TCONS_00046485 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046485
Unique NameTCONS_00046485
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length159

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046485 ID=TCONS_00046485|Name=TCONS_00046485|organism=Clytia hemisphaerica|type=transcript|length=159bp
GAACAAGTGAAGTGTACAAGATCTATacctttttctaaaattttgcatTA
ATATTGTTGCATTACTGACTCTTCTTCTATCaatcctttttcaatttttt
attggtGAGTATTTTGTGTGTATTGACCATTTATTTATCTGACTATTTAA
GATTTTGGC
Run BLAST on NCBI

transcript from alignment at scaffold_111:35209..35367

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046485 ID=TCONS_00046485|Name=TCONS_00046485|organism=Clytia hemisphaerica|type=transcript|length=159bp|location=Sequence derived from alignment at scaffold_111:35209..35367 (Clytia hemisphaerica)
GCCAAAATCTTAAATAGTCAGATAAATAAATGGTCAATACACACAAAATA
CTCaccaataaaaaattgaaaaaggattGATAGAAGAAGAGTCAGTAATG
CAACAATATTAatgcaaaattttagaaaaaggtATAGATCTTGTACACTT
CACTTGTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029670XLOC_029670Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046485-exon-scaffold_111-1491911889:35209..35367TCONS_00046485-exon-scaffold_111-1491911889:35209..35367Clytia hemisphaericaexon
TCONS_00046485-exon-scaffold_111-1510915933:35209..35367TCONS_00046485-exon-scaffold_111-1510915933:35209..35367Clytia hemisphaericaexon
TCONS_00046485-exon-scaffold_111-1575043694:35209..35367TCONS_00046485-exon-scaffold_111-1575043694:35209..35367Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_111supercontigscaffold_111:35209..35367 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046485 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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