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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046638 ID=TCONS_00046638|Name=TCONS_00046638|organism=Clytia hemisphaerica|type=transcript|length=968bp
TTTTAACACGGTTATCTCAGAAGGAGTAATACTGAACGTTTTCAAGACAT
GTTGTCCAGAGGAAAACGAATGTGTCAGAAAAAATGACTTCCTGATATGA
AGAATACTTGAGACATCATCACAATCTAAAGTTTCATTTATTAGATAATT
TCCAGAGAAACCAATCGCTTTTAAATGTAGCATATTAGTTCCATATCTAT
GACCTGACGGTAGTCTTTTTCTGTATGTCCTCTTCTGGAACACATAAACA
ATGGAAGCATCGATATCGAGAAAAAGGGAGGTGCACTCAAAATAATGGTT
TATAGAAATCCGTTTTAAATGAAATATTTCGTTTTCATTGAAACATACAA
GATCTAAGATTGAGTTGGAGGTGTTCTCAATGTTACTCGAAGGTGATATA
ATGACCAACGTCTTTGCCACCAACCTACAAGTGCGGATAGGGCGCCAAGA
GTTATTAACTATAGGTGGCAACATAAGTCTGAGCTTTACAAATGATTCTT
GATCGCAGTGAATAATTGTCCCAACAGGTTCCGTTCCGTCTACAAATCCA
GAGTAAATAACAATTTCACCAATTCGATTTGTCTGGTCCACCACGAATCC
GATGATAAACCATCGCCCTGATGAATTGTCGTAAAAGACGCCATAATCAG
CGTTGGTACTACTCTTTAGAACAAGCTTGATGTAATTTCGATTGAGAGTC
TTGCAATCTTCACCGACTGAGCAGACCAATATGATAGCAACAATTTTGTG
TTGTGGCAAGTTATGACGATCTACACTGCACCTATCCAGAGACTCTCGTA
TACTATAAAGTCTCTTTCGTGACGAAAATCCACCATCAAAGCGAAAAGAG
CGATCAATATTTTTCTGATCGTCCTCCCAAGAACTTTCAACTGACGTTGT
CGAACTTGGTAGAAAGTTCACTCGGTAGCGATTTTTTTCTAATCCACCCT
GCATATTCACTAATAAAC Run BLAST on NCBI transcript from alignment at scaffold_116:251230..252343+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046638 ID=TCONS_00046638|Name=TCONS_00046638|organism=Clytia hemisphaerica|type=transcript|length=1114bp|location=Sequence derived from alignment at scaffold_116:251230..252343+ (Clytia hemisphaerica)
TTTTAACACGGTTATCTCAGAAGGAGTAATACTGAACGTTTTCAAGACAT
GTTGTCCAGAGGAAAACGAATGTGTCAGAAAAAATGACTTCCTGATATGA
AGAATACTTGAGACATCATCACAATCTAAAGTTTCATTTATTAGATAATT
TCCAGAGAAACCAATCGCTTTTAAATGTAGCATATTAGTTCCATATCTAT
GACCTGACGGTAGTCTTTTTCTGTATGTCCTCTTCTGGAACACATAAACA
ATGGAAGCATCGATATCGAGAAAAAGGGAGGTGCACTCAAAATAATGGTT
TATAGAAATCCGTTTTAAATGAAATATTTCGTTTTCATTGAAACATACAA
GATCTAAGATTGAGTTGGAGGTGTTCTCAATGTTACTCGAAGGTGATATA
ATGACCAACGTCTTTGCCACCAACCTACAAGTGCGGATAGGGCGCCAAGA
GTTATTAACTATAGGTGACAACATAAGTCTGAGTTTTACAAATGATTCTT
GATCGCAGTGAATAATTGTCCCAACAGGTTCCGTTCCGTCTACAAATCCA
GAGTAAATAACAATTTCACCAATTCGNTGCGGATAGGGCGCCAAGAGTTA
TTAACTATAGGTGGCAACATAAGTCTGAGCTTTACAAATGATTCTTGATC
GCAGTGAATAATTGTCCCAACAGGTTCCGTTCCGTCTACAAATCCAGAGT
AAATAACAATTTCACCAATTCGATTTGTCTGGTCCACCACGAATCCGATG
ATAAACCATCGCCCTGATGAATTGTCGTAAAAGACGCCATAATCAGCGTT
GGTACTACTCTTTAGAACAAGCTTGATGTAATTTCGATTGAGAGTCTTGC
AATCTTCACCGACTGAGCAGACCAATATGATAGCAACAATTTTGTGTTGT
GGCAAGTTATGACGATCTACACTGCACCTATCCAGAGACTCTCGTATACT
ATAAAGTCTCTTTCGTGACGAAAATCCACCATCAAAGCGAAAAGAGCGAT
CAATATTTTTCTGATCGTCCTCCCAAGAACTTTCAACTGACGTTGTCGAA
CTTGGTAGAAAGTTCACTCGGTAGCGATTTTTTTCTAATCCACCCTGCAT
ATTCACTAATAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046638-exon-scaffold_116-1491911889:251230..251693 | TCONS_00046638-exon-scaffold_116-1491911889:251230..251693 | Clytia hemisphaerica | exon |
| TCONS_00046638-exon-scaffold_116-1510915933:251230..251693 | TCONS_00046638-exon-scaffold_116-1510915933:251230..251693 | Clytia hemisphaerica | exon |
| TCONS_00046638-exon-scaffold_116-1575043694:251230..251693 | TCONS_00046638-exon-scaffold_116-1575043694:251230..251693 | Clytia hemisphaerica | exon |
| TCONS_00046638-exon-scaffold_116-1491911889:251840..252343 | TCONS_00046638-exon-scaffold_116-1491911889:251840..252343 | Clytia hemisphaerica | exon |
| TCONS_00046638-exon-scaffold_116-1510915933:251840..252343 | TCONS_00046638-exon-scaffold_116-1510915933:251840..252343 | Clytia hemisphaerica | exon |
| TCONS_00046638-exon-scaffold_116-1575043694:251840..252343 | TCONS_00046638-exon-scaffold_116-1575043694:251840..252343 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_116 | supercontig | scaffold_116:251230..252343 + |
Blast
The following BLAST results are available for this feature:
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