGTCGAAGCAGCTAAAAAATCACTATTTTTCCGGAGCTCTTCTGGTGC
TTCcggagcaagtgatttttatcaCGTTCTAAAAAAACGTTCAAACatgg
ttacaaaaaatatttgtccccaGGTGATGGGACACTTTGGTCAAATAAAA
TACTTAGTCTTTGAGGATGATGGTTGagccattaatgaaattgaatttgt
cacattatAGCTATATTGAAAAGCGTCACAGTTCAAAATATCGAAACTAC
CATGAGCCGGCTGAACTTTTTAAAATACGATACACGCGTGTGCAGTTGGC
AGAAGTGCACCGAAACGTTTCGGAGTTCCTGTGTAGACCAATCGCCGAAA
ATCGTGCTCCAGAATCTTCTGGTGTTCCAGAGCACGAAAAAACGGCACTT
TTTGCCGggacaggctagctctaaagctctaacacagcatctaataacat
gaaaaccagaatatggtttctcaatgggaatcaaaactacaaagtgcact
tacaaacatcaatttgtcagatctaacaaaatcaataacggcactgtcat
cattgacaatcaaacaagcgatattctgtcaagagccttgtaaacattcc
aacaatttccatcaaaatgatctgcGGTCACAGCtatgtctaccatttta
gcgcgtTGTCCGAGGCGAGGATTGAGCTGAGAACGCTCGCAGAACGCCTG
TCGGCTcccgcgcgggtgaaaaactttaatctgtcaattaTATTCCCAAG
CAAAAagacgcgaagcgattctagctttaagATAGtgacgcgaagcgatt
ctagctttacgatagtgacACAAAGCGATTCTAGTTTTAGGATAGTGCCG
CAGGATCATCAGtgaatagtattcaattatcattatatatccctttattt
tcatttctagaacttttgcaaaaaaaaggaaaaatagaaaaataaacttg
tattttttactgctctattcacatacgcgttatcagtgaaagttatcgtg
acatgttatgacacagaaagtatgattgataaacttggtagAATTATCaa
cacaaatttgttgtcaaagagattaaaacaataagtgaaaatacaggcca
gataatcaacagtcccatgtttcgaacAATTGTCCCAAGAAGTTTAGAGG
AGTTGTGACAGTAGGTCTATACTGCGGGAGGGTCCTGCTTTTTTAGTAGA
ATCTGAAACACTTTTAGCAttatacatagaaaaaaagtttaaagggTTCA
AATTTCAggggaaaatgaaatgaaacatttgctTGTTTGAGGTCAacaaa
agttgcatgacttctatCTGGATTCGCTTAACATTATTAAGGCCATATAT
TGACCGTACCTATTATAAAAGAATGATGGGGTCCTTTTAAGAAGCTGTAC
ACAGCTGTACAgccagttagggaaaccatccaggatcctgccattctata
agccagcaaaaactaagtgatacttgtaaacttaagtttcttaccatttt
ccataaaacaatcgaaaacattACTAGTTCCCAAAGCCGGAACCAGAGCA
AATGATCTTCCTTGATGAGAgtgcccttttggatctattgttccAGGCGT
CCGcactcgataggatcgatcatcggaacggctcNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgtcatcgatcgttaat
cgattcgtcatcgatcgttaatcgattcgtcatcgatcgttaatcgattc
gtcatcgattataaatcgattatgcatcgattatGCATCTATCATGTATC
GATCATGTATCGATCATACATTGAGcccgtaaatcctcgaataagcttat
ttaatttttcaggctctaatGTTGAAAGTTTCCCCGACCTTTTCCCAGAG
CTTTCTTAGcgtttctacatcgggtgccagataagtacCGATAAGTAAAT
CCGGTTTGACGCTATTAGATCGATATGGATCGattaatcaatataaaaaa
acggtcgatattttgattggatcgATAGANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctctatcgatctcctatcc
ggatcgataagtaatccatcgatcacatatcgatccgtcatcgagccgtt
ccgatgatcgatcctatcgagcgcggacgccTGGATTGTTAACTTgttta
aaatggtggacagagttgcggaatgataaaggcgcccgctgcttcgaggg
tggtaacgccaaaacaccCAATATGATCAGCCAACAGAAGACGAGTTTGT
TGCAGCGCAAGTtgcgtcatgcactccaccgtagcGAAAGCACAAACAAC
ATTTcgcaattataagaatatcttatgtgcttgattctatttgactttga
gagcttcattgaaaatgaaaaagtagaaagataagaaatgcgctggttaa
ttttgtttggagaaatttctaccggcgcaaagattttttacagccaatta
aaggcacagtctgcttataattactatgtttgctatatcgtCTAGGCAAA
AAAACGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAA
AAAGACGCAaacgtaatttttttatgagtgcggttatgatttttttgatt
gcagccgcgtacaggaactcgccaaatgttcctaactgacagcACTTTAC
AGAAATTATCTCTTGATTTGcccaatttttaaacattactctAAAAATTG
CAGTCTAGATAGCTATTTAAATTTATCCGAATCAAATCTGTTCTCAACTA
AAAATACAATCACCCACAAAAATGTATCACTGACGACAAAATCTTAGGCA
ACTGGATCACAGAAGATGGCAAACTTTCTGAGCAGTTAAAGGAAATTGAA
AAACGGAGTTGGGCTATGTTAAATGAGCTGAAAGGAACAGTGAAGGAAGA
ATGGTTGGGATCAATGTCCACAGATGCAGCACTGCTAGTTTATGAGAGAA
CAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAAGACCAATAATTGGGCATCAGA
GACAAGAAGAATTGCTAGAGACATTGGGGTAGACTTGAACACTGCTAAGG
AATACAAGAAAGAACTATGGAAGAAAGTACAATAAAGAGGAAAATTGCTG
AGCAGATTGAAAGGGAGTTGGATGAGAAAGAAATGAGAAAGATGAGGCAT
CAAAGTGGACAAAGGTTTGAAAGGAAAAGTTATCTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATAGCATGTAGAAGTACAACAGCTCCTGC
CGAATTGACAGTAGCATGCTTGAAGGAAACGGACGATCTTAACATCATTA
GACAAACAAATCAATTTCTAAATCTACAAATAGAAAAAAGAGACAAAGAG
GAAAAACTAAAAGAAACATTGTAAacaaatcaaaaggaaaaaaaaaaaaa
aaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgttc
tcacacttatgtctttttttttcgcgtccttttccgtgattacttttatt
tatatttttaaagacaggtaagaaggcatattgatgtaactgattaTAAG
ATTCAAGATTCAAGATTCAAGACATCCCCTCTGTCTGTCAGCCTgagagg
aaaaaattgaaaaaactaaaaatttaaacacttAACACAACAAAATACAT
ACATAATATAGTAGAAGAAAAAACaagcagttttaaacaaattGAACAAA
TTGATACGGTATAAGGagaaagaaaatatgaaaataggCAAAAAAACTGC
TGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCTTCTAA
TTGCACGCTTAAAATTCCGAGATTTAAACGCGTAATTGCACGGCTATCAA
ATTGTAAggtttttaaaagtgtttttaccTATCAATTTCATGTTCTAAAT
AATCTAAATCAGTATTATAACCAGActgtgtcaatcgaacaacttcgaac
aaaaatcgcaatcgaaccaatcgaacgtaatcgaatgcgatcgaataatt
gcgattcgattgtcgaacgtaatggaatcttaatcgaacggccgattcct
gggtaatattcgattgtgttcgattgcgtttgagtaatgttcgattgata
gttgactatgttcgattggttcgattgattgtcaattatattggattaat
gttcgattacgattatgttcgatgagtttgattgcgattaaattaaattt
gatcactctgttagagctttttagcgcgGGCGGCTGAGTGCTTTTAAGta
ccataccaaagcgaataaaatctaatacaattgaatacaatcgaacgtaa
tcgaagcaatcgaacgtaatcgaagcaatcgaacagtaaatcctgggtaa
tattcgattgcaattcgattgcgttcgacaatcgaatttcaattattcga
ttgcgttcaattgcgttcgattcgttcgattgacaccgtctggttataAT
CATTGCTTACATTGAGATACATCATTTACAAGTtattagaaaagaaatga
aaacacttttcgtTTGTGTGAGTTCAAAATAGACGATTTTCCTCGAGTTT
tctcggaaaaaaatctggaatgCTTGGTCAATTTTACGCAAAATTTTACG
AAGATTCcaattcaaaaatcagtttttgtccGTTTGACCATGGTTCCATC
CgttttttaaaaaagtaagcCCCACTATATTACTCAAGCTTCTTCAAGCA
GGGCGGAAAATTAAGCGTGCAATTACACATGGGTGGACTCGGGCGCACTA
TGATAAGCGCGCATTTACAAGTTTACGCCTGCGGAAGTTAAGCGTGCAAT
TAGAAGGATTTCTCAGACTGTGAGAAAGtccaacaaaaaattaaaaaaca
gtCAACCATTTTGCATTACGTCATTGCTAAcctgaaattgaatttttctc
aATAATTTTTACTTACAACCTGTTCCGTATAATTTGctatcaatatttta
aaagtaaGAGAAATACTGCTATTGGTAAACAGGTTGTAATCGGTTTCTTT
AAAATCCTGATCGGATTTCAgcaaacgaaagtgaaagtgtcgAAGTGAGT
GGAGTGCCAAAAACAACGTGGTGGACCAAACCAAAATTTCTTCAGATCAC
ATCAAAACTCACCATATCTTTGACTTGATGAAATAGTTACAGTAAGTTTA
GTTTAAAGATTACATACTCTCAGACTTCATCTTCGAATTGACCCAATTAT
CTTGCTAAATAAACATAGTCTTTGACTTTCtagcgcacaacaagattctg
ttgttgtttttccGCCGCGGGAGGACAGGAGGACTATTTTCTTCAGACGG
TTATTTTTCAAGCAGCTTTAGAGGTTTAACGTGTGcataagaaaattatg
accagctgttatcaggttagcttACAATGGCATTAACAAATATTTCTCAC
CTGACTCTCCttgttgaaaattgaatagaccttttttcaatcaaagaggc
gggccaccctgttgaataattatgtagtccagcagaaaaacaatgatata
tacacccatgcataattattacaatatgcatgaaacagtaattatgcatt
gatgtatcattgtttgtatggctggactacatacaccgtagagtcgttta
atatcgacatgcgtcttgttatttcgacatagctgtaggctggtcttcga
aataaaaaatcaaacataaacaaatacatactgtgagtggtcctaaatcc
gacagccctgcctaattccgacaccccaaataaatattatgaaaaaaatt
ctatgtttacaaacatttcacgaccctcgacatgacccgagaattctcgg
gccaaaacttttattggaattcacgtaaagcccgagtatggcccgagctg
gcccgagaatttgggccgtgttcgggccacacgcgggccatNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNtcatataaatattaaatgtcttatttggtatgaaaacata
gttataaatatacttagggtggaaatatttgctagtaaactggtcctggt
tttaaactgaagcatgtccacgggaagctcgtaaagttttttgagcgata
taaacaaaacagacaaatctttttttgtactattttatttgactggacat
gctgaatcaatttaacatttaacatggcccgaacatggcccgaagaggcc
cgagaattctcgggccatgtcgagggtcgtaacATTTCACTAACATTtcc
ttctccaagttgaacaataaactattgcaaggactttataatgtcaagat
gtcaattaatgtgatcaaaaaagtgcgagttgtaaaaatgATTACCTCTA
CTATTATTCTAAAtctgttgctcgtgtttaaaacattaacaattttgtaa
taaaaaattatgttttgtacaagaagcaattattgtaatTTGGTTCAAAT
CAacgtgtatcaaatctctcagtttagttgacactttggtatctttattg
cgtcacagcgaaaggtttatttttattctagtttgtatctttgaaagacc
ccattggatttaggcagggctgtcggatttaggaccactcacggtaccaa
agttcagttaggaacatttggcgagttcctgtacgcggaataaaaaatgg
cgttcgtgtcttttcgcactttttttagcctagacgatgtagcaaacata
ctaagtataagcacactgtgcttttaactggctgacaatttcttttgcgt
cggaaaaactttttcaaactttcgatgattgatcaaactgttacaatgaa
aattatccagcgcattttttatcttcttaccttcttcatctttaatgaag
cactcgaagtttactgaaagtaagCACATAAGGTATTATTATAATTAATG
ATATTCATTTAAACACGCTTCGttatgcgctgcggtggagtgcatgacgt
aactcgcgcggcaactaactcgccttctgttggaagatcatattgggcgt
tttggcgttttgcgagcgcctttgtctttccgcaactctttccaccattt
tagatggccttaacaatagatccaaatgggcgccataatcttggaagatt
aTTTGTTTTCgtctccagctttgggaagtagcaatgtttttggttgtttc
caatggaaaatggtaagaaacttaagtttacaagtgtcatttagtttttg
ctggcttatagaatggcaggatcctggatggtttccctaactgaagttat
caatcaatcactaaattgtactcaccctatcacgtcacagattgttgaaa
cgtaagaaacgtgaagtggttttttttcgaaaagaaaactttaacgctGT
AGTCACtactaaaaactaattagcatgctttcattcaACGGAACGAAGAT
ATCGAAAtgaaaacaacattttgcacgcaagGAAtttttgaatagacctt
tttaccgtgaaccgaaaataataaaaagaacccggtttccttttgaattt
aatttgaccgccatactggccatcccggcctagagcgtgtgtttttgata
aataaggaaggggaaaccaggctaagcgcgaaaattatttttatcacgtg
acttgaagcgtaataaagttgtaaaattttaatgatggtcacaagaaagt
tacgaggaagtttgcatgcgtttcgtgtgctgtgtaaaactgcttataat
ttggctgttttttttttaattgaaaggattgaaaTGTTTATCGagcttct
agtttgatggatgaacttgtttgataagaatgataccaagaatttcattc
aaggtttgttttgataattttacagatccggtgtcgactttaaaagacgc
atgtcgatattagacaaTTCTACggtaattattcaacagggttgcctctt
tgaaaaaaggtgtattataaaGTTTTAGGTAAAAGTATGTTTAAGTTTTC
TGTGTTTGTATAGACAGTCAGGTCGCTGTTCTCAAATTTAACGATACAGC
TCTCTTTTCTTGAAATGCTATGGAGATAATAACACATTCCCGCAAATCTA
TAGAAAAGGGTTggatatagacctttttttaaaggttaacagaaaaaacc
actgcttcctttgttagagataaattgaagcaATTCTACAAGATTTAGAC
CGATTACCTCGCGAGGGGTCAGGGAATTACCAGTTATTATATCCGGATAG
CATtttacaaaaacattattttcaacCTCTCGATACTAACTCTAAGGGTA
TAACAAATGGAACAAACAATATATCAGTAACAGTTAATTGTTAAAAGTAA
GTTTGTTAgttaaattttaaataatttgggtggcaataaataaatataaa
taataaataaataatagttTTATAAATTCTCGCGGCAGGCacagaatgaa
aaaaatatcttcATAATTTCCGCATTAAAATGACATAATGTATTGGAGTT
GATTTGAAATACAATGTAAGCTCTCTCCTTTCCACTCTGATGAACTCCTC
ATTCCCGCATTAAGTTCTGCATGCGAGAATCGAGACGGAGCTGCGCAATC
AAATTCGTCATTTTCTGTTTCTCAGATTTTCTCATCCCCTCATTTTTTAA
TTCTCTTATTTCTTCTGCatctaaacaaaaagaaaagttaGAATTAATAg
cgcaaaaatcttcatttttctagTTCCTAGTCCCGTGCAAAATGCAAGGG
TTGTTTTCAGTAAAACCTTacgtcactttcattttcaacacCCTGTGCAT
TTGCAAGAAATCGCAGGCGCCGAAACCCCGTGCAAATGATTGCAAGGATT
TGTACTAGAGACTGGTTAAGAATCAAGGTAATAAGGAGGTCCGTAAGAGA
TGTCTCAGATGACTTTTAAAGTGAATTAGAGGACtgagatattgaaaata
aagttttcgaaaaatacCGCCTGGATAACCATCCGGGTGTTTATAAATGT
CGCTCCAAACATTTCGACATTTAGGGAAGAAACATAAATGTGGATTGGTT
TTCAAACGCGTTCTTTCTCGAAGTAACGGTAAAAACACTTTCCACATACA
CTGCATACACGTAAGTACACTTGACAAGCTATttacaaacattgaaaatt
atCCTATTTCTTACACATTTATTAAATACAAGAACAATAGACGGCACAGA
ACTCTCACGGGACTAACAAAACATTAATTATGCACAAATGACGTAAAGTT
CCTAAGACAATCAATACACTAGAGACATCCAAAATATAATAACAAACCAA
TAAACCTATACAAAATGCAAATGCTATAGTACAATGGAAACGTAAAAATA
ATCTAACCAAAACTACTGCCTAGCGGCAGTAACACTCCCCACCGTCAAGA
TATTGGCATCTTGACCAAACTGGTACCCAGTACTCATAACTGTAAGCAAA
TATAAAACCACATTCGGGATTAACCCATTGATTAGTCCAGATAACGAAAC
GTAAGTCCAACGGGGATAGCCAATAACAACCTTTTGAAAATCTGACAAAA
GGAAGAACGTCCAAAAACTTCTCAAAAACAGCTTGCAATAAAAGTTATTT
ACCAAAAAACGTTTCAACTGAAGTTTGCATTTCCTTTTTGGTTTGTAGTT
TCGGGCATTTAGGCAAACTGCAAGGTTAGGGGAACTGACGATAGGATGCA
CTTTTGATCTTTTGGAAATGAGAGGAGTTTCATTATCGAAAGTTCGttta
tctttaaaatttctACTCACATTTAACATTGAAACATTCAGCTTCTCTGC
AATACGTGCAACACGACGAGGTTGAACTTCTTTGACAACCATGTGATGAG
ACAAAATTTCTGGTTGAACTTTTCGGACGATCTCGTGACAAACATTTTCG
GACACTTCAGTAACGACGACAACATTGGGATACGACTCGACACTCTCGAC
CACGCGAGAcaaaatttcttgttttggCTTTCCAATAGTCACACGAACAT
TTTTGACTACTTCAGAAACAACACTGACTTTAGGGTAAGGTAGGAAGGAC
ACTTTCGACCATGTGCGACTCAATTTTGGGCTTACAACTTTTAGTAACCA
CGCGACAAACAGCTCTATCAACAACTGGAGAAACTACCAAAATTTGCGGA
TAAGGATAACTTACGGCCATGCTACATTCAACACGATCCAACTTTGGAAC
TACTTTCACCTTCTTGAAACTAAGGGGTGCTGAATCTATAACATCTCGAG
CCGCACCAATGAACATATCTCGAACTGCAAATTCCTTTTGGGTTTCCTTT
TCTCCGTACACCGAGAGCATCAGTGAGTAATTTCTGTCATAAAGTAATTT
AAAATCATTTGCCAAACCTGTAAGTCGTTTCGATTCATGTTGATGAATAA
TTGGGTCAAGTTCCGGATCAGGATTGACACCACTGTACACACGTTTTAAA
AATCTTGTCGACTCGATCAATAATTCGACCAACTTGAAACGTTCATTATT
AAATCCATGAATTGGGTGATTGGCCATCTTTATTTCAGTTCCGATTCTTT
TGATCTCGAAGCAAACTGATCAACTTCTAGCATCCAATATACAATCATAC
GAAGCTGTCAACATACACAGTGCACGTCAGTGTTTTTACTATAAATGTCG
CTCCAAACATTTCGACATTTAGGGAAGAAACATAAATGTGAATAGGAGAC
AGAAATGCAGATGAAACAGAAATACAGATACTAATTTAATTTACTTGTGA
GTGGAGAGAACGAagatattttgaataatttgactgGTCGAAATATCTCA
GCCTTAATGGACAAAAAGGAACCTAACCTAAGGAAACCAAACAGAAAATG
GAGAAcagaaaatgtaaaatgcaAACACCAATTCTTGAACTTAAACCAAC
TTAAAATGtaacaaaaccaaaaagaacCGAAATAAAACGACAGTAAATTA
AATTTTAGTAAAACGCACCTCTCACACACAAGACACTCACTCACGTCTCT
CAGTGTTGAACTAATTCCTATCTACCAAATTTACAGTTAATAAACATATC
CTAATTTCCCTAGAGGAATTACAAATGATATATAAAACGTATAAAACGCA
ATTTGGGGATACAAAAGACACTTAAAACAAAAGGGACACTAAACAAAAGA
GGACTCAAGAGACACATGAAAACTGAAAGAATCTACAGGGAATACTAATT
AAAACACAGAAACATTAACAACACGGCCAATCAAATGTTCATAACGATGG
AGCACTCTCTCTCCATCAAcagtgtttttgataaatagaTCTTAGCGCCC
GGAACACCCGGATTACGCCCGGAATATTCCGGGCGGTGTCCGGGCGTGTT
CGAgggtcctgttgaataattatgtactccagcataaaaacaatgataca
gccacgcataattactgtatcatgcatattttaaaaaccatgcatggctg
tatcattgtttttatgctggagtacataattatttaacatggctgcctct
ttaaaaaaaggtctattatcacccttttattttgaaattgaattctTCAG
TAAAACAATGAAACGTGCAATTGAAGTAAAGATTACGGGTGAAGCGAAGA
ATGGAATTGGATAAAATTACGACTTCCTGACTCAAAATAAGTCTGGAAAA
CAAGGCATATATGCCAGATATATCCAGCGTAGACATTCAATCTCAAAGAC
CTGGTTCAAGGCTACGGTAAAAACTATCTGGTGGCATATTCAGTGCTCGA
ATTAACGTATTGCGTTTCACGATTCGCATTGCGTTTTTGgaaatgtacga
agcaaaaattaaaaaaactcagCAAAATTGCGATACAACATATCTAAAAT
TTTACAGCTActaaatcagttttattgaaaaacatttATAAGAAGCTTCT
TGTTGAGCCTCCAAGCAAATAGAACTGTTATTTGGCTTATAAATTAGTCT
ATAGAATGGAAAATGCATTGTATATATTCAGATTTAGCTCACTCTGTTTG
CTAAAAAATGCAATGCACTTTTAAATcgtaaatttttggtttttaggaAA
TATGAATACCTtccagtgaacataaaatattcttacgaaaaagtctgaaa
atttgttaaaaaaagtatattggccaaaattgacattttcaatttttgcc
tgtCGAAGGTTGGAGCTTGGGGGGTACGCGCAGCCCAGTacattacaggc
aaaatttaaaaatataaattttggctaatagacttcttaaaaaggatttt
gagactttttcgtaataatattttatgttcactggaAGGAATTTAttcca
aaaaccaaaaatttgtgaattttggcaatttttttttccgatgacgtcat
cgttttatgacctcattttgccttatttcctttcctaatatctcctgata
tattcattttcagatataggttgtgacctttttcttaatcagtttttcat
gctctttcgaatggaacaaaactttttcaattttgacggctttttatttt
ggttgccttAGTAACTAATGACGTCAGTTTTCATGGCAACGggtggtcac
acccggccccaGCCACCtctatttgatttattttcatgaTTATTACCAGt
tttttttgttgcatttttttacaaattttctttctttcattgaaattcaa
cttttttttataaaacaaaaggATAGACTGATTTTGAACGTTTTTGAGTA
CTATTTGAAAGTAACTTTTCTTTTCAATCAAtggagcataacttttgatc
taatgaagcaagcttgataaatgacccatcaaaatttaagtcgaTATAtc
gttttttaatgaaagaagagtcattctttcaaaaattttataactTCAGT
AAATTCACttgaaagagagaaacttttttgtgactCAAAGTTCTCTTTAT
ACCTTCAGACCGAAGATAAAAGACAATCATGATCTGATTTCAGGTTACTT
TTAGCATATTCTATTGAAACTgatcatttagaaacaaaacaaCACTGTAA
AACAATGACTATGGCAAGTGAAAAGAAAGGGAAGAAAAGAAGCTTCAAAA
ATGAGGGGCACAAATCGTCAAAGAAGCCTTTCCTAGAGGAGGAggttgaa
aataagattttagcTGATGTTGACCAAGATGAGATTGACGAAGTACTTGC
GGCACAAGAATTTCCAATGCAAAAAgtatcaaagaaaaagaagaaagaat
ctGTAACTGAAGTAGAATCAGAACCAATGGATGGTTCTAATGAGACACCA
CCAGCTATTGATTATCTGTTGGGTTGGAAATCTAAAGACAAAGATTGGAA
ATTTAGAAAGTTGCGACAAACATGGCTCTTGCAGAATATGTATGATAAAG
AAAAGGTTGGGATATAGTTTTGCTGCTTTTAATTCCTACTTTTAACTTTG
TGCTTGAAGTTACAGAATACACAACTTTGTCCCTTGAGTTGAACATTTTG
TGACTcaataataattatttttctattcGTTAAAATCGTTTTACCAATCT
ATAGTATTCAAAAGTTTTGCCTTAATCTACTGTATTTTTATTAAAGATAA
TATTTACAGATTTCCTTTACAGATTTACAGAAACCCTTCGTGCTGTTAGA
ATCTTAATTATCAtctaagtttgaaattattactCTTGTTTAAGGTTTCC
AAAGCGAACTTTAAGATTTTGTTGGAATACCTGGAAGATTTGAAAGGTGC
AGCTAGAGAACAAACTTTAAAAGAAGCAAAAGAATTTGTTGAAGCTAACG
AGGACAATGaaggtacacatttttttttaatcttaaatGTTCttgaacat
ccaaaatttttgaagcattgggatgtccttaacttttttcgttttttagc
ctaaaaaagttcttaatatgttcttatttttgccattttttgagtacctt
aagggaacttattatGCAgtaactaattttggcggatttggcgaatttag
acgaaattggcaaaaattagttaccgccaaaattaaataatttgctcact
cgccaaaataagttcccgtcaaagttaaattttttgtttccttgcctaaa
taactcCTGAAAtccatcaaaattgctcaaaataaggcaaaatagaacag
atttacgctgtcattcgccaaaataagttcccgccaaaattaaaaaattt
taggatatttgctgcccgtcaaaattagttcccgccaaaaaaagttccct
taaggtatttttgtccattttcctaagaaactcAGTGTTTTAGAGTCAGT
AAAGCCttaataaaatgttcttaacttgttcttaatattttggccatcga
agccttatgttcttatatagtttgttcttatataaaaaaacgtgtaatct
aaaaagtttattattttggtttgtacTTGATTAGAGGCCATCCATAttgt
acgtacgcagtgaaggggggagggggagggggagtAGCAAAAGCGTACGT
CTAATTTGTTTAAATGGCGTcgtttctattgttctctgcgtacaagggga
gAGGAGNCTCTCTCAATAACAATTACAAAATGCAAAGAGTTGTAATGTAA
TGGTCACACAGTTGACACTCAATGTACATCGATTCAATGTTCATAGATGC
TTTACAAacgttgtttttcattttcgtgaTCAATGGACATATATTTTATc
acaaagaaatatattttattacaaaatatGATCAAAAGTAGTGTTTATCA
ATGAAGGTATAGCTGTAGACTTAAAAAAGACCTGTTAGAATAATGTTAGA
TTTATACAGGTTAATTccttaaaggccggtctccacttgcgcacgctgcg
atcgcactttttggcttcaatcctttttgcttggaaaaaagattacgtca
tgaaaatGTAGCACGCGCTCGAatgtcaacttttttcaaccgttacgtca
gatcgcgccaatggagttgcttcatttttcttttgacgaatagcgtggaa
gctttgctcgaaaaagtgcgatcaaagtgcgcgcaagtggagactggCCT
TAATAGGTTGTGTGACCCCCGTGGTTTTTAAACTAAAACGCCAGATCAAA
AGTGATAAATATCACCAGATTTCCAACTAGATGCTTCAATGTGAACACGC
AACAATAAACATATAGATTTTATCCATCATTTGAAATACGATACATATCT
AAAGGTACAACTTTAATTTGCCAAGGAAACACCCTGTGTCNTAAGATTGC
CATCTaagccaaaaaattaaaatctgagACTTGGATTAAGCTCTCAACTT
ATTTTTACATTTCAGGTAAATATCAGCCTCGTgattttatgaaattgttc
tcgtacaagaacttttgattttttttctaatgtaCACAGAGATCTACTCG
CTTTATCGACTCCAGTCTTCATTTTTAGAGTtcgataaaaatgtttttca
atctaactttttaactttttttaactaattcgtgttaataaaacgattag
taatattcgtgtaataagtgtaataaggtatgtCACTTGTAACCAATCAT
AGCCCTTGGGTCTGtgaatgtcagaagacattgcagtagTCATTAAGACC
TCTTCCTAATCACGATGTCACGTTCAATAATTATAAGCTCCCACTGACTA
CACtgcagcatcaaaacaatgataagaaaatTTAGTGCACGCTAATTAAA
TGCATCAGTGTGTTATCAATTTGACATGTTTCAATACTGGAGTTACGACG
TGACATCGTGATTAGGAAATGGTCtattaggcgaaaataaaaaatgtagt
gtttccggaatgcgggtgaaggaaaaaagctctcatgcggccggccggaa
aactttattttttgcttttttgataaCTTAGCCCTGAATACTAAGGTATC
GACTACTAGCGAACagaacttgatttacaagcgggaatatctaaccaaac
gacgtttgataagttgaacggtcaacttgattttctttatgattaaccat
atagatgaaccctTAGTTTGCGGCCGGGTCATAAATATTATTAAATTTAG
CAGTCGATAATttattctttattatttttctgcTTTTAAGAATGCACTGA
GAAGAGAAAATTGAAGCGATCGTTAAACGTCCTCAAAGTATTGACCTGAT
TCAAAAGCTGAATATACAGTACAAAACGGTGCTGGTGAAATGACGCCATC
ATGATTGAGCAACCCCTGCATTTGGCttccggaaaaagaatttaCATCAA
ATGGTTTAGAGACCAATTTTGGAGGTTAAAATCCCTCTGAATCTCTTTCA
AGGAAATAAAAGGAAAGGGGGAATCGTGTTCATTCCTCTCTCAACAATTA
CAAAATGCAAAGAGTTGTAATGTAATGGTCACACAGTTGACACTCAATGA
ACATCGATTCAATGTTCATAAATGCTTTACAAacgttgtttttcattttc
gtgaTCAATGGACATATATTTTATcacaaagaaatatattttattacaaa
atatGATCAAAAGTAGTGTTTATCAATGAAGGTATAGCTGTAGACTTAAA
AAAGACCTGTTAGAATAATGTTAGATTTATACAGGTTAATTccttaaagg
ccggtctccacttgcgcacgctgcgatcgcactttttggcttcaatcctt
tttgcttggaaaaaagattacgtcatgaaaatGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046762-exon-scaffold_117-1491911889:57181..57332 | TCONS_00046762-exon-scaffold_117-1491911889:57181..57332 | Clytia hemisphaerica | exon |
| TCONS_00046762-exon-scaffold_117-1510915933:57181..57332 | TCONS_00046762-exon-scaffold_117-1510915933:57181..57332 | Clytia hemisphaerica | exon |
| TCONS_00046762-exon-scaffold_117-1575043694:57181..57332 | TCONS_00046762-exon-scaffold_117-1575043694:57181..57332 | Clytia hemisphaerica | exon |
| TCONS_00046762-exon-scaffold_117-1491911889:73489..73935 | TCONS_00046762-exon-scaffold_117-1491911889:73489..73935 | Clytia hemisphaerica | exon |
| TCONS_00046762-exon-scaffold_117-1510915933:73489..73935 | TCONS_00046762-exon-scaffold_117-1510915933:73489..73935 | Clytia hemisphaerica | exon |
| TCONS_00046762-exon-scaffold_117-1575043694:73489..73935 | TCONS_00046762-exon-scaffold_117-1575043694:73489..73935 | Clytia hemisphaerica | exon |
| TCONS_00046762-exon-scaffold_117-1491911889:74225..74342 | TCONS_00046762-exon-scaffold_117-1491911889:74225..74342 | Clytia hemisphaerica | exon |
| TCONS_00046762-exon-scaffold_117-1510915933:74225..74342 | TCONS_00046762-exon-scaffold_117-1510915933:74225..74342 | Clytia hemisphaerica | exon |
| TCONS_00046762-exon-scaffold_117-1575043694:74225..74342 | TCONS_00046762-exon-scaffold_117-1575043694:74225..74342 | Clytia hemisphaerica | exon |
| TCONS_00046762-exon-scaffold_117-1491911889:76621..77216 | TCONS_00046762-exon-scaffold_117-1491911889:76621..77216 | Clytia hemisphaerica | exon |
| TCONS_00046762-exon-scaffold_117-1510915933:76621..77216 | TCONS_00046762-exon-scaffold_117-1510915933:76621..77216 | Clytia hemisphaerica | exon |
| TCONS_00046762-exon-scaffold_117-1575043694:76621..77216 | TCONS_00046762-exon-scaffold_117-1575043694:76621..77216 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_117 | supercontig | scaffold_117:57181..77216 + |
Blast
BLAST of TCONS_00046762 vs. Swiss-Prot (Human)
Match: CG050 (Uncharacterized protein C7orf50 OS=Homo sapiens GN=C7orf50 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.368e-17 Identity = 40/93 (43.01%), Postives = 61/93 (65.59%), Query Frame = 3
Query: 498 AIDYLLGWKSKDKDWKFRKLRQTWLLQNMYDKEKVSKANFKILLEYLEDLKGAAREQTLKEAKEFV-EANEDNEECTEKRKLKRSLNVLKVLT 773
A+DYL W K K+W+F+K RQTWLL +MYD +KV +F LL YLE L+G ARE T+++A+ + E +E+ + + +R VL++L+
Sbjct: 102 ALDYLCRWAQKHKNWRFQKTRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEEGSDPPLPGRAQRIRQVLQLLS 194
The following BLAST results are available for this feature:
|
