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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046436 ID=TCONS_00046436|Name=TCONS_00046436|organism=Clytia hemisphaerica|type=transcript|length=1094bp
NNCCTTCAGGAAGCCTCTCTCAGTTAGATTATGTGATTGTAAGAAACAAA
TGGAGGAACAGTGTTCGCAATGCTCAgtcctattcttctttttcttctgt
tgGTTCTGACCACAGAATTGTTTCCTGTCGCATTTCTATTAGCCTTAGAT
CATCTAAAAAGTCTAAACCTGACCCAATGAAATCCATCGATTGACAACAG
GTTTATTGTAACCACGACCTCCGAACTACTTACACTATTGAAGTGAAAAA
TAGATTTGATACATTGGCTCAAGCAGACGACGACATTGAGAAAAGTTACC
GAAATTTGATTAAAGCTAATAAAGAAGTTAGTCTTGCTCTTCtaccaaag
aaacaaaaagtcaaaaagaaatatCTCTTTGAAAACAACCTTGTTTCTGA
TGCACGGAATGCACTTGTAGAGGCCAAACTAAAACATCAGCGACGCCCTa
caagaagaacatcaaaaatccTCTCCGATGCTCAAAAAGCTCTGGATGAT
GCCTACCTTAACGCCGAATCGATGTTTATTCATGGTAAGATAAACTCAAT
TTCCAATCTTCATGTTAGCCATCAGCGCTCGGCCGCTTGGAAAACGATCA
ATGATCTAACAGGTCGAAAAGACCACCCTTCTATTCAGCTGGCTCttaaa
cttcaaacttttaGAAGTCTTGTCGAGCCCATTCTATATGGCTCGGAGAC
TTGGACCATGACAAAAACCATGCTGAAGAGCCTTGATGGCTGCTatacaa
atcttttgaaaagagtCCAAAATCTTGATTGGCGCAACCACCCAACCATT
CAAGAGATATATCATGGACTCCCAAGAATTTCCTCTGTCCTGACTAGCAG
GATGCTCTCTTTCTCAGGTCACTGTTTCCGTGCGAAAAACGAAATGGTGT
CTGAGATCTTACTTTGGTGTCCTGCGGGCACTAGGCGCTCGAGAAAGCGC
ACTTTTCTTGATACTTTGAAACGAGAAACAGCGCTAGAGATTGAGGAACT
GGGCACTGCAATGGCTGATCGAGAGCTGTGGAGGGAGGGCTATTGTTTGT
TTCCGACCTAGGTCCATTCGGACCtaggtcgaaggatgatgatg Run BLAST on NCBI transcript from alignment at scaffold_11:114027..115120 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046436 ID=TCONS_00046436|Name=TCONS_00046436|organism=Clytia hemisphaerica|type=transcript|length=1094bp|location=Sequence derived from alignment at scaffold_11:114027..115120 (Clytia hemisphaerica)
catcatcatccttcgacctaGGTCCGAATGGACCTAGGTCGGAAACAAAC
AATAGCCCTCCCTCCACAGCTCTCGATCAGCCATTGCAGTGCCCAGTTCC
TCAATCTCTAGCGCTGTTTCTCGTTTCAAAGTATCAAGAAAAGTGCGCTT
TCTCGAGCGCCTAGTGCCCGCAGGACACCAAAGTAAGATCTCAGACACCA
TTTCGTTTTTCGCACGGAAACAGTGACCTGAGAAAGAGAGCATCCTGCTA
GTCAGGACAGAGGAAATTCTTGGGAGTCCATGATATATCTCTTGAATGGT
TGGGTGGTTGCGCCAATCAAGATTTTGGactcttttcaaaagatttgtat
AGCAGCCATCAAGGCTCTTCAGCATGGTTTTTGTCATGGTCCAAGTCTCC
GAGCCATATAGAATGGGCTCGACAAGACTTCtaaaagtttgaagtttaaG
AGCCAGCTGAATAGAAGGGTGGTCTTTTCGACCTGTTAGATCATTGATCG
TTTTCCAAGCGGCCGAGCGCTGATGGCTAACATGAAGATTGGAAATTGAG
TTTATCTTACCATGAATAAACATCGATTCGGCGTTAAGGTAGGCATCATC
CAGAGCTTTTTGAGCATCGGAGAggatttttgatgttcttcttgtAGGGC
GTCGCTGATGTTTTAGTTTGGCCTCTACAAGTGCATTCCGTGCATCAGAA
ACAAGGTTGTTTTCAAAGAGatatttctttttgactttttgtttctttgg
taGAAGAGCAAGACTAACTTCTTTATTAGCTTTAATCAAATTTCGGTAAC
TTTTCTCAATGTCGTCGTCTGCTTGAGCCAATGTATCAAATCTATTTTTC
ACTTCAATAGTGTAAGTAGTTCGGAGGTCGTGGTTACAATAAACCTGTTG
TCAATCGATGGATTTCATTGGGTCAGGTTTAGACTTTTTAGATGATCTAA
GGCTAATAGAAATGCGACAGGAAACAATTCTGTGGTCAGAACcaacagaa
gaaaaagaagaataggacTGAGCATTGCGAACACTGTTCCTCCATTTGTT
TCTTACAATCACATAATCTAACTGAGAGAGGCTTCCTGAAGGNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046436-exon-scaffold_11-1491911889:114027..115120 | TCONS_00046436-exon-scaffold_11-1491911889:114027..115120 | Clytia hemisphaerica | exon |
| TCONS_00046436-exon-scaffold_11-1510915933:114027..115120 | TCONS_00046436-exon-scaffold_11-1510915933:114027..115120 | Clytia hemisphaerica | exon |
| TCONS_00046436-exon-scaffold_11-1575043694:114027..115120 | TCONS_00046436-exon-scaffold_11-1575043694:114027..115120 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_11 | supercontig | scaffold_11:114027..115120 . |
Blast
The following BLAST results are available for this feature:
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