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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046559 ID=TCONS_00046559|Name=TCONS_00046559|organism=Clytia hemisphaerica|type=transcript|length=1373bp
ATCCCGCATAATATCAATGTCACGATGTTAATAATGAACTAATCATTGAA
AACAATCTTTAGAATATTACATTATCCTGTCACCAATGGCTTATAAACAT
tgatatgaaaatgaaagtgactgaTATCTACAGTCTTTTCAGAACATTTT
TTGTATGATATATACATACCACACGATGACAAAACGAATTTCGATATATT
ATTCACTCGTACATATATTGTAGAATTCTATTACTAATACCATATATTTT
GTTTATAGTTGTATTATAGCTCTCGGTATTACCAATACttaattttttag
atatttgcGAATATGACTTGCAATTCAagaaagtgctctataccatcGGT
AGAGCGATATATCAGTCAAGAATCTGAGTGAAGACTGCCTTAAACggcac
gaaactccgagtatcggaaaataaatttgtctctattcttgactgataat
tttcgagacatgaaaaatgactatattgtaatctgttttcaatgaatact
ctaaaatgtactggagatgacatgtaggcgttaataatgtgcgcgcgctc
tttcgcgagcgcgatgcgtgatggaaggcggtcgtttcagtNTAGCCAAA
AATATTAAAGCATATGGCGGCAACATGATAGGGGTTAGAAGTAAATAAAA
CTTCCCTCttattacactcttttttttataagaaccagtaaatttttgct
gaggctcggctgttcttaattNTGATGCGtggatgcgtgatggaaggcgg
tcgtttcagtgtggtttagatccacactgtgacctagtttagATATATGA
TTATCGCTGAAACTTTTACAGAACTAGCactttgaataaaagaaaactat
ttagaaaatttcataGGTTTCGACCAAATTGGAGTAAGAAATGGCTTCTC
GGAATTTATTGttttcagttatattacataATAGGTTAGGTTTATTGTAT
TATAGTGTACATTATCAACGTAACATAGTAACTAGTATTATAGTCCTGAA
GATTATCAGGGTTATTTCAGCTCGAAATGCTGATACATAAATATGATTAT
GTATATTTTGAATATActaatttttaaaactaaatatttttttacatacA
CATTTTTTGAGAACGGACAAATTATctactttatatttttgtacTGATAT
TTTTGTATGAACCTATTTTTGtgtacaatttttttgtttttgttttgttt
tgatcgttaatgattatttttgatacAAAGATATATATCTAGATACAAAA
Tctcttttttgtgttttaacgacctgtatggtggcccatgagggccaagt
taaattgttttgacatttctataaaaaaattcaaaacaatttacttttca
cattcatttttgCAATAGCTTTT Run BLAST on NCBI transcript from alignment at scaffold_113:36960..38332 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046559 ID=TCONS_00046559|Name=TCONS_00046559|organism=Clytia hemisphaerica|type=transcript|length=1373bp|location=Sequence derived from alignment at scaffold_113:36960..38332 (Clytia hemisphaerica)
AAAAGCTATTGcaaaaatgaatgtgaaaagtaaattgttttgaatttttt
tatagaaatgtcaaaacaatttaacttggccctcatgggccaccatacag
gtcgttaaaacacaaaaaagagATTTTGTATCTAGATATATATCTTTgta
tcaaaaataatcattaacgatcaaaacaaaacaaaaacaaaaaaattgta
caCAAAAATAGGTTCATACAAAAATATCAgtacaaaaatataaagtagAT
AATTTGTCCGTTCTCAAAAAATGTgtatgtaaaaaaatatttagttttaa
aaattagTATATTCAAAATATACATAATCATATTTATGTATCAGCATTTC
GAGCTGAAATAACCCTGATAATCTTCAGGACTATAATACTAGTTACTATG
TTACGTTGATAATGTACACTATAATACAATAAACCTAACCTATtatgtaa
tataactgaaaaCAATAAATTCCGAGAAGCCATTTCTTACTCCAATTTGG
TCGAAACCtatgaaattttctaaatagttttcttttattcaaagtGCTAG
TTCTGTAAAAGTTTCAGCGATAATCATATATctaaactaggtcacagtgt
ggatctaaaccacactgaaacgaccgccttccatcacgcatccaCGCATC
ANaattaagaacagccgagcctcagcaaaaatttactggttcttataaaa
aaaagagtgtaataaGAGGGAAGTTTTATTTACTTCTAACCCCTATCATG
TTGCCGCCATATGCTTTAATATTTTTGGCTANactgaaacgaccgccttc
catcacgcatcgcgctcgcgaaagagcgcgcgcacattattaacgcctac
atgtcatctccagtacattttagagtattcattgaaaacagattacaata
tagtcatttttcatgtctcgaaaattatcagtcaagaatagagacaaatt
tattttccgatactcggagtttcgtgccGTTTAAGGCAGTCTTCACTCAG
ATTCTTGACTGATATATCGCTCTACCgatggtatagagcactttctTGAA
TTGCAAGTCATATTCgcaaatatctaaaaaattaaGTATTGGTAATACCG
AGAGCTATAATACAACTATAAACAAAATATATGGTATTAGTAATAGAATT
CTACAATATATGTACGAGTGAATAATATATCGAAATTCGTTTTGTCATCG
TGTGGTATGTATATATCATACAAAAAATGTTCTGAAAAGACTGTAGATAt
cagtcactttcattttcatatcaATGTTTATAAGCCATTGGTGACAGGAT
AATGTAATATTCTAAAGATTGTTTTCAATGATTAGTTCATTATTAACATC
GTGACATTGATATTATGCGGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046559-exon-scaffold_113-1491911889:36960..38332 | TCONS_00046559-exon-scaffold_113-1491911889:36960..38332 | Clytia hemisphaerica | exon |
| TCONS_00046559-exon-scaffold_113-1510915933:36960..38332 | TCONS_00046559-exon-scaffold_113-1510915933:36960..38332 | Clytia hemisphaerica | exon |
| TCONS_00046559-exon-scaffold_113-1575043694:36960..38332 | TCONS_00046559-exon-scaffold_113-1575043694:36960..38332 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_113 | supercontig | scaffold_113:36960..38332 . |
Blast
The following BLAST results are available for this feature:
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