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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046600 ID=TCONS_00046600|Name=TCONS_00046600|organism=Clytia hemisphaerica|type=transcript|length=1273bp
ctctaaatgaagacattctattgcaaaataactctttttgcacaaatcga
atgttttttgtttacattttggatcTTTGAGTTCACGAACATGAGAGAGA
GGTTGTTTGATTGGCATCTtgtttttaaagtggttttaaTTTCAGTTCTT
TGCAAAAGAATATACTCAGAGTATCTCTGCATGTTTTTATGTTCGAATTC
AGTATTAATTTTACGGCATTCGATCTATGTAGAGTGGctatagtttgttt
tgttggcataacttttgtaattaaaatgtttgtatttttctttggcAAAC
TACATGGAAAAATGGGGtgattggaaaataattttttgttagaCAAGTTT
GAATATGTCTTCGTTACTTTTCAGTTTTTAGTTTggctcaaaaacattaa
aaaagcagccaaaACATGCTGAGAAAGTGACCCTCAATGGACCTCAtccc
tttgtttacaattgtcGTACTTTGGCGGccgttttatttcaaaattatac
tTCATCACAGAGGTCTCCGTAgggaaaaacttttatcaaacagacaatgc
gcgagtgaactacgctacgataatcgtgagatacactctggtacagagta
actcctcgcttgagaaaatgattgacagattaatgTTTTTCACCCACGCG
GGGGCTCCTGGGCATTCTACAAGCGTTCTTgtctcaatcctcggaccgca
cTAAAATGGCAGATTTAGCTGTGACAGATTATTTTGATGGAaattgttgg
aatgtttacaaggctcttgacagaaaatcctttattttattgtccttggt
tgctgcacagacGACtgcaggcgactgaggttcgattcgcACTCGCAGTG
gatcacttggcaagtgaatatgAACCTTCACACATCAGGTCAACCCATGT
CATGCCATGCGAAGAGAATTGGGTACTAGTCatttcaaggtgctgacggg
gcgcaNCCATGCGAAGAGAATTGGGTactagtcagttcaaggtgctgacg
gggcgctatcgtcaactgctctaacatGGGACAGccattcggccaccatt
tcacgaaacctccaaagtcattaatTAACATAACCACGAATCATAGATAG
CAAACAATGTAAATACGCTACCCTCACCAGGTCAAAAGGAACAAATCTTT
GCAACAGGAAACGCGTAAATGAGATGGCGCGCATTCGCACAAGCGTCAAA
ACGCAGATATAAAAAAGTCTGTTCTTCCGTGGAAAATTGCGAGGTCTGTT
ATCGACACTCTGTAACTTAAACA Run BLAST on NCBI transcript from alignment at scaffold_114:97176..98448 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046600 ID=TCONS_00046600|Name=TCONS_00046600|organism=Clytia hemisphaerica|type=transcript|length=1273bp|location=Sequence derived from alignment at scaffold_114:97176..98448 (Clytia hemisphaerica)
TGTTTAAGTTACAGAGTGTCGATAACAGACCTCGCAATTTTCCACGGAAG
AACAGACTTTTTTATATCTGCGTTTTGACGCTTGTGCGAATGCGCGCCAT
CTCATTTACGCGTTTCCTGTTGCAAAGATTTGTTCCTTTTGACCTGGTGA
GGGTAGCGTATTTACATTGTTTGCTATCTATGATTCGTGGTTATGTTAat
taatgactttggaggtttcgtgaaatggtggccgaatggCTGTCCCatgt
tagagcagttgacgatagcgccccgtcagcaccttgaactgactagtACC
CAATTCTCTTCGCATGGNtgcgccccgtcagcaccttgaaatGACTAGTA
CCCAATTCTCTTCGCATGGCATGACATGGGTTGACCTGATGTGTGAAGGT
TcatattcacttgccaagtgatcCACTGCGAGTgcgaatcgaacctcagt
cgcctgcaGTCgtctgtgcagcaaccaaggacaataaaataaaggatttt
ctgtcaagagccttgtaaacattccaacaattTCCATCAAAATAATCTGT
CACAGCTAAATCTGCCATTTTAgtgcggtccgaggattgagacAAGAACG
CTTGTAGAATGCCCAGGAGCCCCCGCGTGGGTGAAAAAcattaatctgtc
aatcattttctcaagcgaggagttactctgtaccagagtgtatctcacga
ttatcgtagcgtagttcactcgcgcattgtctgtttgataaaagtttttc
ccTACGGAGACCTCTGTGATGAagtataattttgaaataaaacggCCGCC
AAAGTACgacaattgtaaacaaagggaTGAGGTCCATTGAGGGTCACTTT
CTCAGCATGTtttggctgcttttttaatgtttttgagccAAACTAAAAAC
TGAAAAGTAACGAAGACATATTCAAACTTGtctaacaaaaaattattttc
caatcaCCCCATTTTTCCATGTAGTTTgccaaagaaaaatacaaacattt
taattacaaaagttatgccaacaaaacaaactatagCCACTCTACATAGA
TCGAATGCCGTAAAATTAATACTGAATTCGAACATAAAAACATGCAGAGA
TACTCTGAGTATATTCTTTTGCAAAGAACTGAAAttaaaaccactttaaa
aacaAGATGCCAATCAAACAACCTCTCTCTCATGTTCGTGAACTCAAAga
tccaaaatgtaaacaaaaaacattcgatttgtgcaaaaagagttattttg
caatagaatgtcttcatttagag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046600-exon-scaffold_114-1491911889:97176..98448 | TCONS_00046600-exon-scaffold_114-1491911889:97176..98448 | Clytia hemisphaerica | exon |
| TCONS_00046600-exon-scaffold_114-1510915933:97176..98448 | TCONS_00046600-exon-scaffold_114-1510915933:97176..98448 | Clytia hemisphaerica | exon |
| TCONS_00046600-exon-scaffold_114-1575043694:97176..98448 | TCONS_00046600-exon-scaffold_114-1575043694:97176..98448 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_114 | supercontig | scaffold_114:97176..98448 . |
Blast
The following BLAST results are available for this feature:
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