TCONS_00046305 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00046305
Unique Name	TCONS_00046305
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3433

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_108:436935..448808-
coding sequence from alignment at scaffold_108:436935..448808-

transcript sequence

>TCONS_00046305 ID=TCONS_00046305|Name=TCONS_00046305|organism=Clytia hemisphaerica|type=transcript|length=3433bp
ACCACGACGAAAAGAAGACGTCAAATCACCAAGCTGCATACCAATAATTC
TTCATCTATAAAGAATGTTGTATATTCGGTGAGAAGTTATCCGTCCAAGA
TTTAATCATTTACTCAGtgTTGACACGCTATGTTTATATTGTCAAGGGGA
AACATGTTGATGCTTCGATCAACAATACAAAAGAAGGGAAGATAAACAAC
ATGTGACCACTAGCAAGATAGTATGAACTCATTTGAAGGTACATTCAAAT
TGTTACACTCTATTCCTCAACATCACAAGACATCAACAAAGTGAGAAAAC
TTTTAAGTAAAAAAGCCGAGAAATTCATCAATTTAAAGATTAATCATGCA
TGCTATGCAGCAATACAGACAACGCCAACGTAGGCGAAAAATGATCATTG
CTGGCTCAGTGTTCGTTGTTTTGGTTACTGCTATCGCTTGCATTGTTGCT
GCTGCTGCAAAGAAATACGATAACAGTAAATACGCTGATAAATACGTCGC
CAAGTACAATAAATCCGATTCTGATTGGTACGATAAATATGCTAAAAAGT
GGGTAGATAAATACGCTCCTTCTACAACTGCTAAACCGACAACTCAAGAA
CCAACAACTGCAACTGAAGAACCATCTACAACCATGGagtcaacaacaaa
atattcAACACCAGATTATAATGGACACACCACAAATGGTAATAAAGCTG
GATCAGCAATCAAAGGACTCTTAAAACATTTTGGATTGAAAGATGCTGCT
GATGTCACATGGGCACATGCTGTTAACAGCCAAGAAGAGTTAGATGATGC
ATTAGGAGATGAAAAAGTCATGATGCTTGAAGCTGATGTTGTgatggacc
ctgtcagaaataTCCCTATAATGGCACATCCACCAGCAAACAGTAGCGAT
CTAACATTAGAGCAATTCTTAACTCATTCACTCAAACACTCTGAGGAAAA
AGGTATCAAATTAGATTTCAAACAGGATGAAGCTCTAAATGCTTCAATTG
CTGTCATGCAAAAAGCATTCAAGGCACGAGAAACTCCTTTACCACCTATC
ATTTTGAATGCTGATATCTTGGTTGGACCAAACAGCAATGAGAATCAGAC
AACACCAATCAGCCCAGACCTCTTCTTCACAGCTTTGGCTCCATTCAAAA
CCGCAATCCTCTCACCAGGATGGACCACCAAATTCATTGGCAATGTATCT
GAAGGCTACAATAATACTGATGCAAATGAAATGACCAAGCTTATCCAAAA
AAATATCGTCCAACAAGATCTCACATTCCCAGTAAGAGCATCTTTGGTTG
CTTTGAACCCAAAACCAATGCACCTATTATTGAATCAAATGCAGGATAAA
GTATCACTCACTGTTTGGACAGCCAAGAATGATACTTATGATCCAGAAGA
CCTTGGATTCTTGCGCTTGTATGCTAAGaaagttttctttgatttaCCTG
CAGATGAAGTAGAAGCAATTAAGAAAGCAAGTTTTGTCAACAAAATCCCT
GAAGGGTTGATTCCAGACATTGGAAAAGACAACATGCCATTTTAAAAATA
CCAATACTTTCAAGTTGATGACAGaaacaaattttcatgaaatttcatGA
AAGATAACTTTGTTAATAAGaaaacatccctgtctcacagccccggtaga
aattttttcctcagtggggacaaaaactcttattgaaatcccaatgggga
tagaaattctattgtttcaaggttaaaaaatccagtggggctggggtccc
agcgggtttGAGACACAGGGTTGTAAGAAAATAACAAAGTACACTCGAAG
GCAAAATTACCTTTGCCATAACAAGTTGATTCAATcagggggggtcagta
ctaaaatgtaagacatacatgagtactaaaaggattttcactaatttttg
acatacccccacctatttttcgaaaatgttattttagtccacacgtacta
aaattattttgagcaatttaacatagataccacccattttttgccctttt
acggctttaaatttaccaaaatggggtcattgttacaaacctagtcgaat
ttagtgcatcaatctgcaaaataatataattttattactaaactgtgctg
aactgtacataaaaatatttttaaaaaatatttaaaaaattggaaaaatt
ctaaaagatgtctgaagattttttcgaaaattcctgaaaaaaaaaatcaa
attttttgcaaaattgttaaaaaaatgctccatttttgctgattttagaa
caaaatactaagatttttcaaaaatttctttaagggaccaccctttttgg
tattttagtacacatggtactaaaattatttttgagcttttttgcagtac
ccccacgtcactaaatgtcatgatgtttgagattttagtaccgacccccc
ccctgattcAATGTGTATTGAGataattaaaataacaatttaaaTTACTG
TAGTATCGTATTTAATTTCTCCAATTTGATGCGTCCTTTAATTAATGCGA
AGAACTGAGCTTCCTTTTTTCAGACAAGTAAATTCTCTTCATTGTCTTAC
AAAATAGACTTTTTAAAAGTATCCTATTTAGAGtacttgtcttttgtttt
aGTTCGAAGTTATCCTTTTTTTCTCTAATCAATATTACGGTACAAAAGCT
TACACTCTGATGTTTTATAATTTACTTGATCTCTCGTTACCAGTTACCAG
CCTCCCAAAACTAAAATTTGACTGCATTAAATTATAACAGTTGCAGTACT
TTTATATTTCTTCTTTAAAGTTTTTACAGTGTACAGTTGACGGGTTGACG
CTCTATAATTCGACGTTGTATTATTCGATACACTGCGCCAgtatttgata
atattgaaagccaccGTCGCCAAGAAACTCTCCTAGACTTATTCGATAAA
AAGCCAATTCccattgaaaatcaaattagagagcgtcaactgtaatagTT
TTGTGTATACGATTAAGATTCGAGGATATTTGTATAAAAATTGAGAGGCG
AAGTCTAAGAATAACATACCCCGCAACATACTAATAGTTTTTGAAGACCC
CGCCTCCCTCTACGAAAAATCtctctttgtcaaattttctcATTCAGGAA
AAGATAAGGGGTAatatatgaatttttttataatttctcaTTGGATTTGT
TTAACTTTATACACAAATTTCCTCCAAGgtaatttttaagaaattttaat
ttaatatcaGTTAATATACCTTTTTATAAATTCTAGaattaatttttatt
caaaataaatatgatTGACATCCAAACACCAATAGAATGGAAGTTGGTAA
ACATCAAGAAAAATTAGTGACGAAAGCTGAAATACATTCTGTGACGATGA
TATGATAGATCGCGATTCCATTCGAGAACAAAGATGAAAGGTTATTTCCA
ATGATAGAGTGTCATCTCGTAACatgataaaaa

Run BLAST on NCBI

protein sequence of TCONS_00046305-protein

>TCONS_00046305-protein ID=TCONS_00046305-protein|Name=TCONS_00046305-protein|organism=Clytia hemisphaerica|type=polypeptide|length=399bp
MHAMQQYRQRQRRRKMIIAGSVFVVLVTAIACIVAAAAKKYDNSKYADKY
VAKYNKSDSDWYDKYAKKWVDKYAPSTTAKPTTQEPTTATEEPSTTMEST
TKYSTPDYNGHTTNGNKAGSAIKGLLKHFGLKDAADVTWAHAVNSQEELD
DALGDEKVMMLEADVVMDPVRNIPIMAHPPANSSDLTLEQFLTHSLKHSE
EKGIKLDFKQDEALNASIAVMQKAFKARETPLPPIILNADILVGPNSNEN
QTTPISPDLFFTALAPFKTAILSPGWTTKFIGNVSEGYNNTDANEMTKLI
QKNIVQQDLTFPVRASLVALNPKPMHLLLNQMQDKVSLTVWTAKNDTYDP
EDLGFLRLYAKKVFFDLPADEVEAIKKASFVNKIPEGLIPDIGKDNMPF

Run BLAST on NCBI

transcript from alignment at scaffold_108:436935..448808-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00046305 ID=TCONS_00046305|Name=TCONS_00046305|organism=Clytia hemisphaerica|type=transcript|length=11874bp|location=Sequence derived from alignment at scaffold_108:436935..448808- (Clytia hemisphaerica)
ACCACGACGAAAAGAAGACGTCAAATCACCAAGCTGCATACCAATAATTC
TTCATCTATAAAGAATGTTGTATATTCGGTGAGAAGTTATCCGTCCAAGA
TTTAATCATTTACTCAGGTGATAATTTCCATTCCACACAGTACACGTTTT
TAAGCATGTAACTTGTCTATAAGTATAACAGTGGACTACAGTACGGAAAA
AGACATTTATTGAATGTTGTTTTGTCCATATTTTATCTTTTTGTTTAGGC
TTTTGTAAATGTGTTCAACTTCAAGTTTAACTCTCTGTTCCTTAACTTGT
TTTCTTACTCTCAGCCTGGACAGTTCCTTATTTTTCGGACCATTTTCGGT
CTCAAGTCACTTATAAACGTGTTCCTTTTAAAAAAATGACGTGTATTCCT
TTCTCATCATAACGCTTCTAAGCATACAAAGATTGGGATTTCGGGCTTGG
AAACTATAGTCAGTTTTCAAACAGTTTCCCTCTGATTAGAAAAGGACAGA
AAGATAAAGAATAGACTGGAGTAGAATCAAGAAAGAAGGGCAATGGAAAG
ATTTTTTTTAAACCACCATGGTAAGATAAGCTTTTTTAAATTTTGAGCGC
TTTTAAGGGTTAAAAATAAAGTGAAATAGTCTCTAAAATAGTTTATGTTC
GAAGCATTTTTTCAATCAAAACATTTTAGTTGCTTTTACAACATAGACAA
AGGTTGATATGGGTTGTACTAAGCGACCATGTTATTTGTTTACATTTCCT
TGTCAATTTAGTTGTTTTAAGTATACTTGTATGGGAAATGACGAAATTTT
ATGTCAGGGAAATTCAATTACCTCACTAAGGGACCACTTACATATCGATG
TTTCCCACGACTAACGTTAAATTTACACGAGTAGTGGGGGTGTCAGAGGT
AATGATGCTATGATAATCGATCAAAACATCGATTCTCGGAGCTGATTGAG
CAAGCCAGATAGTTTTTGATTTTGTAAACTACTCTCGCTCTACGCATAGT
TTTGTCGTCAATTTTTTTATGTTGGAGTCTTGGACTAAGCATCATTTTGA
CGTTAGTCTTGGGAAGAATCGATATGTGAGTGGCCCCTAAATACAACGAT
TTTTTTGATACGCTAAAGACACACTGTATAAGTGACCAGGTGACAGGTGA
CAGGTCAATCCAAAGGCAATGCATGGTAGTCCCCAGAGGGCCTATCTTTG
ACGGCCAATATCTCCAAAACGAAGAAAATTCCAAACCTTTTGAAGAAAAT
AGGCTGGTTTTGAGTCACCCCTTCCCATTTAGCGTTGTCTTGTTAAAGCA
AGAAGTTTATTTGAAAATTCTTAATATTTTTTCAAAAGTTGCAAAGCTTT
GGGCTGTAAGGCTTAAAGGTTAATTAGCTTCACAGCATTGTAGGATATTG
TAAAAATTAATTTGTCTTTTGCAGTTAGAATAAGACGTGGGTCTGTGACA
CGGGTATGGAATAGATTGAGCATTCTAACTTCCATGTAAATTTAAACGTT
TTTTTGACCTACCTCCGGGTACCGTAAAATAAAGCACCAGGAGCCTCTGG
TCTAACCACAGCCATGTTTAAATCACTTGTTGAAGATGAACTCTGTTTCG
AATATCTCGTTATGAATCTCGTCGATATATGGGAAAAGAACATTTATCCC
TCTCAATGGGACCTGGGTAAACTTGTGATCCTACCCAAAAAAGGAGACCT
CTCAAAACCAGGAAATTATAGGGGTATAATGCTCCTTGAAACCGCGTATA
AAGTCTTAGCAATATTGATACACAGCAGATTACAACCATTTATAGAAAGT
CTTGACCACGAATCACAATGTGGTTTTCGACAAGGTAGAGGATGCATGGA
TGCCGCTTTCTCTGTCAAACTTGCCCTTAAAAAACGTAGAGAACATAACC
TTGAAACTTGGGTACTTTTTCTCGACCTCGTTAAAGCGTTCGACAGAGTA
CCAAGGTCGTTATTATGGGAAGTATTGTCAAAATTTGGACTACCAGAGAA
ATTGATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNACCGAAGAAGCTAAAAGCACTGTTTACAAGTCACTGATTCTT
CCTATTCTAATCTATGGGGCAGAAACATGGTGCTTAACTGAATACCTGTT
ACGTCTACTACGCAACGTTCACCATTCTTGTTTACGTTCGATGTGTCGCA
TCAATCGCTCACATGTATTTTTATACAGAATAACAACCGATTCACTGTTT
GAGAAGCTAAATATTGAGCCAATTGAGTATTATGTTTTCAATCGTCAATT
GTCCTGGTTGGGCCATGTGGCACGTATGTCTTTCGATAGAACACCTCGGA
AATTGTTGTCTTGTTGGGTGCACAATCGTCGTTTGAAAGGCTCCCCTGAG
TTTACATATGGAAGAGGGGTGTATAAATCTCTTAAATGGTTCGATATTAA
TAGAGCATCTTGGTATAATCTGGTTTTTGATCGTGGTGTATGGAAAAAGT
TGATAAATGTTTAATGTTGAAATGCTAGATTTTCTTATAGCTTTTACATC
TTTGATAATAGTGTTGTTGTTTTTATTTGTCCCTAGCGTAGTGATTTCCT
AAAATTTATATTTAACATATTTTTTTAGGCCAGTTCCTCTGATAGGATGG
ACCACTCTCTCTCTCCCTCCGGGTACCCCGGTGGAGGTCCTTTAAATTAA
CCCATGTCCGTTCGTCCGTCCGTTCGTCTGTTGGCAGCTTCTCTCGAGCT
GTACTTTATATTTTTTTATGAAATTTTGCACAATGATGCAAAATGGCAAT
GCCCGAAATGTGATGGAGCCAGATTTTCGGAAATACAGCTCGAGAAATTC
AAGAAATACTGTCTTTCCGGCGAAAATAGGTTGTTCCGGTGATTTTTGAA
TAGTTCCGGCTTCAAAAATCAATTTTATTGAAAATTGAAACATGCTTGAT
GGTGGGCATTGCTATTAATAATGTTTTTGAATGACCAATTATAAGGAAAA
AGTCCAATGAAAATCCAGAAAAACGGTGATATCCGGCATATTTTCTCAAA
AATCGGACTCGGCCATGTTTTGGGCATTGTTAATACGCATCTTTGAGCAA
AAAATCAGAAAAAACTAATGATAAAATCTCGAGAAAGTGCCAAAAAACCA
TTTTTTCCGGGATATTTCCGGCATTTTCGGCCCGATTGTTAAGAAAAAAT
TTTTTCCGGCCGGAAATATGCCGGAAATCGCCGTTTTTCTGGATTTTCAT
TGGACTTTTTCCTTATAATTGGTTGTTTTTTTTTCATTCAAAACAATTAT
TAATAGCAATGCCCACCATCAAGTATGTTCCAATTTTCAATGAAACTGAT
TTTTGAAGCCGGAACTATTCAAAAATCGCCGGAACAACCTATTTTCGCCA
GAAAGACAGTATTTCTTGAATTTCTCGAGCTGTACTTTATATTTTTTTTA
TGAAATTTTGCACACTGATGCAAAATGACAATACCTAAAATGCGACGGAG
CCCGATTTTCGAAAAACATTTATGCTGGAAAAACCCCTTTTTTTGACCTT
TTCTCGAATTTTCATCCTTATTTTTCTCTGATTTTCTGCAGAATGATGCG
TATTCGCAATGCTCAAAACATGACCGAGTTCGATTTTTGAGAAAATGTTT
TTTCCGGACAAAAAAGCCGGAAATTTCCGTTTTTCAGATTTTCATTGGAT
TTTTTCGTTTCATGTCTTTGTTTGTTTTAAAACAAAAACATCATTTATAA
GAATGTCCACGATTATGGTTCAATGGTTCAATTTTCAATGTAACTGATTT
TGGTACAGGAACTTTCTAAAAATCGCCAGAACAGCCGAGAATCGCCGGAT
TCCATGAATTTCTCGAGTTGTTCTCGTATTATTCTGCATTTTAATACTAT
TGCTCTCATTTTTCAATTGTCTTATTACATCAATCTTCAGGTAGGTCTAT
TCAGCATGTACCTTGTTTTTATATGAGTAACCAGGCTGCTTAGACCCGAG
GACTCAAATTAGCAGCAGAAGCTTTTTGATAATCTAACATGGCAAACGCC
CGGGGGAGGTACTAGGGTTGCGAGCTGACGGGGGTGCCGCCCGACTTTCG
AACTTTGGACCCTTACCGGGACTAAAAAGGAGAAAACAAACGAAAATTTT
GGGAATTTTACGACCCTTAGCGGGACAAATTTGACCAATTTTGACCAAAT
TTCGATCTTTCAGGGGGTAAAAAGTTGAAATTTTCCTATTTTCCGACCCT
TAGCGGGACAAATTTGACCAATTTTGACCAAATTTCGATCTTTCAGGGGG
TAAAAAGTTGAAATTTTCCTATTTTTCCGACCCTTAGTGGGACTGAAATT
TGATTTTTCCGACCCTTAGCGGGACTTTGGAAGTCCAAAAAAGGTACCCA
CCCTCCATTTGCCTAAGTATCCCCCCCCCGGGGGCAAACGATAGCCCTTG
ACCAAATAAGTATAGGGTTTTCGAAGCAAATTTTTTAGAAAGTGAGCTAG
AATATGCTCTGGAATGCTACACAACCCTGTCGACATGACCCGAAAATTAT
AGTTGCTTATAATAATTTGTCGAAATGTAAAAGAAGTCTAGAAAAGGGGA
AATGATTCGATTATTGATGAAGTGACTCGGTTTGTTCTAATTTCTCTGAT
ATCCTCCTAATCCTATGTAACGATTACTTGTTAACTTGAATATGCGCCTT
GCCCCAATTCGGTAGATATTGTAAACATAGATGTCTAGTTAGGAGTGTTA
ATATTTTATCTCCTGTCTTATATTTACACTTTACGGGGCTTTTCATGTAC
CCTCTATACAGAACGCGTCAAACTCCTTTCTTGAATCACAAAGTGAAGTC
CAACGTTGCGAAGTCTCTATACTCGATTTTAATCTGTTTCGTGTCAGGGC
ATGTTTAACCGCAAGAGAAAGCTCTACTTCTCGTCTAGTGTTTCATTTTC
AAAACAAAGTTAAAACACATGCGTAGATTTTTATTTTATAAACTGTTACA
GGCACGACGCAACGGGTATGGCAGTTACGGTGGCCGCCGTACCAGATTTT
CAAAAAAAACCCGAGATTTTCCTCTTCGTTGGTTAAATCGCAATTAAATT
GCTTAAATTTCCTCATTCTCCGTACCAGATATAAAAGGCTTTCGTCGTGT
CTGTGCTATAGTAATTATTATCCGCAAAACACAAAAAGGAATGAATGCGT
GGTACATTTTCGGTCGGTGTTGTGGATGGTGAAATTTGTCGTTCTTTTTT
AATGTTGCCAAGTAGGCACTTTCTCGCCCTCTTAAGTCAAATTTGGATGC
TCTGAAAAATAAAAAATGCTGATCAGAAAATCCCCGGAAATTTTTTGGAT
GACCTTTTATACAAAGTTGTGAAATATTATAAAATGCGCACAAGGAAACC
TGTTTATTGCAACCGGCATTTCTATATGATGATTATGGCGTTATTTTTTT
CATTTTGTTTATTTTAGTGTTGACACGCTATGTTTATATTGTCAAGGGGA
AACATGTTGATGCTTCGATCAACAATACAAAAGAAGGGAAGATAAACAAC
ATGTGACCACTAGCAAGATAGTATGAACTCATTTGAAGGTACATTCAAAT
TGTTACACTCTATTCCTCAACATCACAAGACATCAACAAAGTGAGAAAAC
TTTTAAGTAAAAAAGCCGAGAAATTCATCAATTTAAAGGTTAGTGAGAGC
ATCAATTTTATTCAAAATAACTTTAATCCTAAAGGCTGGTATCCACTTTC
GCGCGAAATTGGCGACAGTTATTTTCTCAACCTTTTTTGCCTAAAGAAAA
GATTACGTCATAAAATGCATAGTTTCGCGCCAACAAAAAAAAAGTCGAAG
GAAGTTCAAATTTTTTCAACCGTACATCAATTTTCACCAGTTGCAATTGC
CTTATTTTTCTATCGACAATGACCTTACAAAAACGTTCAAAATGTTTCGC
CCTTTTCGCGCGAAAGTGGAGACGGCCTTAAGACTGAAGTCTATGGTAAT
AAGATGTGCTAAAATACCTCTAAAGTGGAGCTAGCGAAAGAAATTCCTTG
TGTGTAGTAGAGTATTACTTGATGATGAAAAATGGAATGTCCGTATGGAA
ATTGGCCATAGAACCTTGGTAATGCATAAATGCCCCCCCCCAGCGGTTTG
CGTGATTGCGTGAATGGGCATTTTCGGTTGCGTGAATGCGTGAATTGAAA
AAACTTGCGTGAGCGTGAAAATGCACTTTTTGATTGCGTGAAAGCGTGAA
TCTGGGCTATCTTGTGCGTGAATACGTGAATTTTCGCTTTTTTCCACCGA
TTATATGCAGTTTTCCCGATTTTCCAACGTTTCCCCGATTTTTCCCGAAA
AAATTCCGGTTTCTGAAAAATCGGGTTATTGCGTGAAACTCGAGGAAAAT
TTGCGTGAATGCGTGAATTTCGAAAAAAAATTGCGTGATTGCGTGAATTG
AGGGTCCGCTGGGGGGGCCTCATAAATGGGCGGTGTAGTACCCCTTTGTC
ATTGAGATATTATAATTCAATTTTATTGCACATATACCTCTAGCAGCGTT
TTTATTACTCGCAACCCTGTGAAAGACAAAGGGCCACATAGGGTAATTAT
GAATAAATTGAAATCTGAGAACCAACCCGCTGTAATTTCGGTATGATATT
CACTCTCGCTGTATGATATCTTTCTACACAACGTCTTTCAGATTAATCAT
GCATGCTATGCAGCAATACAGACAACGCCAACGTAGGCGAAAAATGATCA
TTGCTGGCTCAGTGTTCGTTGTTTTGGTTACTGCTATCGCTTGTAAGATT
TCGTGATTTCTTCTTTTTGTTATTGTTGCCAGATATGCAATAGACTAGCA
AGTGTCTGCCTTTCCTTAGACAAAGGAACGCGGGGAAGAGTGCTTATAAA
GAGTTCTTATAAAAAATAGAAATTGATGGCTATATTTCTACTTTCTAAAT
AACTTGATTTTTTACAAAAACACTATCAGATTTTATTTCAGTCAAGGGAA
ACACCATTCATATACAAGTGTCTAGATTAGTCAAATAATAGGATAAAATA
AAAAAAAAGAGAGAGAATCCTAAATGCTCTAGAGACCGAACGATAAAATG
ACGAAAAGTCAATCTAAATGCAAGCATTGCACGAAAATGCATTATAAATA
TCATCAATGTACAGAAAAGATTTGTACTGTTACATTTGTTTAATTGATGC
TGTCTGTATGGGGTGTATTTTTTAAAGTTTTTTTGATTTTATCTGATTTA
TTTAACTTATCTGTTAATTTTCTAGACAGTAGATAGTTATCAAAGATATG
AGCGAAGGATCTTGTATATGAATGGTATTTTCCGGGGAGTGTACGGGGTT
TGCGATTTCCGAAATACCGAATAATTTTGCCAAAATTTTTGAAATTCCGT
AAAAAAATACTTGCAATTCCAATACCGATTTTTTTGGATATTTTTTCTCG
TTTTGACAAATTTTTCATCGAATCGTGATTTTTCATGTATGAATTCCGAA
AAAGGGGGATAAAAACTTTATAATACCGAAATTTCGAAGCGAAAATTCAT
GGATTTTGGATACCGAAACAACAGAATTCCGAAATACCGAAGGAATTTTG
CCCGATTTCCGAAATTCCAAAGAAAAAAGGGTCGATTTGGGGCCGTCCAC
ATAGTACGTACGCACTAAAATGTTGAAAATCGAGTACCCCCCCCTGCTCG
GTTGAAAAAAATTTCCAATTCAAATCGTTTGGTTCGGACCTTAATTTCAT
ACATCGATGTAACTCGGTGTTAATTAAGAAACGTTTTCTTTTCCTTGATG
CGTATAAAAAGCGTAAAAATTGACAAAAAAAAACAAGCAAAAAAAGGCTA
CGAAAAAGATTTCTCTGCGTACGTACATTTTCCTTTGACCCCTCCCCTCC
CCCTTTACGCAAAAAACATACGCTTTTGAGAAGTGGAGTCTTCTCCCCCC
CCCCCCTAGTGCGTACGTACTATGTGGAAGGCCCCTTTCCGCAATTCCGA
AATACTGTACTCCCCCTTTTCTTTGTCCAAAAATAAAATCTGATAGTGTT
TTTGTAAAAACAAGATTAATTAGAAAGTAGATATAGTACAATTGGGGATG
GGAATTTTCACTAGCTACAGGAGTAAGAGATTCGTTATCAATGAACAAAC
AAAACTCAAAATAATTCTAGAACATCCCTTTCTCACAGACCCAGTAGGAT
TTTACAACCAGTGGGGATAAAAATCACGGGCTCAAACTCGATGGGGATTG
ACATTTCCATAGTTTTTATGGGGATTTCAATTCAAAGGGGGGACTCTAAA
GTCAAAAGTAGTGTTGATTTTAACCACGAAGTCATCAAATGGTCTTGTCT
GAAAATTTTATTTTTATTATTTCTTCTTAGGCATTGTTGCTGCTGCTGCA
AAGAAATACGATAACAGTAAATACGCTGATAAATACGTCGCCAAGTACAA
TAAATCCGATTCTGATTGGTACGATAAATATGCTAAAAAGTGGGTAGATA
AATACGCTCCTTCTACAACTGCTAAACCGACAACTCAAGAACCAACAACT
GCAACTGAAGAACCATCTACAACCATGGAGTCAACAACAAAATATTCAAC
ACCAGATTATAATGGACACACCACAAATGGTAATAAAGCTGGATCAGCAA
TCAAAGGACTCTTAAAACATTTTGGATTGAAAGATGCTGCTGATGTCACA
TGGGCACATGCTGTTAACAGCCAAGAAGAGTTAGATGATGCATTAGGAGA
TGAAAAAGTCATGATGCTTGAAGCTGATGTTGTGATGGACCCTGTCAGAA
ATATCCCTATAATGGCACATCCACCAGCAAACAGTAGCGATCTAACATTA
GAGCAATTCTTAACTCATTCACTCAAACACTCTGAGGAAAAAGGTATCAA
ATTAGATTTCAAACAGGATGAAGCTCTAAATGCTTCAATTGCTGTCATGC
AAAAAGCATTCAAGGCACGAGAAACTCCTTTACCACCTATCATTTTGAAT
GCTGATATCTTGGTTGGACCAAACAGCAATGAGAATCAGACAACACCAAT
CAGCCCAGACCTCTTCTTCACAGCTTTGGCTCCATTCAAAACCGCAATCC
TCTCACCAGGATGGACCACCAAATTCATTGGCAATGTATCTGAAGGCTAC
AATAATACTGATGCAAATGAAATGACCAAGCTTATCCAAAAAAATATCGT
CCAACAAGATCTCACATTCCCAGTAAGAGCATCTTTGGTTGCTTTGAACC
CAAAACCAATGCACCTATTATTGAATCAAATGCAGGATAAAGTATCACTC
ACTGTTTGGACAGCCAAGAATGATACTTATGATCCAGAAGACCTTGGATT
CTTGCGCTTGTATGCTAAGAAAGTTTTCTTTGATTTACCTGCAGATGAAG
TAGAAGCAATTAAGAAAGCAAGTTTTGTCAACAAAATCCCTGAAGGGTTG
ATTCCAGACATTGGAAAAGACAACATGCCATTTTAAAAATACCAATACTT
TCAAGTTGATGACAGAAACAAATTTTCATGAAATTTCATGAAAGATAACT
TTGTTAATAAGAAAACATCCCTGTCTCACAGCCCCGGTAGAAATTTTTTC
CTCAGTGGGGACAAAAACTCTTATTGAAATCCCAATGGGGATAGAAATTC
TATTGTTTCAAGGTTAAAAAATCCAGTGGGGCTGGGGTCCCAGCGGGTTT
GAGACACAGGGTTGTAAGAAAATAACAAAGTACACTCGAAGGCAAAATTA
CCTTTGCCATAACAAGTTGATTCAATCAGGGGGGGTCAGTACTAAAATGT
AAGACATACATGAGTACTAAAAGGATTTTCACTAATTTTTGACATACCCC
CACCTATTTTTCGAAAATGTTATTTTAGTCCACACGTACTAAAATTATTT
TGAGCAATTTAACATAGATACCACCCATTTTTTGCCCTTTTACGGCTTTA
AATTTACCAAAATGGGGTCATTGTTACAAACCTAGTCGAATTTAGTGCAT
CAATCTGCAAAATAATATAATTTTATTACTAAACTGTGCTGAACTGTACA
TAAAAATATTTTTAAAAAATATTTAAAAAATTGGAAAAATTCTAAAAGAT
GTCTGAAGATTTTTTCGAAAATTCCTGAAAAAAAAAATCAAATTTTTTGC
AAAATTGTTAAAAAAATGCTCCATTTTTGCTGATTTTAGAACAAAATACT
AAGATTTTTCAAAAATTTCTTTAAGGGACCACCCTTTTTGGTATTTTAGT
ACACATGGTACTAAAATTATTTTTGAGCTTTTTTGCAGTACCCCCACGTC
ACTAAATGTCATGATGTTTGAGATTTTAGTACCGACCCCCCCCCTGATTC
AATGTGTATTGAGATAATTAAAATAACAATTTAAATTACTGTAGTATCGT
ATTTAATTTCTCCAATTTGATGCGTCCTTTAATTAATGCGAAGAACTGAG
CTTCCTTTTTTCAGACAAGTAAATTCTCTTCATTGTCTTACAAAATAGAC
TTTTTAAAAGTATCCTATTTAGAGTACTTGTCTTTTGTTTTAGTTCGAAG
TTATCCTTTTTTTCTCTAATCAATATTACGGTACAAAAGCTTACACTCTG
ATGTTTTATAATTTACTTGATCTCTCGTTACCAGTTACCAGCCTCCCAAA
ACTAAAATTTGACTGCATTAAATTATAACAGTTGCAGTACTTTTATATTT
CTTCTTTAAAGTTTTTACAGTGTACAGTTGACGGGTTGACGCTCTATAAT
TCGACGTTGTATTATTCGATACACTGCGCCAGTATTTGATAATATTGAAA
GCCACCGTCGCCAAGAAACTCTCCTAGACTTATTCGATAAAAAGCCAATT
CCCATTGAAAATCAAATTAGAGAGCGTCAACTGTAATAGTTTTGTGTATA
CGATTAAGATTCGAGGATATTTGTATAAAAATTGAGAGGCGAAGTCTAAG
AATAACATACCCCGCAACATACTAATAGTTTTTGAAGACCCCGCCTCCCT
CTACGAAAAATCTCTCTTTGTCAAATTTTCTCATTCAGGAAAAGATAAGG
GGTAATATATGAATTTTTTTATAATTTCTCATTGGATTTGTTTAACTTTA
TACACAAATTTCCTCCAAGGTAATTTTTAAGAAATTTTAATTTAATATCA
GTTAATATACCTTTTTATAAATTCTAGAATTAATTTTTATTCAAAATAAA
TATGATTGACATCCAAACACCAATAGAATGGAAGTTGGTAAACATCAAGA
AAAATTAGTGACGAAAGCTGAAATACATTCTGTGACGATGATATGATAGA
TCGCGATTCCATTCGAGAACAAAGATGAAAGGTTATTTCCAATGATAGAG
TGTCATCTCGTAACATGATAAAAA

Coding sequence (CDS) from alignment at scaffold_108:436935..448808-

>TCONS_00046305 ID=TCONS_00046305|Name=TCONS_00046305|organism=Clytia hemisphaerica|type=CDS|length=2400bp|location=Sequence derived from alignment at scaffold_108:436935..448808- (Clytia hemisphaerica)
GCATTGTTGCTGCTGCTGCAAAGAAATACGATAACAGTAAATACGCTGAT
AAATACGTCGCCAAGTACAATAAATCCGATTCTGATTGGTACGATAAATA
TGCTAAAAAGTGGGTAGATAAATACGCTCCTTCTACAACTGCTAAACCGA
CAACTCAAGAACCAACAACTGCAACTGAAGAACCATCTACAACCATGGAG
TCAACAACAAAATATTCAACACCAGATTATAATGGACACACCACAAATGG
TAATAAAGCTGGATCAGCAATCAAAGGACTCTTAAAACATTTTGGATTGA
AAGATGCTGCTGATGTCACATGGGCACATGCTGTTAACAGCCAAGAAGAG
TTAGATGATGCATTAGGAGATGAAAAAGTCATGATGCTTGAAGCTGATGT
TGTGATGGACCCTGTCAGAAATATCCCTATAATGGCACATCCACCAGCAA
ACAGTAGCGATCTAACATTAGAGCAATTCTTAACTCATTCACTCAAACAC
TCTGAGGAAAAAGGTATCAAATTAGATTTCAAACAGGATGAAGCTCTAAA
TGCTTCAATTGCTGTCATGCAAAAAGCATTCAAGGCACGAGAAACTCCTT
TACCACCTATCATTTTGAATGCTGATATCTTGGTTGGACCAAACAGCAAT
GAGAATCAGACAACACCAATCAGCCCAGACCTCTTCTTCACAGCTTTGGC
TCCATTCAAAACCGCAATCCTCTCACCAGGATGGACCACCAAATTCATTG
GCAATGTATCTGAAGGCTACAATAATACTGATGCAAATGAAATGACCAAG
CTTATCCAAAAAAATATCGTCCAACAAGATCTCACATTCCCAGTAAGAGC
ATCTTTGGTTGCTTTGAACCCAAAACCAATGCACCTATTATTGAATCAAA
TGCAGGATAAAGTATCACTCACTGTTTGGACAGCCAAGAATGATACTTAT
GATCCAGAAGACCTTGGATTCTTGCGCTTGTATGCTAAGAAAGTTTTCTT
TGATTTACCTGCAGATGAAGTAGAAGCAATTAAGAAAGCAAGTTTTGTCA
ACAAAATCCCTGAAGGGTTGATTCCAGACATTGGAAAAGACAACATGCCA
TTTTAAATGCATGCTATGCAGCAATACAGACAACGCCAACGTAGGCGAAA
AATGATCATTGCTGGCTCAGTGTTCGTTGTTTTGGTTACTGCTATCGCTT
GCATTGTTGCTGCTGCTGCAAAGAAATACGATAACAGTAAATACGCTGAT
AAATACGTCGCCAAGTACAATAAATCCGATTCTGATTGGTACGATAAATA
TGCTAAAAAGTGGGTAGATAAATACGCTCCTTCTACAACTGCTAAACCGA
CAACTCAAGAACCAACAACTGCAACTGAAGAACCATCTACAACCATGGAG
TCAACAACAAAATATTCAACACCAGATTATAATGGACACACCACAAATGG
TAATAAAGCTGGATCAGCAATCAAAGGACTCTTAAAACATTTTGGATTGA
AAGATGCTGCTGATGTCACATGGGCACATGCTGTTAACAGCCAAGAAGAG
TTAGATGATGCATTAGGAGATGAAAAAGTCATGATGCTTGAAGCTGATGT
TGTGATGGACCCTGTCAGAAATATCCCTATAATGGCACATCCACCAGCAA
ACAGTAGCGATCTAACATTAGAGCAATTCTTAACTCATTCACTCAAACAC
TCTGAGGAAAAAGGTATCAAATTAGATTTCAAACAGGATGAAGCTCTAAA
TGCTTCAATTGCTGTCATGCAAAAAGCATTCAAGGCACGAGAAACTCCTT
TACCACCTATCATTTTGAATGCTGATATCTTGGTTGGACCAAACAGCAAT
GAGAATCAGACAACACCAATCAGCCCAGACCTCTTCTTCACAGCTTTGGC
TCCATTCAAAACCGCAATCCTCTCACCAGGATGGACCACCAAATTCATTG
GCAATGTATCTGAAGGCTACAATAATACTGATGCAAATGAAATGACCAAG
CTTATCCAAAAAAATATCGTCCAACAAGATCTCACATTCCCAGTAAGAGC
ATCTTTGGTTGCTTTGAACCCAAAACCAATGCACCTATTATTGAATCAAA
TGCAGGATAAAGTATCACTCACTGTTTGGACAGCCAAGAATGATACTTAT
GATCCAGAAGACCTTGGATTCTTGCGCTTGTATGCTAAGAAAGTTTTCTT
TGATTTACCTGCAGATGAAGTAGAAGCAATTAAGAAAGCAAGTTTTGTCA
ACAAAATCCCTGAAGGGTTGATTCCAGACATTGGAAAAGACAACATGCCA
TTTTAAATGCATGCTATGCAGCAATACAGACAACGCCAACGTAGGCGAAA
AATGATCATTGCTGGCTCAGTGTTCGTTGTTTTGGTTACTGCTATCGCTT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_029560	XLOC_029560	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00046305-protein	TCONS_00046305-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00046305-exon-scaffold_108-1575043694:448692..448808	TCONS_00046305-exon-scaffold_108-1575043694:448692..448808	Clytia hemisphaerica	exon
TCONS_00046305-exon-scaffold_108-1575043694:442621..442841	TCONS_00046305-exon-scaffold_108-1575043694:442621..442841	Clytia hemisphaerica	exon
TCONS_00046305-exon-scaffold_108-1575043694:441517..441617	TCONS_00046305-exon-scaffold_108-1575043694:441517..441617	Clytia hemisphaerica	exon
TCONS_00046305-exon-scaffold_108-1575043694:436935..439928	TCONS_00046305-exon-scaffold_108-1575043694:436935..439928	Clytia hemisphaerica	exon
TCONS_00046305-exon-scaffold_108-1510915933:448692..448808	TCONS_00046305-exon-scaffold_108-1510915933:448692..448808	Clytia hemisphaerica	exon
TCONS_00046305-exon-scaffold_108-1510915933:442621..442841	TCONS_00046305-exon-scaffold_108-1510915933:442621..442841	Clytia hemisphaerica	exon
TCONS_00046305-exon-scaffold_108-1510915933:441517..441617	TCONS_00046305-exon-scaffold_108-1510915933:441517..441617	Clytia hemisphaerica	exon
TCONS_00046305-exon-scaffold_108-1510915933:436935..439928	TCONS_00046305-exon-scaffold_108-1510915933:436935..439928	Clytia hemisphaerica	exon
TCONS_00046305-exon-scaffold_108-1491911889:448692..448808	TCONS_00046305-exon-scaffold_108-1491911889:448692..448808	Clytia hemisphaerica	exon
TCONS_00046305-exon-scaffold_108-1491911889:442621..442841	TCONS_00046305-exon-scaffold_108-1491911889:442621..442841	Clytia hemisphaerica	exon
TCONS_00046305-exon-scaffold_108-1491911889:441517..441617	TCONS_00046305-exon-scaffold_108-1491911889:441517..441617	Clytia hemisphaerica	exon
TCONS_00046305-exon-scaffold_108-1491911889:436935..439928	TCONS_00046305-exon-scaffold_108-1491911889:436935..439928	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_108	supercontig	scaffold_108:436935..448808 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.24478	0.880492	0.992678	0	1.67873	1.32655	2.40064	0.749151	1.049	1.88323e-08	5.04473	3.31621	0.827899	0	0.349563	1.88683	0.46225	1.39865e-09	2.64657	0.671827	0.601788	0.880593	1.42694	1.03588	1.21395e-10	1.98193e-10	0.85341	0	0	0.703849

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR019356	DUF2181

Blast

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BLAST of TCONS_00046305 vs. Swiss-Prot (Human)
Match: F151B (Protein FAM151B OS=Homo sapiens GN=FAM151B PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.340e-34
Identity = 98/273 (35.90%), Postives = 152/273 (55.68%), Query Frame = 1

Query:  700 GSAIKGLLKHF------GLKDAADVTWAHAVNSQEELDDALGDEKVMMLEADVVM---DPVRNIPIMAHPPANSSDLTLEQFLTHSLKHSEEKGIKLDFKQDEALNASIAVMQKAFKARETPLPPIILNADILVGPNSNENQTTPISPDLFF-TALAPFKTAILSPGWTTKFI-GNVSEGYNNTDANEMTKLIQKNIVQQDLTFPVRASLVALNPKPMHLLLNQMQDKVSLTVWTAKNDTYDPEDLGFLRLY--AKKVFFDLPADEVEAIKKA 1479
            GS  + +L++F        +D A++TW HA N + + ++AL      M+EADV++       + PIMAHPP  +SD TL+++LT  +K +  KGIKLDFK    +  S+ +++   +  + P   + +NADIL GPN N   +  I    F  T ++ F     S GWTT +    V+EGY+ T   EM  +   N + Q +TFPVRA+LV  +   +  LL +  ++ SLT+WT KND Y  EDL ++R +   K+VF+D+   +    K+A
Sbjct:    9 GSWSENILEYFLRNSQITAEDGAEITWYHAANHKAQTNEAL-KSTAHMIEADVLLPSDGSEHSQPIMAHPPETNSDNTLQEWLTEVMKSN--KGIKLDFKSLAVVEPSMMLLENVKRHLKRP---VWINADILPGPNGN---SKVIDAKPFLDTVISFFPDVTFSLGWTTGWHPEKVNEGYSWTMVKEMEYIC--NELSQPVTFPVRAALVRQSCSQLLWLLKK-SNRYSLTIWTGKNDNYSVEDLLYIRDHFDKKQVFYDILEPQNHEFKQA 269

The following BLAST results are available for this feature:

BLAST of TCONS_00046305 vs. Swiss-Prot (Human)

BLAST of TCONS_00046305 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
F151B	1.340e-34	35.90	Protein FAM151B OS=Homo sapiens GN=FAM151B PE=1 SV...	[more]

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TCONS_00046305 (transcript) - C. hemisphaerica