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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046478 ID=TCONS_00046478|Name=TCONS_00046478|organism=Clytia hemisphaerica|type=transcript|length=891bp TTTTAATTGAAGATCTTGGGATGTATACATTtaatatattgaattttttc tgttttaggtGTCAttgcatcatcatcatcatcatcaggtGGAGTGTAAC AATAGTATAAATCAGCGAACTTGCATCTATTCAGCTTTCACGGATTTACT TTGAAAACTCAGCTAAACTTGAATCTATTCAGTTTATACGGATTAACTCG ACAAACTCGTTTAATTGTTACACTGATTTATTCGGAAAACGCGGCTAAAC TTGAATTTACTCGGCTGACATTGATATACTCGGCTGACATTGATATACTC GGCATCTACTCGGTTTACTCGGCTCAGATTTAAATAGCGAATTCAACCCA TCTTNATCTACTCGGTTTACTCGGCTCAGATTTAAATAGCGAATTCAACC CATCTTGCAGCTTTCTCAGCCAATCCGAATTCCTTGAGTTTGCTAggttt aaaagaaataaatacattGATATTGTTATTTAACTCTCATTTCTTGTACC TTGTACCCTTCTAAATTTTCCAAAGCATGATTTTTGCGATCCCACTGTGC GAGTAAGGATTGAAACTCGGCCTTCAAGGAAGCAAAAACAAACTAGATAT GACAAAGCCCTGTTTATTGGTTTTTAGActctgggccttcatgcccttgg gcctcttgttcttttttatttgagCTTGCCTGTAAGAATATTCCATTGCC GCGCGAACTGCACGCAATCAAAATGTTCCAAATAATGGCCGCCATAAACT CTAAGTATCGAGGGCGGTTAAACTTAGGTAAATACACGCAAGATGGTAGC TTAGTTACatagtttgtttacaattttttcaaactggATGGAACACAGTA AGTTTTTAGCTCAAGTTTTACTTTTCTATTTCatacatttt Run BLAST on NCBI transcript from alignment at scaffold_110:315808..316698 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046478 ID=TCONS_00046478|Name=TCONS_00046478|organism=Clytia hemisphaerica|type=transcript|length=891bp|location=Sequence derived from alignment at scaffold_110:315808..316698 (Clytia hemisphaerica) aaaatgtatGAAATAGAAAAGTAAAACTTGAGCTAAAAACTTACTGTGTT
CCATccagtttgaaaaaattgtaaacaaactatGTAACTAAGCTACCATC
TTGCGTGTATTTACCTAAGTTTAACCGCCCTCGATACTTAGAGTTTATGG
CGGCCATTATTTGGAACATTTTGATTGCGTGCAGTTCGCGCGGCAATGGA
ATATTCTTACAGGCAAGctcaaataaaaaagaacaagaggcccaagggca
tgaaggcccagagTCTAAAAACCAATAAACAGGGCTTTGTCATATCTAGT
TTGTTTTTGCTTCCTTGAAGGCCGAGTTTCAATCCTTACTCGCACAGTGG
GATCGCAAAAATCATGCTTTGGAAAATTTAGAAGGGTACAAGGTACAAGA
AATGAGAGTTAAATAACAATATCaatgtatttatttcttttaaaccTAGC
AAACTCAAGGAATTCGGATTGGCTGAGAAAGCTGCAAGATGGGTTGAATT
CGCTATTTAAATCTGAGCCGAGTAAACCGAGTAGATNAAGATGGGTTGAA
TTCGCTATTTAAATCTGAGCCGAGTAAACCGAGTAGATGCCGAGTATATC
AATGTCAGCCGAGTATATCAATGTCAGCCGAGTAAATTCAAGTTTAGCCG
CGTTTTCCGAATAAATCAGTGTAACAATTAAACGAGTTTGTCGAGTTAAT
CCGTATAAACTGAATAGATTCAAGTTTAGCTGAGTTTTCAAAGTAAATCC
GTGAAAGCTGAATAGATGCAAGTTCGCTGATTTATACTATTGTTACACTC
CacctgatgatgatgatgatgatgcaaTGACacctaaaacagaaaaaatt
caatatattaAATGTATACATCCCAAGATCTTCAATTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00046478-exon-scaffold_110-1491911889:315808..316698 | TCONS_00046478-exon-scaffold_110-1491911889:315808..316698 | Clytia hemisphaerica | exon |
TCONS_00046478-exon-scaffold_110-1510915933:315808..316698 | TCONS_00046478-exon-scaffold_110-1510915933:315808..316698 | Clytia hemisphaerica | exon |
TCONS_00046478-exon-scaffold_110-1575043694:315808..316698 | TCONS_00046478-exon-scaffold_110-1575043694:315808..316698 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_110 | supercontig | scaffold_110:315808..316698 . |
Blast
The following BLAST results are available for this feature:
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