TCONS_00046732 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046732
Unique NameTCONS_00046732
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length181

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046732 ID=TCONS_00046732|Name=TCONS_00046732|organism=Clytia hemisphaerica|type=transcript|length=181bp
CAAACCACGAGAAGTATAATTATGATAACTCCCAAGATTGTAAAACCGAT
GGTATATCTGAGTTTCCAACATTTGAATAAATTCCGGTTATCCTGTATCC
GACAGATATCTGAATCtgtattgttttctttttttcgtcGGTATTTTTGT
GTCGTTTATGACGCTCATTTGTGAAGAAGAG
Run BLAST on NCBI

transcript from alignment at scaffold_116:278709..278889

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046732 ID=TCONS_00046732|Name=TCONS_00046732|organism=Clytia hemisphaerica|type=transcript|length=181bp|location=Sequence derived from alignment at scaffold_116:278709..278889 (Clytia hemisphaerica)
CTCTTCTTCACAAATGAGCGTCATAAACGACACAAAAATACCgacgaaaa
aaagaaaacaatacaGATTCAGATATCTGTCGGATACAGGATAACCGGAA
TTTATTCAAATGTTGGAAACTCAGATATACCATCGGTTTTACAATCTTGG
GAGTTATCATAATTATACTTCTCGTGGTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029817XLOC_029817Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046732-exon-scaffold_116-1491911889:278709..278889TCONS_00046732-exon-scaffold_116-1491911889:278709..278889Clytia hemisphaericaexon
TCONS_00046732-exon-scaffold_116-1510915933:278709..278889TCONS_00046732-exon-scaffold_116-1510915933:278709..278889Clytia hemisphaericaexon
TCONS_00046732-exon-scaffold_116-1575043694:278709..278889TCONS_00046732-exon-scaffold_116-1575043694:278709..278889Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_116supercontigscaffold_116:278709..278889 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046732 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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