TCONS_00046222 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046222
Unique NameTCONS_00046222
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length150

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046222 ID=TCONS_00046222|Name=TCONS_00046222|organism=Clytia hemisphaerica|type=transcript|length=150bp
ccgATTCTTCAGTCTTTGCTCAGACTGGGTTTTGTAAACTATTgtaataa
atttgattttgataacataatttataaattttataggtaattattttcaa
ttcgCTGTAAATAAGCATTCAATGCATAAACTCTTAAAACAAAAAGGGCG
Run BLAST on NCBI

transcript from alignment at scaffold_106:306890..307039

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046222 ID=TCONS_00046222|Name=TCONS_00046222|organism=Clytia hemisphaerica|type=transcript|length=150bp|location=Sequence derived from alignment at scaffold_106:306890..307039 (Clytia hemisphaerica)
CGCCCTTTTTGTTTTAAGAGTTTATGCATTGAATGCTTATTTACAGcgaa
ttgaaaataattacctataaaatttataaattatgttatcaaaatcaaat
ttattacAATAGTTTACAAAACCCAGTCTGAGCAAAGACTGAAGAATcgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029521XLOC_029521Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046222-exon-scaffold_106-1491911889:306890..307039TCONS_00046222-exon-scaffold_106-1491911889:306890..307039Clytia hemisphaericaexon
TCONS_00046222-exon-scaffold_106-1510915933:306890..307039TCONS_00046222-exon-scaffold_106-1510915933:306890..307039Clytia hemisphaericaexon
TCONS_00046222-exon-scaffold_106-1575043694:306890..307039TCONS_00046222-exon-scaffold_106-1575043694:306890..307039Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_106supercontigscaffold_106:306890..307039 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046222 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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