TCONS_00046721 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046721
Unique NameTCONS_00046721
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1831

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046721 ID=TCONS_00046721|Name=TCONS_00046721|organism=Clytia hemisphaerica|type=transcript|length=1831bp
CTATggcgaaattttcgattttcgaccCTTTCATACACTTTATAAATGGA
AATGTTGGCTTGGCTTGAGAGTACGCCTTTTGATCTCTTAACCCCAATTG
GTTCAAACGTTAGgttcagaaatttttttattgcataGTTTCATTTTGTA
TCTACTTTAATGatgttttaacattttttagagAGTGTCATGCGAATCAT
TCAAATATTTCAACGAAATGATTGAGACTTATTGCACCCAACATGACATT
GATTTGAAATcgttcatcgaagataaaaagaACAGAAAGGATAATAAGAC
AATGAGAAGCCACCAAAATAATGATAAATATTCAAGCTCCTCTGCTTCTG
CAGTTACTGGAAATTTTAGGCACGATTTTACATCGGATTCTCAAACAGAA
GGTTTCATGAGTTTTGAGGGAAGCTCCGGTCAGACATCAAAGAACCTTGA
TATGCCTTTCACCTCGAATGCTAATTGCCACGAACTCGacacaaaacctt
taattagcCAACAGACCATGAATCAGGCTATAAATATAAATCTTAATTCA
GATAAAGTTTTACGAAGCCAAAGACCTCTTGAAATAATGACATTTTATCA
GCTTGAAGAATTATCTGGTATTGTGCCTGAAAGTGTTATTGTCGCTTTTC
AATACGAGCAACGAAAGTTTTTAGAGAAGAACTTGAGGAAAGAATTGAAG
AAAGCCTCGAAGGGAGCCGAGAAAAAGATTGCAAGACgaaagATGGTTGA
AATAGCCAACAGACTCTTCAACGAATTAGTTGAACAATATTGTGTTGAAA
ACAACATCGACCCAATGAAACTtctcgaaaacgaaagcgaaatcGATCCG
AAGAAGCATCCCAATGGATGTATGCAACTGGCCAAAAATGTTCATGTGGG
GTCTGGGATTGATTGGAATAGACTGCCGAGAAGTAAAGAACCACTTCATT
TTATGCAATTGTACAGAGATTTAGAAATGAAAGATACTATACCGATCGAT
GTGTTCAAAGATTGTCAAAGGAAAcgcgaaaaatttaaacaagatCAAAA
GAAAGCAGTTCAGAAGCACAACCCTATAACTACACATAAAATATTGTGCG
AATCGTACAAATATTTTAACGAACTGATCGAAGAATATTGTCAACAAAAT
AACATCGATATGAACCAAATGATTTCAAATCGTGAGAAATCGTGGGCTGA
AAAAAGGAAACATGTTTTcgataaaaaacaacaaaaaagaaagggGAAGA
AACAACCAGTTGCCAATGAAAGTTTAGCAGGATATGATGGTTTTCACGGA
TATAACGAAGCAAATGAAGATTTTGGAGAGAACGAAAGATTTGATGAAGA
TGATTCGTTTGCTTTTGAAGACGAGGCTGATACAAGTGATCGCTTTTCCA
ATTTTTactgaaaacattttttgagtgTAATTAGTTGTACAGCTGATTTT
TTCGATGATGttttactattcgataggctcccttatacgttaaagctccc
ttattcgacgaaagtccaattccccttgaagatcgaattagagagcgtca
actgtatcttCTTATGTTATTTTCTTATCATTTGGTTAACTTCGAAACAA
ACTACTTTATTACATGAATAACTATAGAAGtataacggccttgaaattaa
cacacATCAAGTTACTTAACTCGAATGAGCAGATGTAAACTTTAGAGTGA
GCCTTCTTCggtgtttttattaacacgaaaattttcaattcgtgttaatt
tcacgtctcctaatattcatgtaataaggtagaTTTGCTGCTAGATTTTG
ATACATATGTAAGATACAATGCACTCTCGCT
Run BLAST on NCBI

protein sequence of TCONS_00046721-protein

>TCONS_00046721-protein ID=TCONS_00046721-protein|Name=TCONS_00046721-protein|organism=Clytia hemisphaerica|type=polypeptide|length=397bp
MIETYCTQHDIDLKSFIEDKKNRKDNKTMRSHQNNDKYSSSSASAVTGNF
RHDFTSDSQTEGFMSFEGSSGQTSKNLDMPFTSNANCHELDTKPLISQQT
MNQAININLNSDKVLRSQRPLEIMTFYQLEELSGIVPESVIVAFQYEQRK
FLEKNLRKELKKASKGAEKKIARRKMVEIANRLFNELVEQYCVENNIDPM
KLLENESEIDPKKHPNGCMQLAKNVHVGSGIDWNRLPRSKEPLHFMQLYR
DLEMKDTIPIDVFKDCQRKREKFKQDQKKAVQKHNPITTHKILCESYKYF
NELIEEYCQQNNIDMNQMISNREKSWAEKRKHVFDKKQQKRKGKKQPVAN
ESLAGYDGFHGYNEANEDFGENERFDEDDSFAFEDEADTSDRFSNFY
Run BLAST on NCBI

transcript from alignment at scaffold_116:853512..861300-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046721 ID=TCONS_00046721|Name=TCONS_00046721|organism=Clytia hemisphaerica|type=transcript|length=7789bp|location=Sequence derived from alignment at scaffold_116:853512..861300- (Clytia hemisphaerica)
CTATGGCGAAATTTTCGATTTTCGACCCTTTCATACACTTTATAAATGGA AATGTTGGCTTGGCTTGAGAGTACGCCTTTTGATCTCTTAACCCCAATTG GTTCAAACGTTAGGTTCAGAAATTTTTTTATTGCATAGTTTCATTTTGTA TCTACTTTAATGATGTTTTAACATTTTTTAGAGAGTGTCATGCGAATCAT TCAAATATTTCAACGAAATGATTGAGACTTATTGCACCCAACATGACATT GATTTGAAATCGTTCATCGAAGATAAAAAGAACAGAAAGGATAATAAGAC AATGAGAAGCCACCAAAATAATGATAAATATTCAAGCTCCTCTGCTTCTG CAGTTACTGGAAATTTTAGGCACGATTTTACATCGGATTCTCAAACAGAA GGTTTCATGAGTTTTGAGGGAAGCTCCGGTCAGACATCAAAGAACCTTGA TATGCCTTTCACCTCGAATGCTAATTGCCACGAACTCGACACAAAACCTT TAATTAGCCAACAGACCATGAATCAGGCTATAAATATAAATCTTAATTCA GATAAAGTTTTACGAAGCCAAAGACCTCTTGAAATAATGACATTTTATCA GCTTGAAGAATTATCTGGTATTGTGCCTGAAAGTGTTATTGTCGCTTTTC AATACGAGCAACGAAAGTTTTTAGAGAAGAACTTGAGGAAAGAATTGAAG AAAGCCTCGAAGGGAGCCGAGAAAAAGATTGCAAGACGAAAGGTACACGT TTTTTTTAAGAACCCAGCTGTCACACAACGTTGTTTCAACGTTCATTCAA CGTTATGCGGACGTTGTGAACGTTAGATAAACGCTGAAACAACGTTGCGT GTCAGCTGGGAAACACACTTTTAAGAAACATGAGGCTCAGAATGCTTGAA AACTAAGAAACATGAAGTTCCAGAAAAATACTTAAATAACAGCTAGAAAC ATTTGAGAAAGTCAGAAAATCACTATAGAAGATAGGAAAGTGCCGTAGAT TAGTCTATTAGACTATTGTATTAACGACATGCGTCCTTTAAAGCTTGACA AAGTTTATAAACATGTAAGAAACATTTAAGGCTCAAAAGGCCGATTTTTG AAGAATAAAACTAGTTTCTTAAAAAAAATAAATATGTAACAACAGAACAC TCGTCATTGGCCGTTTTTACAGTCGAAATGAATCATGGGTAATCTGAGGA CTAATTGTGCCTCCATAACGGCTTCCCCTTGGCTAGACGCAAAAACATCC AAAAGCTTAAACCAACAGAAAGTTTTTGTAATAGTGCGGCGGTCCGGATT ACCCATGATCCATTTCGACCGTGAAATGGACTGTAATTATCCGTGACGAC TAGTCCATTCACTAAATTTTTGTTTCATTTCTCGCTTTTTCTACGACCAT TTATTGTTAATTAGTACCGTTGAAAAAAAAAATCGATTCAAAAGAGGAAG GAATCAGTGACGTTTTAAATTTGATACATGGGTACTTTGAAATATTTTTC AACTATTTTTTTAGAGATATATGCACGTTAAGTAAGTGCCTTTAGATAAA ACGGGGTTTCCGATTCCAACGAGCAAGAAATTTATTACGGAGAAAAACCT AGTACTACTACTAACTGCCCTTAAAGGTTTTGTTTTTACATAAGTGTTCC CGTTTTATAATAGACACATATTTCATATCAGGACAGTGTCTTGCTATTGT TAAATTATGCTTTTATAAGGCGAGACCGAGAATTTAATTTTTCAATTTAT CCATAAATTCAGACTTTCTGTGCCTTTTTATTTTCTATTTTGCATTTTTT GTTAAGATTTCCCTACCTTTTTAGGAGATTTTATAGATGAAATTCTACTT TTATTTTTATTTTTTGGCCGACCGACCGACCCTCATTTTTGGGTAGCTTG GCCCGTAAAACAACCAACTAAATTTGGCCTCGCTTAAGCAAAAAATTGTT TTTCTTTTCCTCTTTCTGATCAATCTTGTTCCACATCCACGTCATTACAT TAAAATTGACGAATAAGCAAACGTTATCACTCTTATTCTCAACTTCAGTT GAGTTAGAATCTGAGAATGTGTGTGTCTTTGTGTCTGTCTGTGTGTATGT CCCAAAACTTTGTGGCAGCCTGGAGNTTTCGCAAATTTCGAGTCCCACGT AGGGTCCATTTTTCGAACCTCAGCGGAGCACCCCCGTCGGTCGACAAGGG TAGTACCCCCCCGGGATTTTATAGATGAAATTCTACTTTTATTTTTATTT TTTGCCGACCGACCTCATTTTTGGGTAGCTTGGCCCGTAAAACAACCAAC AAAATTTGGCCTCGCTTAAGCAAAAAATTGTTTTTCTTTTCCTCTTTCTG ATCAATCTTGCTCCACATCCACGTCAATCCAATGTGAAAAAGCTTGTACA TTAAAATTGACTTATAAGCAAACGTTATCACTCTTATTCTCAACTTCAGT TGAGTTAGAATCTGAGAATGTGTGTGTGTCTGTGTGTGTGTCTGTGTGTA TGTCCCAAAACTTTGGGGCAGCCTGGAGACTTCAAAAATTGTTCGATTTG GCTGAAATTTGGCACACTTGTTCCTTGGATGATTATCTGGGGGTATGTTT TTCATTTTTTGAAAATTTTGATTTTTAGGGCCTGGGCACGAGTTTTTTTG CCAAAACGAGGCTAAAACTTTGGGGCAGCCTGGAGACTTAAAAAATTGTT CGATTTGGCTGAAATTTTGCACACTTGTTCCTTGGGTGAATATCTGGGGG ACTTTTTTCATTTTTTGAAAATTTTGATTTTTGGGGCCTGGGCAAGAGTT TTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGCCTGGAGACTTCAAAAA TTGTTCGATTTGGCTGAAATTTGGCCCACTTGTTCCTTGGATGATTATCT GGGGGTATGTTTTTCATTTTTTGAAAATTTTGATTTTTAGGGCCTGGGCA CGAGTTTTTTTGCCAAACCGAGGCTAAAACTTTGGGGCAGCCTGGAGACC TCAAAAATTGTTCGATTTGGCTGAAATTTGGCCCACTTGTTCCTTGGATG ATTATCTGGGGGTATGTTTTTCATTTTTTGAAAATTTTGATTTTTGGGGC CTGGGCACGAGTTCCATGTCAAAACGAGGCTAAAACTTTGGGGCAGCCTG GAGACTTCAAAAATTGTTCGATTTGGCTGAAATTTTGCACAATTGTTCCT TGGGTGAATATCTGGGGGTGCTTTTTTCATTTTTCAAAAATTTTGATTTT TGGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCATTGGGTGAATATCTGGG GGTCTACAATTGGGCCTATGAATGATTTGAAGCCACTGAAGTTGAGCCCA GTGCGTTGCGCACGTTCGACTATTTAAAAACCTTTAATTAATAGAAAGGA CAAACTTTTCATTCAATTACATTCTTTTATGCAATTACTACCCTCTTCTT ATCAATTTATTTACTGCATCAGTGATTCCACTTAATCTTTTGTGTTAAAA AATGTGATTGGCACATATTGTTGCTCCGTAAAAGTCAAATCAACCTTTTC TGTCTCTATCTAGATGGTTGAAATAGCCAACAGACTCTTCAACGAATTAG TTGAACAATATTGTGTTGAAAACAACATCGACCCAATGAAACTTCTCGAA AACGAAAGCGAAATCGATCCGAAGAAGCATCCCAATGGATGTATGCAACT GGCCAAAAATGTTCATGTGGGGTCTGGGATTGATTGGAATAGACTGCCGA GAAGTAAAGAACCACTTCATTTTATGCAATTGTACAGAGATTTAGAAATG AAAGATACTATACCGATCGATGTGTTCAAAGATTGTCAAAGGAAACGCGA AAAATTTAAACAAGATCAAAAGAAAGCAGTTCAGAAGCACAACCCTATAA CTACACATGTAAGCAAAAGAATATTTTTACGCTGGTAATTTTTTTCACGG TTTATTGCAAAGCAATTTTTGTTTAGCCCCTGGTTGGCTCGAAACTTTGT AATTTATAGCCACCTTCACAAAAAGATTAATCTAAATGCGCTGACAAACC ATCACACTTTGGAGAACGTTTTACTTCAAAATAATGCCCCCTCGAATAAA CGCCCCTCCTTTTGAGGAAAATTCATTAAAGAACCCCCCTGCCAAAGAAA CACCCTTTCGAATAAACGCTTCCCATCTAGAAGGGGTCATTATTTGAAAC AGGTAGCTGTAAGGAAGTATATAATATGAAGGAAAACTTAGATATACGAT AATGATTGTATCCTTTTAATATACAAAATGATTTTGATCCGTTGCTACAG CCCTAACTTGAATAATAATGAGAAGACAAAATAAGGTTCCAATCATAGAG GTATAAAGAAAAGCAGGAGTTGAATGTGTCGGTAATTGGTCGTTAAAGTC TTTTGATTTCTTTTATAAAATTATCAAAAGAAATTCTAAGCTCGCCCGAT GAAATAAGACTTTTTAGTAGAACTCAAGTTTGCTCTGAACATTCTAATAA TCAGTATTGAAGATTCTAGCCTTTTAATATACGAAAATTAGATAAAACTT CGTCCACGAAACAAGTTTATGTTCCATTTCGCTATCCGTTCAATTTTGTT TTGNNNNNNNNNNNNNNNNNNTGAAAAGTTCTTTATAAGCACACACGATT TCAGACTCAATTTGTAGACATAAAGTCGCTGGAGAATTTTGGAGGAAAGT ATCAAGCAATAAAGTTCACCTTAAAGAAAACATTGATAGAAAAATCTTTT CATTTGATGAAGGATTGCCAAGTTTACAGGCCATTTTTTAGTCCAAATAT TTTCTTACACTGATGTCAGAAACAATGAATCTCGTCTCATCTAATGTCTA AAGCTTAAATGAGCCAATAAGATTTCATCTATGGATAAAAGAGCTCATCG AGCATGCATACATCGTAACTTTTTGGACCTACCTCCGGGTACCCCGGTGG AGGTTCTATAAATTAACCCATGTCCGTCCGTCCGTCCGTTCGTTCGTCCG TCCGTCTGTTACCAGCTTTTCTCAGGATTGGCTCATTATTTTTTTCTGAT TTTTTGCACAATGATGCAAAATGGCAATGCTTAAAATGTGTCGGAGCCCG ATTTTCGAAAAAATATTTATTTAGGCAAATTTGGGCCATAAACTGCCTAA AAATAGGGTTTTTCGGACTTTGTGCAAATTCCTGTCATTACTTTTTTCTG ATTTTTTGTATAAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTGAAGT GGTTTTTCCCGGAAAATTCTTATTCGAACTTAAAAGACGGATTTTCGTAT TTTGGGGAAATTCTCTTTAACAAAATAAGAAAATATAGCTTTTCTCAAAG TTGACTCATTATTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAA TGCCTAAAATATGACGGAACCTGATTTTCGAAAAAAAATTATTTGGGCAA ATTTGGGCCAAAAACTGCCTAAAAATAGGATTTTTTGGACTTTGTGCAAA ATCCTGTCATTACTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCA ATGCCTAAAATATGACGGAACCTGATTTTCGAAAAAAATTATTTGGGCAA ATTTGGGCCCAAAACTGCCTAAAAATAGGATTTTTTGGACTTTGTGCAAA ATCCTGTCATCACTTTTTTCTGATTTTTCGTACAAAGATGGAGGCAAGAT TCTCTAAAGAATGGCTGAAGTGGTTTTTCCCGGAAAATTCTTATTCGCCT TAAAAGACGGATTTTCGTATTTTGGGGAAATTCTCTTTAACAAAATAAGA AAATATAGCTTTTCTCAAAGTTGACTCATTATTTTTTTCTGATTTTTTGC ACAATGATGCAAAATGGCAATGCCTAAATTGTGACGCAGCCCGATTTTCG AAAAAAAATTATTTGGGCAAATATGGGCCAAAAACTGCCTAAAAATAGGA TTTTTTGAACTTTGTGCAAAATCCTGTCATTACTTTTTTCAGATTTTTTG TACAAAGATGGAGGACAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTC TTGGAAAATTCTTATTCGCCTTAAAAGACGGATTTTCGTATTTTGGGGAA ATTCTCTTTAACAAAATAAGAAAATATAGCTTTTCTCAAAGTTGACTCAT TATTTTTTTCTGATTTTCTGCACAATGATGCAAAGTGGCAATGCCTAAAA TGTGACGGAGCCCGATTTTCGAAAAAAAATATATTTGGGCAAATTTGGGC CAAAAACAGCTTAAAAGGTTTTCTGGGCCTGAATGGTTTAAGTGATTTTC GTATTTGGGTAAATTCCTTTTTACCATTTTACATTATTCAACACACAAGC TTTATTTTTCCATTCTGAATTTTTGTACAATTATTGTCACTTTTTTCTTA TTTTCATCTGATGTTAATCATTAGGTAGGTCCATTCAGCATGTTGCTTGT TTAATCGTAAGGTGAGCTTGGTTACAATAGCATACTTCTCCTGTTTCTTT ATACCTCTATGTTGGGTCTATGTTCCAATAGCGTATCGCGTTGAATCCAA AAAAAATTTTTGCAAATATTTATTCGTTTGCACGACACCCCTCATTTAAA AATTCCTCTTGTAAGTTCAAAACTTACAATATCAAAAAAAGGTAATAATT TCACGGTTTTCCAAGCATTTCGAAATGAACTATGAAATTGAGACCCGTAC AAATTTCTAGTTGACGATAATTCACACTGTTAAAGTGACCTTGGTTTTAA ATTATTTTATAAACGCCCCCTTCTAAAAAAAAACAAAAATTTTAATAAAC GCCCATTCGAATCGAAGTAATACGTTATTTGATTTTACTTTCTAGAAAAT ATTGTGCGAATCGTACAAATATTTTAACGAACTGATCGAAGAATATTGTC AACAAAATAACATCGATATGAACCAAATGATTTCAAATCGTGAGAAATCG TGGGCTGAAAAAAGGAAACATGTTTTCGATAAAAAACAACAAAAAAGAAA GGGGAAGAAACAACCAGTTGCCAATGAAAGTTTAGCAGGATATGATGGTT TTCACGGATATAACGAAGCAAATGAAGATTTTGGAGAGAACGAAAGATTT GATGAAGATGATTCGTTTGCTTTTGAAGACGAGGCTGATACAAGTGATCG CTTTTCCAATTTTTACTGAAAACATTTTTTGAGTGTAATTAGTTGTACAG CTGATTTTTTCGATGATGTTTTACTATTCGATAGGCTCCCTTATACGTTA AAGCTCCCTTATTCGACGAAAGTCCAATTCCCCTTGAAGATCGAATTAGA GAGCGTCAACTGTATCTTCTTATGTTATTTTCTTATCATTTGGTTAACTT CGAAACAAACTACTTTATTACATGAATAACTATAGAAGTATAACGGCCTT GAAATTAACACACATCAAGTTACTTAACTCGAATGAGCAGATGTAAACTT TAGAGTGAGCCTTCTTCGGTGTTTTTATTAACACGAAAATTTTCAATTCG TGTTAATTTCACGTCTCCTAATATTCATGTAATAAGGTAGATTTGCTGCT AGATTTTGATACATATGTAAGATACAATGCACTCTCGCT

Coding sequence (CDS) from alignment at scaffold_116:853512..861300-

>TCONS_00046721 ID=TCONS_00046721|Name=TCONS_00046721|organism=Clytia hemisphaerica|type=CDS|length=3582bp|location=Sequence derived from alignment at scaffold_116:853512..861300- (Clytia hemisphaerica)
AAAATATTGTGCGAATCGTACAAATATTTTAACGAACTGATCGAAGAATA
TTGTCAACAAAATAACATCGATATGAACCAAATGATTTCAAATCGTGAGA
AATCGTGGGCTGAAAAAAGGAAACATGTTTTCGATAAAAAACAACAAAAA
AGAAAGGGGAAGAAACAACCAGTTGCCAATGAAAGTTTAGCAGGATATGA
TGGTTTTCACGGATATAACGAAGCAAATGAAGATTTTGGAGAGAACGAAA
GATTTGATGAAGATGATTCGTTTGCTTTTGAAGACGAGGCTGATACAAGT
GATCGCTTTTCCAATTTTTACTGAATGGTTGAAATAGCCAACAGACTCTT
CAACGAATTAGTTGAACAATATTGTGTTGAAAACAACATCGACCCAATGA
AACTTCTCGAAAACGAAAGCGAAATCGATCCGAAGAAGCATCCCAATGGA
TGTATGCAACTGGCCAAAAATGTTCATGTGGGGTCTGGGATTGATTGGAA
TAGACTGCCGAGAAGTAAAGAACCACTTCATTTTATGCAATTGTACAGAG
ATTTAGAAATGAAAGATACTATACCGATCGATGTGTTCAAAGATTGTCAA
AGGAAACGCGAAAAATTTAAACAAGATCAAAAGAAAGCAGTTCAGAAGCA
CAACCCTATAACTACACATATGATTGAGACTTATTGCACCCAACATGACA
TTGATTTGAAATCGTTCATCGAAGATAAAAAGAACAGAAAGGATAATAAG
ACAATGAGAAGCCACCAAAATAATGATAAATATTCAAGCTCCTCTGCTTC
TGCAGTTACTGGAAATTTTAGGCACGATTTTACATCGGATTCTCAAACAG
AAGGTTTCATGAGTTTTGAGGGAAGCTCCGGTCAGACATCAAAGAACCTT
GATATGCCTTTCACCTCGAATGCTAATTGCCACGAACTCGACACAAAACC
TTTAATTAGCCAACAGACCATGAATCAGGCTATAAATATAAATCTTAATT
CAGATAAAGTTTTACGAAGCCAAAGACCTCTTGAAATAATGACATTTTAT
CAGCTTGAAGAATTATCTGGTATTGTGCCTGAAAGTGTTATTGTCGCTTT
TCAATACGAGCAACGAAAGTTTTTAGAGAAGAACTTGAGGAAAGAATTGA
AGAAAGCCTCGAAGGGAGCCGAGAAAAAGATTGCAAGACGAAAGAAAATA
TTGTGCGAATCGTACAAATATTTTAACGAACTGATCGAAGAATATTGTCA
ACAAAATAACATCGATATGAACCAAATGATTTCAAATCGTGAGAAATCGT
GGGCTGAAAAAAGGAAACATGTTTTCGATAAAAAACAACAAAAAAGAAAG
GGGAAGAAACAACCAGTTGCCAATGAAAGTTTAGCAGGATATGATGGTTT
TCACGGATATAACGAAGCAAATGAAGATTTTGGAGAGAACGAAAGATTTG
ATGAAGATGATTCGTTTGCTTTTGAAGACGAGGCTGATACAAGTGATCGC
TTTTCCAATTTTTACTGAATGGTTGAAATAGCCAACAGACTCTTCAACGA
ATTAGTTGAACAATATTGTGTTGAAAACAACATCGACCCAATGAAACTTC
TCGAAAACGAAAGCGAAATCGATCCGAAGAAGCATCCCAATGGATGTATG
CAACTGGCCAAAAATGTTCATGTGGGGTCTGGGATTGATTGGAATAGACT
GCCGAGAAGTAAAGAACCACTTCATTTTATGCAATTGTACAGAGATTTAG
AAATGAAAGATACTATACCGATCGATGTGTTCAAAGATTGTCAAAGGAAA
CGCGAAAAATTTAAACAAGATCAAAAGAAAGCAGTTCAGAAGCACAACCC
TATAACTACACATATGATTGAGACTTATTGCACCCAACATGACATTGATT
TGAAATCGTTCATCGAAGATAAAAAGAACAGAAAGGATAATAAGACAATG
AGAAGCCACCAAAATAATGATAAATATTCAAGCTCCTCTGCTTCTGCAGT
TACTGGAAATTTTAGGCACGATTTTACATCGGATTCTCAAACAGAAGGTT
TCATGAGTTTTGAGGGAAGCTCCGGTCAGACATCAAAGAACCTTGATATG
CCTTTCACCTCGAATGCTAATTGCCACGAACTCGACACAAAACCTTTAAT
TAGCCAACAGACCATGAATCAGGCTATAAATATAAATCTTAATTCAGATA
AAGTTTTACGAAGCCAAAGACCTCTTGAAATAATGACATTTTATCAGCTT
GAAGAATTATCTGGTATTGTGCCTGAAAGTGTTATTGTCGCTTTTCAATA
CGAGCAACGAAAGTTTTTAGAGAAGAACTTGAGGAAAGAATTGAAGAAAG
CCTCGAAGGGAGCCGAGAAAAAGATTGCAAGACGAAAGAAAATATTGTGC
GAATCGTACAAATATTTTAACGAACTGATCGAAGAATATTGTCAACAAAA
TAACATCGATATGAACCAAATGATTTCAAATCGTGAGAAATCGTGGGCTG
AAAAAAGGAAACATGTTTTCGATAAAAAACAACAAAAAAGAAAGGGGAAG
AAACAACCAGTTGCCAATGAAAGTTTAGCAGGATATGATGGTTTTCACGG
ATATAACGAAGCAAATGAAGATTTTGGAGAGAACGAAAGATTTGATGAAG
ATGATTCGTTTGCTTTTGAAGACGAGGCTGATACAAGTGATCGCTTTTCC
AATTTTTACTGAATGGTTGAAATAGCCAACAGACTCTTCAACGAATTAGT
TGAACAATATTGTGTTGAAAACAACATCGACCCAATGAAACTTCTCGAAA
ACGAAAGCGAAATCGATCCGAAGAAGCATCCCAATGGATGTATGCAACTG
GCCAAAAATGTTCATGTGGGGTCTGGGATTGATTGGAATAGACTGCCGAG
AAGTAAAGAACCACTTCATTTTATGCAATTGTACAGAGATTTAGAAATGA
AAGATACTATACCGATCGATGTGTTCAAAGATTGTCAAAGGAAACGCGAA
AAATTTAAACAAGATCAAAAGAAAGCAGTTCAGAAGCACAACCCTATAAC
TACACATATGATTGAGACTTATTGCACCCAACATGACATTGATTTGAAAT
CGTTCATCGAAGATAAAAAGAACAGAAAGGATAATAAGACAATGAGAAGC
CACCAAAATAATGATAAATATTCAAGCTCCTCTGCTTCTGCAGTTACTGG
AAATTTTAGGCACGATTTTACATCGGATTCTCAAACAGAAGGTTTCATGA
GTTTTGAGGGAAGCTCCGGTCAGACATCAAAGAACCTTGATATGCCTTTC
ACCTCGAATGCTAATTGCCACGAACTCGACACAAAACCTTTAATTAGCCA
ACAGACCATGAATCAGGCTATAAATATAAATCTTAATTCAGATAAAGTTT
TACGAAGCCAAAGACCTCTTGAAATAATGACATTTTATCAGCTTGAAGAA
TTATCTGGTATTGTGCCTGAAAGTGTTATTGTCGCTTTTCAATACGAGCA
ACGAAAGTTTTTAGAGAAGAACTTGAGGAAAGAATTGAAGAAAGCCTCGA
AGGGAGCCGAGAAAAAGATTGCAAGACGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029807XLOC_029807Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046721-proteinTCONS_00046721-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046721-exon-scaffold_116-1575043694:860559..861300TCONS_00046721-exon-scaffold_116-1575043694:860559..861300Clytia hemisphaericaexon
TCONS_00046721-exon-scaffold_116-1575043694:857193..857537TCONS_00046721-exon-scaffold_116-1575043694:857193..857537Clytia hemisphaericaexon
TCONS_00046721-exon-scaffold_116-1575043694:853512..854255TCONS_00046721-exon-scaffold_116-1575043694:853512..854255Clytia hemisphaericaexon
TCONS_00046721-exon-scaffold_116-1510915933:860559..861300TCONS_00046721-exon-scaffold_116-1510915933:860559..861300Clytia hemisphaericaexon
TCONS_00046721-exon-scaffold_116-1510915933:857193..857537TCONS_00046721-exon-scaffold_116-1510915933:857193..857537Clytia hemisphaericaexon
TCONS_00046721-exon-scaffold_116-1510915933:853512..854255TCONS_00046721-exon-scaffold_116-1510915933:853512..854255Clytia hemisphaericaexon
TCONS_00046721-exon-scaffold_116-1491911889:860559..861300TCONS_00046721-exon-scaffold_116-1491911889:860559..861300Clytia hemisphaericaexon
TCONS_00046721-exon-scaffold_116-1491911889:857193..857537TCONS_00046721-exon-scaffold_116-1491911889:857193..857537Clytia hemisphaericaexon
TCONS_00046721-exon-scaffold_116-1491911889:853512..854255TCONS_00046721-exon-scaffold_116-1491911889:853512..854255Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_116supercontigscaffold_116:853512..861300 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.9611 16.0987 8.01378 6.75826 15.4266 12.723 13.8079 13.7651 8.64024 8.04702 7.16129 6.64854 6.25668 7.13778 7.10831 7.19258 5.75083 8.14699 1.78622 2.20194 6.83044 7.78449 21.9004 18.2876 11.1481 14.5206 3.60373 2.54894 12.9076 14.5927
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046721 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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