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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046432 ID=TCONS_00046432|Name=TCONS_00046432|organism=Clytia hemisphaerica|type=transcript|length=1123bp TGTGCTATACCAGATGAAGACGGAAAGCGCCATCAAACCAATGTTTCACT TCTCACCAATCTTCCCATTGACATGATCAAAGATATTGCTATTGATCCAA TGCATCTGATCTTTCTTGGTGTCACTAGACGACTCCTCTACTATCTCAAA GgttcttttagaaaaatcaaagctGGAAAACTTTCTGCTGCATATTTGAA TGCTATTTCAACTACTTTGAATGAAATCAGACTTCCTACAGAATTTGCAC GTAAAGCAAGAACTTTATCGGAACTAGATAGATGGAAAGCTACAGAACTT AGCTCTTTTTTGTTGTATAGCGGGTTGGTTGTTTTAAAGCCTTATTTATC ATCTCCTGCATTTAAACATTTCCTAAGTTTCTCCATTGCAATCAGATTGC TCAGCGAAGAAGACGCTACTATTCGTAACCGAAATATTGCAGCTGCACGT GATCTTTTGGCTTATTTTGTCAATAATTCACATCTTTATTATGGTGAAAC ATTTTGTGTTTACAATGTACACAACGTGGTCCATCTTCCAGATGATGTCT TTCATTATCGATTGCCTCTTATGAGATTTTCGTGTTTCCAGTTCGAAAAC CATCTCCAAAAAATCAAACGTCTTGTTCGAGGTAGAAATAACCCATTGAG CCAGATCGTGAAAAGATGTGATGAATTAGATGGACGTTATTATCTCAAAA AGCAGATTGAAGTGAAGTATAAACCAGAAGGGAAAGATTCTTGGTTCCTT GCCTCTGGCCTTCTCATCCAGTTGAAAAGAACAGTAGCTCAAGGAGAGTT TTTTTTGCGAAACCTATAAACTTTGTGACCTTTCGTCTTTCTTTAAAGTG TTTGGTATTGATTCGAAAGATGTTGGAATATACGTTTTGAAATCTAATTT GAAATCGACCGAAAAATACTTCAGACAAGATGAGTGTTTGCTTGCCGTAC AAAGAGGACCTTGTTCTTTTTTCCATGTTTCTATAGGTTTATCCTTTATT TTGGTTGATGTAATGTAATACTCAATTGGAAGCCTCAACAATCAAATGTT AAACCTGGTATAAAAATTTGCGAATTGAATTGTGTTGAGCACAGTGTGCA TGATAGATTTTGCGTTGATCTTT Run BLAST on NCBI protein sequence of TCONS_00046432-protein >TCONS_00046432-protein ID=TCONS_00046432-protein|Name=TCONS_00046432-protein|organism=Clytia hemisphaerica|type=polypeptide|length=272bp
CAIPDEDGKRHQTNVSLLTNLPIDMIKDIAIDPMHLIFLGVTRRLLYYLK GSFRKIKAGKLSAAYLNAISTTLNEIRLPTEFARKARTLSELDRWKATEL SSFLLYSGLVVLKPYLSSPAFKHFLSFSIAIRLLSEEDATIRNRNIAAAR DLLAYFVNNSHLYYGETFCVYNVHNVVHLPDDVFHYRLPLMRFSCFQFEN HLQKIKRLVRGRNNPLSQIVKRCDELDGRYYLKKQIEVKYKPEGKDSWFL ASGLLIQLKRTVAQGEFFLRNL Run BLAST on NCBI transcript from alignment at scaffold_11:66360..67482 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046432 ID=TCONS_00046432|Name=TCONS_00046432|organism=Clytia hemisphaerica|type=transcript|length=1123bp|location=Sequence derived from alignment at scaffold_11:66360..67482 (Clytia hemisphaerica) AAAGATCAACGCAAAATCTATCATGCACACTGTGCTCAACACAATTCAAT
TCGCAAATTTTTATACCAGGTTTAACATTTGATTGTTGAGGCTTCCAATT
GAGTATTACATTACATCAACCAAAATAAAGGATAAACCTATAGAAACATG
GAAAAAAGAACAAGGTCCTCTTTGTACGGCAAGCAAACACTCATCTTGTC
TGAAGTATTTTTCGGTCGATTTCAAATTAGATTTCAAAACGTATATTCCA
ACATCTTTCGAATCAATACCAAACACTTTAAAGAAAGACGAAAGGTCACA
AAGTTTATAGGTTTCGCAAAAAAAACTCTCCTTGAGCTACTGTTCTTTTC
AACTGGATGAGAAGGCCAGAGGCAAGGAACCAAGAATCTTTCCCTTCTGG
TTTATACTTCACTTCAATCTGCTTTTTGAGATAATAACGTCCATCTAATT
CATCACATCTTTTCACGATCTGGCTCAATGGGTTATTTCTACCTCGAACA
AGACGTTTGATTTTTTGGAGATGGTTTTCGAACTGGAAACACGAAAATCT
CATAAGAGGCAATCGATAATGAAAGACATCATCTGGAAGATGGACCACGT
TGTGTACATTGTAAACACAAAATGTTTCACCATAATAAAGATGTGAATTA
TTGACAAAATAAGCCAAAAGATCACGTGCAGCTGCAATATTTCGGTTACG
AATAGTAGCGTCTTCTTCGCTGAGCAATCTGATTGCAATGGAGAAACTTA
GGAAATGTTTAAATGCAGGAGATGATAAATAAGGCTTTAAAACAACCAAC
CCGCTATACAACAAAAAAGAGCTAAGTTCTGTAGCTTTCCATCTATCTAG
TTCCGATAAAGTTCTTGCTTTACGTGCAAATTCTGTAGGAAGTCTGATTT
CATTCAAAGTAGTTGAAATAGCATTCAAATATGCAGCAGAAAGTTTTCCa
gctttgatttttctaaaagaacCTTTGAGATAGTAGAGGAGTCGTCTAGT
GACACCAAGAAAGATCAGATGCATTGGATCAATAGCAATATCTTTGATCA
TGTCAATGGGAAGATTGGTGAGAAGTGAAACATTGGTTTGATGGCGCTTT
CCGTCTTCATCTGGTATAGCACA Coding sequence (CDS) from alignment at scaffold_11:66360..67482 >TCONS_00046432 ID=TCONS_00046432|Name=TCONS_00046432|organism=Clytia hemisphaerica|type=CDS|length=819bp|location=Sequence derived from alignment at scaffold_11:66360..67482 (Clytia hemisphaerica) TTATAGGTTTCGCAAAAAAAACTCTCCTTGAGCTACTGTTCTTTTCAACT GGATGAGAAGGCCAGAGGCAAGGAACCAAGAATCTTTCCCTTCTGGTTTA TACTTCACTTCAATCTGCTTTTTGAGATAATAACGTCCATCTAATTCATC ACATCTTTTCACGATCTGGCTCAATGGGTTATTTCTACCTCGAACAAGAC GTTTGATTTTTTGGAGATGGTTTTCGAACTGGAAACACGAAAATCTCATA AGAGGCAATCGATAATGAAAGACATCATCTGGAAGATGGACCACGTTGTG TACATTGTAAACACAAAATGTTTCACCATAATAAAGATGTGAATTATTGA CAAAATAAGCCAAAAGATCACGTGCAGCTGCAATATTTCGGTTACGAATA GTAGCGTCTTCTTCGCTGAGCAATCTGATTGCAATGGAGAAACTTAGGAA ATGTTTAAATGCAGGAGATGATAAATAAGGCTTTAAAACAACCAACCCGC TATACAACAAAAAAGAGCTAAGTTCTGTAGCTTTCCATCTATCTAGTTCC GATAAAGTTCTTGCTTTACGTGCAAATTCTGTAGGAAGTCTGATTTCATT CAAAGTAGTTGAAATAGCATTCAAATATGCAGCAGAAAGTTTTCCagctt tgatttttctaaaagaacCTTTGAGATAGTAGAGGAGTCGTCTAGTGACA CCAAGAAAGATCAGATGCATTGGATCAATAGCAATATCTTTGATCATGTC AATGGGAAGATTGGTGAGAAGTGAAACATTGGTTTGATGGCGCTTTCCGT CTTCATCTGGTATAGCACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00046432-exon-scaffold_11-1491911889:66360..67482 | TCONS_00046432-exon-scaffold_11-1491911889:66360..67482 | Clytia hemisphaerica | exon |
TCONS_00046432-exon-scaffold_11-1510915933:66360..67482 | TCONS_00046432-exon-scaffold_11-1510915933:66360..67482 | Clytia hemisphaerica | exon |
TCONS_00046432-exon-scaffold_11-1575043694:66360..67482 | TCONS_00046432-exon-scaffold_11-1575043694:66360..67482 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_11 | supercontig | scaffold_11:66360..67482 . |
Blast
The following BLAST results are available for this feature:
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