TCONS_00046452 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046452
Unique NameTCONS_00046452
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1929

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046452 ID=TCONS_00046452|Name=TCONS_00046452|organism=Clytia hemisphaerica|type=transcript|length=1929bp
GAAAGACGAAGACAAAGTAAAATTTGGAATTTATGTTGACGtatgcaaaa
aaaacaacgatttTACTGGCAAAAACATTTTATCGATCGCTAttatataa
tttcaaattttaaaccatAAAAGTTGATTTGCAATTTCTCGAACTGAGAT
AAAAACATTACGTGTTACTATAATATCTTACCTTAAAATGGATGCACTGG
CcttaataattttccttttattgGGTGTGGTTAACCTATCTCATGAAATA
CCATGGTATTTATCGTCTTGTACCGTTCGATATGACACAATAAAGTATTA
TAATTATACGTGCGAAGAAGTATACTTATGGCAGCCATTTTGTAAGAAGA
AATTGACGGTTGCATATTCTGATTTCAAACCATATgtttatcaaaatgaa
aatggaaCAGTAGATGGAGTTATACCAATATTCTTTAGAAAGGTGTTGAA
GGAGACATGCTGTCTTGGATGTGGTATGGAGCTCAAATACCTGCCAGAGA
AAGGGCATGATGAGAAAATATATGATCAGATGAATTATAACAAAGCTGCA
GATATCGTCATGCCAGCTCAAAATACGGCTCGGGGTTGGCTATTTCTCTT
CATGAATTATACTAATATTGCAGACATCGAACAGGTCAAGTGGATCGGCG
TTTTGGAGCCGCAAGAACCATCTGATAAAATGACATCATTGTTCAGAAGT
TTGATGCAAACATGGCCGTTGTTAGTGATGACTCTTTTTATGGCGGTTGC
AGCTGGATCCTTTGTTTGGCTGTTGGATTCAAGAAGCAACGATGAGCAAT
TTCCCGAACACTTTCCAACTGGCATGTTTGAAGGAATTTGGTGGGCTTTT
GTTAGTATGACTACTGTTGGatATGGTGATCGAACGCCTTCATTTTGGGC
CGCTAGACTTTTTGCAGTAGTCTGGATTTTCTTTGGTGTCACCTTCTTTG
GAATGTATTTGGGCACAATCACATCTGTTATGACCACAAATATGCAGGCC
AAAATCGAATTTACCATTGAAAACCATAAGattggCGTGCTTTCTTGGGC
GAACGCTGCTCGGCAAGCAACGATCTCGGAAAAAGGAATACCTCAAAAAT
ACGAAACGGTGGAAGAGTTGATTTCGGCTTTAAAGAGTAGAGATATACAC
GCAATCGCATTGGACGAATACATGACAGGTTACTATATCTCAGATATCCA
AGAAGTTATTCCCAAAGCTGCTATCCAAATGGCGAAAAAACCACTACAGG
CAGGGATAGGAGTGGGCACGTATGATAGTCCTATTCGAACTTTGGTCAAT
AGCTTTTATGGCGCAAACCACGATAATATATATGATCTGTGGTTTTCCAT
TGTTGACGAATTAATGaaaaacgtgtAGATGAAAAGGACAAGGAGTACGT
TTATANCTGTCATCAAAGTCGCTAGACAAAGTAAAAGAAGAACaacatga
aaaaataatgtAGACAGCATTAAACTTTAATGTACTgcatgccaaagctg
aagactCCATAGGAGGCAATAGGAGGGGAGCCATTTGGAATGAAAGAGAA
ACAAATGGTATACCATTTTGACATTGCTAATTCATATCATTTACATTGAT
GTCTTATNACACAAGACTGTGGCTGATATCAACAAAAAAGACGATCCGGT
GGAACCACTGTTTACGTACAAACACCAGTCGTTCACCATTTGTATTGGTT
CAGCATTCGTGTTCTCTTGTCTTTGTGTTATTGTCAACCAAATCATTGTC
AACAAACGTAAAAACAAGAGAAATTTAACAACAAAATGAGATATGAAGCC
GTTATCAAACATGAAATTATTCTATACCAAACAACTTACAACttgacttt
gttttttttttttaacgaaAAGTACAAgactccaggtaagtgacctaccg
gacgtaCGGCcattaagggtaggtttttt
Run BLAST on NCBI

transcript from alignment at scaffold_110:166521..184842-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046452 ID=TCONS_00046452|Name=TCONS_00046452|organism=Clytia hemisphaerica|type=transcript|length=18322bp|location=Sequence derived from alignment at scaffold_110:166521..184842- (Clytia hemisphaerica)
GAAAGACGAAGACAAAGTAAAATTTGGAATTTATGTTGACGTATGCAAAA
AAAACAACGATTTTACTGGCAAAAACATTTTATCGATCGCTATTATATAA
TTTCAAATTTTAAACCATAAAAGTTGATTTGCAATTTCTCGAACTGAGAT
AAAAACATTACGTGTTACTATAATATCTTACCTTAAAATGGATGCACTGG
CCTTAATAATTTTCCTTTTATTGGGTGTGGTTAACCTATCTCATGAAATA
CCATGGTATTTATCGTCTTGTACCGTTCGATATGACACAATAAAGTATTA
TAATTATACGTGCGAAGAAGTATACTTATGGCAGCCATTTTGTAAGAAGA
AATTGACGGTTGCATATTCTGATTTCAAACCATATGTTTATCAAAATGAA
AATGGAACAGTAGATGGAGTTATACCAAGTAAGTTGTTTAATTCGGTTCT
AGGAAAATTGCCCCCATGACGATTGCCCCCCGAATAATTGCCCCCCGGAT
AATTGCCCCCGGGACAATTGCTCCCGGACAATTGCCCCCAGGACAATTGC
CCCCTGGACAATTGCCCCCCAGACAATTGCCCCCAGGANNNNNNNNNNNN
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NNNNNNNNNNNCTAAAATGGGCGTCAGTCAGGGCGTACGGAAGGCGTTTT
GACACTGAAAATTATTATGATGGAGAAAGCCCATTTTAACAAATATTTCC
CTTTTGGAAAATGGGAAATATTTAAAAATTCAATTCTTTATTTATCAAAA
ACAGGGAGTGGGTATATTATGCAGACTATTTTCTCTGTAATCCCCAAAAA
GTCTCTCTTGGAAAAATCATACAGCATAGCATTATTGAACTCAGTATTTT
ATGGTCGTCGAACAAGGCGCGCATCTCGGGCACTTTGGTCGCTGAACGCT
TTTCCTATTCCACTGATCCAAAATAGAGGGGAGATATACTGCACATTTTT
TCTTTGCTCTATAATTGTTGATATCTTTTTGCACACTGTACAAGAGAGTT
AAATGTCTCTTCTGATTGGCTATTTAAAAAAGAACAATAGGGAAGCCGCA
CAGTGTAGCGAAAAAAGTTGAAAAGTTTCANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGACGAGCTGGGAAGCAGA
ACAACTCAATGCAGCAGTTAAAGATGAGGAAATTGACGTCTTATTCACAA
CAGAACATATATCGTTCCCTTTATGTTTGATTTCTATGACAGTTCTTACT
TTGGTCTGCATTGGAATAAACATTTATGTTAATAGAGGGCTTGATGGATT
GTCAGCACCCTCTGCTGGTTTCGGAATGCAAGAGAGACCACATGTTCAAA
ACACTCCAAGATTAAGTAAATGGAATACAAAAGCAATCTATACGACTTCG
AGCGAATCTGGTCATGAACTACATGAATTATACGACATGGACGATATATA
GTGAATGCAAGCAAGCAACATTTGAAACGAAGAGTGAGTGATAGTGATGA
ATTTGATAAGTGCCATCGACATTGCTGGACAAATGTAATGGGTAGAAATG
GGTTTTAAAGCACTTATAACCCTAATGCCGAGAAAAATTGGTTTTGAGCT
TAAAGGCTATAATGGACATTCAATATTTGGACCTCCCGGTGGTGGCGATT
AATCAGTCATTTCAATCCTCTCTTAGGAGGCCCCCTCTCATGCTTCGGCT
GAAATTTATTTTGTGCAAATACTGAAAAANNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNGCCATCCTTTGTTTACTTTGTAAGGACTAATTA
CCGAAAGGCATATTGCCTTCAATCAAGAGATATTGATTTGATTCTTATAA
AGTATGCTATCTTTAGGCGCTAAAATGGGCGTCAGTCAGGGCGTACGGAA
GGCGTTTTGACACTGAAAATTATTATGATGGAGAAAGCCCATTTTAAAAA
ATATTTCCCTTTTGGAAAACGGGAAATATTTAAAAATTTAATTATTTATT
TATCAAAAACCGGGAGTGGGTATATTATGCAGACTATTTTATCTGTAATC
CCCAAAAAGTCTCTCTTGGAAAAATCATACAGCATAGCATTATTGAACTC
AGTATTTTATGGTCGTCGAACAAGGCGCGCATCTCGGGCGCTTTGGTCGC
TGAACGCTTTTCCTATTCCACTGATCCAAAATAGAGGGGAGATATACTGC
ACATTTTTTCTTTGTTCTATAATTGTTGATATCTTTTTGTACACTGCNTA
CTGCACATTTTTTCTTTGTTCTATAATTGTTGATATCTTTTTGTACACTG
CACAAGAGAGTTAAATGTCTCTTCTGATTGGCTATTTAAAAAAGAACAAT
AGGGAAGCCGCACAGTGTAGCGAAAAAAGTTGAAAAGTTTCAACTCTTGG
TGCGCTCAAGGCGACAGACAGCCTTTGAAGGCTTGATTTATGTAATTTAT
GCAATAATTAAGCCGCGCGCCTTGTTCGACGAACATAAAATGCTGAGTGG
GTAGCGACCTTAACAAGAAAAATAGTCAAAAAGACTAACGATCACGCGAC
CAAGAATTGTCTCAACGGTGATTGTCTGAATTTTTTTTTTATTTGGGAGC
GGGGGCAATTGTCCGGGGGTAATTGTCCTGGGGGCAATTGTCCCGGGGGC
AATTGTCTAGGGGGTAATTGTCCTGCGGGGGAATTGTCTGGGGGGCAATT
GTCCCGGGGACAATTGTCCGGGGGCAATTATCCGGGGCAATTGTCCCGGG
GGCAATTGTCTAGGGGGCAATTGTCCCGGGGACAATTGTCCGGGGGCAAT
TATCCGGGGCAATTGTCCCGGGGGCAATTGTCTAGGGGGTAATTGTCCCA
GGGGGGAATTGTCTGGGGGGCAATTGTCTAGGGGGCAATTGTCCCGGGGA
CAATTGTCCGGGGGCAATTATCCTGGGGCAATTGTCACGGGGGGGCATTT
GTCCTGTCACGTTTAATTCCATCGATGTGTGTAAAGTAATGCACTAGTAA
GAGAGTGGTCAGAAAGTATCTACTAGNGGCAAATGTCTTGGGGGCAAATG
TCTGGGGGGCAATTGTCCGGGAGGCAATTATCCGGGGGCAATTGTCACGG
GGGGCAATTGTCCTGTCACGTTTAATTCCATCGATGTGTGTAATGCGCTA
GTAAGAGAGTAGTCAGAAAGTATCTACTAGAGGGGTGGAGGATTTCAGGG
CGGGGGTTAGAATTTTTTTTTGAGGGTTTAGGTTTTCAATAGAAATAAGG
AGCGGGGTGTGAAATATTTTTGGGCAACTCAAGAGATATCTCAGGAGGTC
ACATTTGAAGATTTGAAATTTGAAATTTTTTTCATTATTCGTATTTCGTA
TTATTGTTAATTCTATTAATGATAGCCTCGCCATTTTGCTTCCTATAGGT
CTTAACATTGTGTAAAAATTGGTTCAGTGGACTAAGCTCTAGTTTAGACG
GCCCACTTTTCGCCCTGCCTATTCTAATAATTTCTCTATTATTTATATGA
TAATTTTATATCGCTATGATTTTTCATCTTAACTTAATAATAAAAACAAA
ATTTGTAGCTAGTGAATTGAACTGACTGCCTTTCTCTACCTGTAATTATT
CTATTGGAGTATTTAATCACGTCATCCAGTCTTCCAAAATATCTAAACTG
TTCTCCGAACCTCCAATAATTTATTAGGGAGTCGAGGAAGAATATCTCGT
GTGAAACGTCTTAAAAAAACCAATGGCTTAATATCAGCTAACTTAGAGCG
TATCATAACAGTGACAGCAATCAAATCTTGTCTTTTACTTTCTAGTATTC
TTTAGAAAGGTGTTGAAGGAGACATGCTGTCTTGGATGTGGTATGGAGCT
CAAATACCTGCCAGAGAAAGGGCATGATGAGAAAATATATGATCAGATGA
ATTATAACAAAGCTGCAGATATCGTCATGCCAGCTCAAAATACGGCTCGG
GGTTGGCTATTTCTCTTCATGAATTATACTAATATTGCAGACATCGAACA
GGTCAAGTGGATCGGCGTTTTGGAGCCGCAAGAACCATCTGATAAAATGA
CATCATTGTTCAGAAGTTTGATGCAAACATGGCCGTTGTTAGTGATGACT
CTTTTTATGGCGGTTGCAGCTGGATCCTTTGTTTGGCTGTTGGTGAGATC
AAAATGGGATGGGGGTTAATACACCTTTTCGACCGTAGCCGCCAATTGAG
GCACATGAATTTTTCTGTCTACCACCCTAAAACCGTCCCAGTCTTTTTTC
CGCACCTTATAGACAATAGAAAAAGGTGTAGAAAAAAGGATTGGATCGAG
TTTAGGGGGATATTAATAATGAAGTGTCAGGCGTCTGATTGCGTGACTAC
GGTCGAAAAGGTGTATTGTTGTTAGTATTTGCCAAGTTTGTTTAAAAAGA
GCTCAGATTTCTGAAGAGGAGCATAGAGTGGAAGATAGTGATAGTGAGAA
ATCTTCTTGACGTATTTTTTTACTCAGAAACCTTCGTTTAGTTTCCACCA
ATATAATGAGAAGGCACTTAGAGCCCAAATTCGCTGCTAGCAGGAGAAAT
GATCAGGGAAAAAGGAGTTTCAAGATTTTATTCCGATTTTCAATAGGATT
CAAGAAGCAACGATGAGCAATTTCCCGAACACTTTCCAACTGGCATGTTT
GAAGGAATTTGGTGGGCTTTTGTTAGTATGACTACTGTTGGGTGAGATCA
AGTTTGTTTTCGCTTTCATAATGGGGGAGTCATGGGGGAGTCATTGGCGT
AGATGCTAAAATTTGGACAAGAAGAGGCATTGTTTTCAAATTTTTCCAAA
CCGTCTTATTTAAACTCTTCTTTTTATGGCGATCAATGTTTGTTTTTGGT
ACTTTTAGGCAAGATCGCACAACCGACAATCCTTATTGTTTCACCAACAA
CGGCAATATTTATAATTCCAATTAAATTTTTTCAGATATGGTGATCGAAC
GCCTTCATTTTGGGCCGCTAGACTTTTTGCAGTAGTCTGGATTTTCTTTG
GTGTCACCTTCTTTGGAATGTATTTGGGCACAATCACATCTGTTATGACC
ACAAATATGCAGGCCAAAATCGAATTTACCATTGAAAACCATAAGGTTTG
TTAAAATTAAATATTTTATTAAGAGTTACGTATAACGCATGGCTTCGGAG
TCGGAGAATTATTTAGCCAACCATGGTCACCACCCCAAGTTTTTTATAAC
CCTTATATTGAAAGTGAAAACTATGGATAAAAGTAAATGGGCTTTTCCAG
AAAAGGATTGAATATGGGGGGGTGGGGTGGTGGAGGATATAACATCTTTT
GGAAATTTACCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCCCCCCCCCCCTCCGCACGAACATTTCCTGGAAGA
GTCCAATACTAAGCATAATATCTAAGATGATCGTCATGAGCATGAGCTAA
GGAATTTGCTCCAATTTTACTCGTTTCATTTTCATTTTTATAAAGGGGTA
CAATAGTGAGAGACAGAATCGTTTTTTGTAACTTTCCTTTTATTTTTTAG
ATTGGCGTGCTTTCTTGGGCGAACGCTGCTCGGCAAGCAACGATCTCGGA
AAAAGGAATACCTCAAAGTATGAAATCTAAATCTGTATAAAAATCGCACA
CTATAAAATTTTTACATAAACTAATTTTTTATAGATAGAAATGATAACAA
GAAGCAGCTTTATTGCTTTTGCTATCAAATATATGTACGGTGGTGTAACA
TCTTTTTCACTTTCACGAATCTCGGCTAGAGTTGCGAAATCTCCAAATTA
CAAAAATCAGTCCCATGTACGGTGCCTTTAAAAAGTTTAAGTAGCATAAT
AATAATTTTTGCGGTAAAAAAATAATGGTATTTACCAGGCTCTTATAACA
TGTCGTTTTTCTATTAGAATACGAAACGGTGGAAGAGTTGATTTCGGCTT
TAAAGAGTAGAGATATACACGGTAAGCACTATAAGCAACAGAATCCATTA
GTAGGGGGCCAATCCTTAGGATCCGTGACATCTTTTATGCGACGCAACCG
CGTGTAGTTAGTTCGAAAGTAGGAAGGTTTTTAAGACTTTTTTTGAGAGG
GGCCCGCGAATTAGGCCCGGCAAAAGTTTTTGTGACTAAAAAACTGAAGT
CNCTTTAGATGGCCGTATTTCTTCGTGCGTTCGAGTAAGAGACTTGTTGT
AGTATACTTTTTTGCCTGTAAAAGTCAGTCTTTTAGTGATAAAAACTTTT
GCCGGGCCTAATTCGCGGTACCCCTCTCTAAAAAGTCTTAAAAACCTTCC
TACTTTCAAACTAACCACATGCAGTTGCGTCGCATAAAAGATGTCACGGA
TCCTAAGGATTGGCTCCTACTTCATAAACTGGCACGCCAGTCGGGCTTGA
ACGGTATCACGCGGGAAAAGTGAGCGTAGGAGATAGGTAAGCGTAAGAAG
AAACTTTGTCGGCGGCAAGCAGGGCTGTNCAGTCGGGCTTGAACGGTATC
ACGCGGGAAAAGTGAGCGTAGGAGATAGGTAAGCGTAAGAAGAAACTTTG
TCGGCGGCAAGCAGGGCTGTTAATCAGGAGTCTCTCACCAACTTTTGGTC
GTTCTCCTACGCAGCTCCTATTCTAGCAAACTCCCGCCGCCTTTATGTTC
CCACCCTCTGACATGATTAATTAACAGACTAGTTTGCTAGTCTTTACTTT
GACAGTCCTCAACTAGCTTGTTTGATATCCCCTTAGTATGCAAATAAGCC
CCGATTACATTTGCCGATAAATGTACCTAATTTCCGCCACCCTGCCTGTG
ACAGGGCTAAGATTTGGATTTCTCAAATTGAAAAGGAAATAAAAGGATAA
ACTTCTTAAAAAATATAAATAATATTCGTTTGATTTCTCACTGGCACTAC
CAACCTAATTCTCTAACACCCATAGTGGTGCATCCAGTAGCCATAGTCGA
AAAGTGGAATATACCTTCGATCACTCAAGCTCCGTGAATAACAGCCAGTA
GGAGACATTCAGTAAATAGTGGGCACCCTCGTAGAAGCAGAAAATACCAC
TTTCCTCTATACGATAAACTTCAGATAACCTTTGAAATATGAATAATTTT
TATATTTTGTTTCCATGTATCTATTTAACGTCGCCCTCCCTATGAACACT
GTCGTCTAAAGTGCCAGCTAGAGTGCCACACCCCAGGGAGAAAAAGACTT
ACTAAACATACCGTATTACTTCAAATAAACACCCCTTTCTTTTAAACAGA
CCTCCTTTAACCCTATTCAGACTAGGGGGGGGGGCTCTTTCTGTTCGGAG
GTGAAACTATTGCTAATAGCTCCTGAAATAATAGAGCTTTTGCCGTGAAA
TTTTCTGTAAATTCCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGGCAAAAACAAAACCGTCCGAAATCCTTCGTAC
TTTCGAACAAGCAACACGCGATGGTCAAAATGTCAAAAGGAGGAGCCAGC
CATTGCTTAATGTTATTATTCTTTAATTTACAGGATATTGCCAAAATAAT
CGCGACGAAGAACATTAAAGCCCTTCTTCTTGATGAGTGCAGTATCAGCC
AGCAGATCATACGGAACATAATCGAACCTTTATCAAAGAAAGTTGATATC
TTATGGATTACACCTCATGCTTTATTCCTATCTACTTTCATGCAAAAAAT
CAGAGAAAGTTAATAATCCAATTTTTCCNCATGCTTTATTCCTATCTACT
TTCATGCAAAAAATCAGAGAAAGTTAATAATCCAATTTTTCCAAGTCCAA
AAAACCCGCCAAATTTGCCCCAAAATTTTTTTTTTCGAAAATCGGGCTCC
GTCACATTCGAGGGTCTATAGTTATGCATCTTTGTGCAAAAAATCATAAA
GAATCAAAGAGCCAATCTCGAGAAAAGCTAATACCTAAGTAATTGATAAT
GTGCTTATATCGAATTTGGCCAGTTTTTCTATAAAAACATGCCAAGCAAC
CAAAATTTCATGTCTAAACACACACATTCTTCAAAAGAAAGCCCTCATGA
GCAAATAAAACATCTATCCCGTTTTTTAGCCGTTTTTTTTTCGAAAATCG
GGCTCCGTCACATTCGAGGGTTTATAGTTATGCATATTTGTGCAAAAAAT
CTGAAAAAACTAATGAGCCAAACACGAGGAAAGCTAATAACGAACGAACG
AACGGACAAAGGTTAATTTATAGGACCTCCACCCCACCGGGGTAGGTCCA
ACAACGAAGATTACCCATAAAAATTTAGCTCATGTTGAAAGTACTCCAAA
GATATCAATTTCCAAACCAAACCAATTTCCAAAGTTTTTTGAATCGGAGA
TCGTTTTATCTCCCAGATTTCTCTTTTTAGGGTAGGGTGCCGTGAAAAAA
GTCCTGCAGGGCCCGCGCCACCGGGGGGGGCCGGGGGGCCATGGCCCCTC
CACTTTTTTGCAAAGCAAAATAAAAAATTTCTCTTCACCTAATAATCTTT
TTCTTTTCTGTGCGCGTGCCAATAAAAACGTTACAACCTTTCTAAGAGGG
GACAGATGGACACTTAAATAAGTCTAATTATACTATTTTATTTTAAAAAA
ACAAACTTAACAGTTTTCTTTCAGAAAATCAGAACAAAAAGGAAGCTGTT
TTAGCCAAATAAGACAGGTCAAAATCGAAAATTTTCCGGCCCGTCCGCGC
AAACCATGGTTGCGCCTCCTTAGTCACTATATTTTTGTTGGCCCCCTCAT
TTTCAAAATCGTGTCGCGGGTCCTGTCCCTCGAATAAATGCCCCTCCTAA
AATACGAAATAAATCATAAACGCCCGTGGCCTTTTATTTGAAGTAAAACG
GTATTCAATTGACCATGTGAAGAATAAGAAGTTTAAGATATTTCAAAATA
GAGCTTATCGCTTTTGATTTATACAAAAATTGAAAAAAAACAAAGACTGT
AATGCAATGCAACATGCTCCACCCCACCAACATAAAAAAGAAAAAAAAGT
GCGTGTCCCATGGTTTCTATTTTTGTTTCATGGGACAAAAAGCGAGAGAA
ATACCCAAAAGACACGCTAATTTTGTCCCTGGGACAAAGTGAATGACACA
CAAATTTTATTAAAAGTGTTGTCGATCTCACTTTTATTGATAGAAAGAAG
AACGAGGTGGAGACACGGGAAAGCGTTTCAGGTTGGTGGTATGGTAATGT
TGCATTGTACCAACGCGAAAATATTTCTCGTGTCCCCAAGCATTTACAGT
TTTTGGTTACCAAATGAAAATTTTCCTCATATAAAGCAAACACATAGCGT
AATAAGACGGATAACTATCCGCTGGATTTAAACAGAACCCTGAAAATTTA
TAAGAAATAGTCCATGGTATACAATCAATATTTTCATCTTTTTAACAGCA
ATCGCATTGGACGAATACATGACAGGTTACTATATCTCAGATATCCAAGA
AGTTATTCCCAAAGCTGCTATCCAAATGGCGAAAAAACCACTACAGGCAG
GGATAGGAGTGGGCACGTATGATAGTCCTATTCGAACTTTGGTCAATAGC
TTTTATGGCGCAAACCACGATAATATATATGATCTGTGGTTTTCCATTGT
TGACGAATTAATGGTAAGATAAGATACACATTTTCCATGTCAATCTAAAT
GTTACAATGGATTCTTGCCCCGGGGGGGGGTACTAGGGTTGGTGAATGAG
GGGTATGTGCGGACGGGACCTCCGAAAACCGACCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGGAAAAAGTGCATTGTAAGGGTAAATTTGA
GAAAATACCAAATTCTGAGGTAAAAATTTCGAAAAATTGCACCATAAGGG
TGCCAAATTTTTCCTTCACTGTAAGGGTCCGATTTTAGATACCTGATTTT
TGGCCGAACGTACGGTCGTTTTCAAAATCGAGTGCCCCCCCGGGGATCGA
CCTCGTAGGTTGAACACACCTTTATAGTAATAATTGTATATAGTAATTAT
AGGTATATAATTGTAAATAGCAAAATATATTGCACGTAATCCACTACATA
AAAAATATCATGATATATGCACAGGTAAAAAAAGATACAGTAATGGAGAA
AAACGATATCGGTTTTTATAATATCCTCTAGTTTTTTTGGTTCATCCCTT
CATACATAAAATGGGTTAAACTTTGACCTGCTACAACATGACATGCATAT
TCAATCTAAAACTCAAGAAACAGCCTATATAATATATTTTGAACCGACGA
AATTCAGAAGATTTTGACAAATCTCGACGTTTTATGCCTTTTATCTGATC
TCGAAAAGAAATCTTCTAAATTTATTCTTACCTATATTTCTTTAAGATTA
GAAGGGTTTACACCTTAACAATTAGTCGAANATAAGAACAAACTATATAA
GAACATAAAGGCTTTGCCGGCTAAAATGTTAAGAACAAGTTAAGAAAAAT
TTAAGGCTTTGTGGGCTCTAAAACACCCAATTTCATAGGAAAATAGACAA
AAATACTCAAAAATTGGCGTAAATAAGAACATGTTTAAAACATTTTTAGG
CTTAAAACTCAAAAAGTTAAGAATATCCAAAGGCTTAAAAATTTTGGATG
CTCTTATAGAAAAACGTGTAGATGAAAAGGACAAGGAGTACGTTTATANC
TGTCATCAAAGTCGCTAGACAAAGTAAAAGAAGAACAACATGAAAAAATA
ATGTAGACAGCATTAAACTTTAATGTACTGCATGCCAAAGCTGAAGACTC
CATAGGAGGCAATAGGAGGGGAGCCATTTGGAATGAAAGAGAAACAAATG
GTATACCATTTTGACATTGCTAATTCATATCATTTACATTGATGTCTTAT
NACACAAGACTGTGGCTGATATCAACAAAAAAGACGATCCGGTGGAACCA
CTGTTTACGTACAAACACCAGTCGTTCACCATTTGTATTGGTTCAGCATT
CGTGTTCTCTTGTCTTTGTGTTATTGTCAACCAAATCATTGTCAACAAAC
GTAAAAACAAGAGAAATTTAACAACAAAATGAGATATGAAGCCGTTATCA
AACATGAAATTATTCTATACCAAACAACTTACAACTTGACTTTGTTTTTT
TTTTTTAACGAAAAGTACAAGACTCCAGGTAAGTGACCTACCGGACGTAC
GGCCATTAAGGGTAGGTTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029647XLOC_029647Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046452-exon-scaffold_110-1575043694:184415..184842TCONS_00046452-exon-scaffold_110-1575043694:184415..184842Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1575043694:175051..175397TCONS_00046452-exon-scaffold_110-1575043694:175051..175397Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1575043694:174502..174596TCONS_00046452-exon-scaffold_110-1575043694:174502..174596Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1575043694:174098..174257TCONS_00046452-exon-scaffold_110-1575043694:174098..174257Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1575043694:173126..173192TCONS_00046452-exon-scaffold_110-1575043694:173126..173192Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1575043694:172772..172825TCONS_00046452-exon-scaffold_110-1575043694:172772..172825Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1575043694:169080..169294TCONS_00046452-exon-scaffold_110-1575043694:169080..169294Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1575043694:166521..167083TCONS_00046452-exon-scaffold_110-1575043694:166521..167083Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1510915933:184415..184842TCONS_00046452-exon-scaffold_110-1510915933:184415..184842Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1510915933:175051..175397TCONS_00046452-exon-scaffold_110-1510915933:175051..175397Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1510915933:174502..174596TCONS_00046452-exon-scaffold_110-1510915933:174502..174596Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1510915933:174098..174257TCONS_00046452-exon-scaffold_110-1510915933:174098..174257Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1510915933:173126..173192TCONS_00046452-exon-scaffold_110-1510915933:173126..173192Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1510915933:172772..172825TCONS_00046452-exon-scaffold_110-1510915933:172772..172825Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1510915933:169080..169294TCONS_00046452-exon-scaffold_110-1510915933:169080..169294Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1510915933:166521..167083TCONS_00046452-exon-scaffold_110-1510915933:166521..167083Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1491911889:184415..184842TCONS_00046452-exon-scaffold_110-1491911889:184415..184842Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1491911889:175051..175397TCONS_00046452-exon-scaffold_110-1491911889:175051..175397Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1491911889:174502..174596TCONS_00046452-exon-scaffold_110-1491911889:174502..174596Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1491911889:174098..174257TCONS_00046452-exon-scaffold_110-1491911889:174098..174257Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1491911889:173126..173192TCONS_00046452-exon-scaffold_110-1491911889:173126..173192Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1491911889:172772..172825TCONS_00046452-exon-scaffold_110-1491911889:172772..172825Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1491911889:169080..169294TCONS_00046452-exon-scaffold_110-1491911889:169080..169294Clytia hemisphaericaexon
TCONS_00046452-exon-scaffold_110-1491911889:166521..167083TCONS_00046452-exon-scaffold_110-1491911889:166521..167083Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_110supercontigscaffold_110:166521..184842 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0619041	0.0402284	0	0.0228487	0.0278222	0.0659613	0.106075	0.124133	0.0522014	0.107706	0.104516	0.109979	5.90911	5.0303	0.866722	0.345469	0.391143	0.607865	11.5413	11.5385	2.44017	1.68758	1.14367	2.02918	1.94077	2.87558	0	0	0	0.0466801
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046452 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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