TCONS_00046201 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046201
Unique NameTCONS_00046201
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2506

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046201 ID=TCONS_00046201|Name=TCONS_00046201|organism=Clytia hemisphaerica|type=transcript|length=2506bp
tttaattttgagcTTCATTTTTTATGGTATCTTTTTCAACCTTTGGATTT
TCcatagaaaaaaaaacctttaattcAAATTAATGTATATTTTGTCTTTT
CcagtaaaaaatattaaaaaagtacCAAAAATGTTTGGTCGACTGCGATC
ATTGGGTTCAACCTCAAAAGTTATTGCAAACACTGTCAACAAGAGAAATA
CAAGTCAATATGTGAGCTCACGTCCATACACATTCAAATGGGGCATGCTT
CCTGTTACATTGGTTTCTGTCCCAATGATATATTTCGGTGCAATGGTTGC
TAAAAGTGGAGCAGAATTCTTGGAAGAATGGAATATCTTTGTCCCTGATG
ACGATGATGACTAAGCAGATTATTTCAATATTGGATCCAGTCATTCAAAT
CAAGATCACACTCTACGactttattaaatattttcacttgcctaagttat
ttgtttttcttataaataatgaataattgcctattttttacttttgattt
tattttgatttttagtttttttgtgtaGTGTGTATTATATTAGGGAGAAA
ATAACAATGCACCATATTGTAGCCATTTCCTGACTTGAATTCCCAGTACG
ACATTATTCTCAAAtcttattttctattttaggcCTTTTTGCTTTAGTTG
ATTCGTATGGATAATTTATTATACCGCCTTATCAAAAAATCTTGCCTTGA
ATTTCTTTCAATAagttattttatattataacaTTTATTCATTTTGGTTT
CAGAGCAAAAATGAATGACATAGTAAAAAATACAGAACTTTTCATCAGCA
TTATGGGTATGTCAAGGACATCATCCGTTCAAAAGTGGGATCATGAAGCT
TTCCAACGTGCTTTCAGATGGGCTCATTACTTTGAACaggTTTACAAGAA
AACAAGGTCGAAGCCCAATATCATGGAAAAGATTTCTAAGCAGCTTGATA
TGCTATGCAGTGAGGTGGATGTGAAGTGTGGCCTACAACCAATCCGGTAT
GAGGATCTACCACACGTCAGTCAAATCTTGCGCAAAAACCTCTTGGAAAA
CCCTCACTTGAATAGCGAATTCTATCTTGAATTAATCAGTCAGTTGAAAG
ACCCGCTACAACAGGAAGTGACTTACAAGAAACAGTTGCAAACATTGTCA
AAGTTGAAAGCTACTCTGCAGATTTTACAATTGATCCAAAAACGTTTTGA
ATCGAAACAAGAGAAGAAGGATGAAGAATTGAAAGAAGAGgaggatgaag
atgaagatgaatgtGTTGCTAGTGATTGTCTacatcaccatggcaataag
aAATCACAAATCACTGCAAACGCATCCCTTCTTAGAAAATGTCTACTCAA
TGTCATTGGATCAGATTATTCAGCAtttcaaagaaagaaatatCAACTTC
ACTCAAAACTAGACAGCATGTTGAAACACGAGTGTGGGTTGGATGTATTA
CTTTCAGCACTTTTAATTGAAGACAGTGaccaatttgaaaatgttacCAA
ATACATACTAGAATTTGTTGAAGATATTCTTGTACCGAAATGGAAGGTTA
ACTGGAAAGATTTCTTACAATTCCCATTATCCAACCTATATGGTCTGTGT
AGTGAGAAACATCCTGCATTTTGTGGTGCATATCTTGATACTTTGATTTT
GTGTGGAGATCGTATTCAAGAATTGCTCGTAAAGAATAACTATGTTCTTC
TACTTGGAAAGAGGGATAAGGATGCGAACGAACAATTGTgcaaatacttt
tttttcttgATGCAAAGTCACTTGTCAAAGTTTGCTCAAACTGACCCATC
CTTAGAAGTCAAATTGTGCTCGCTCATCCAAAACAAAATTCGTAACACAG
AAGAGATTCCTATTGATTCGAACGTGTGGAAACGACTTTCAGTGGAACTC
TAAAAGTAGAATCGAAAGGAGTATACCTTGTATACTCCTTGATATTTTAC
TGCTGTCTCTGCTATAAAGCGAggtaattttttataaaaatatatcgTGT
TTGTCTTTTACATTACGCAAAACGACCTTAAAATACCaattgcttgtttt
tctttaccaaaatttattttgtcccattttaaggataaatcttCACGTTG
TTCTTCTTTACAGAATTCAGCGAGAGACCAATTTGAGGTCTGGAGTAAAC
TTCCTTTTTCAGCTGTTTTAACACGGAAAGTTTCTTTTCAATGTTTAAGT
TTCTTAAAATGCTATTTTCTAAGAATTACACCTTTTAATTTCCTAATAAT
ATTGGGAATTGAAATTCATTTAACATGTATTTAACTGTCCATTTAGGGGT
ACTTCGagaaattttcgtcaaaatatctatgACTAATATTGATTTTTGGC
CAAAAGGATCATAAATTTCGGAAAAAAGCCTACGTAGTTATCATGTGATG
ATTTAATTCGATGAATAACGATAGACAAGGTGACTTCAATGCTCAATCAG
GTATAAAAAGTGACTACCGATTGTATTGTTTCTTCTCTCTGgccattaca
cgtttt
Run BLAST on NCBI

protein sequence of TCONS_00046201-protein

>TCONS_00046201-protein ID=TCONS_00046201-protein|Name=TCONS_00046201-protein|organism=Clytia hemisphaerica|type=polypeptide|length=380bp
MNDIVKNTELFISIMGMSRTSSVQKWDHEAFQRAFRWAHYFEQVYKKTRS
KPNIMEKISKQLDMLCSEVDVKCGLQPIRYEDLPHVSQILRKNLLENPHL
NSEFYLELISQLKDPLQQEVTYKKQLQTLSKLKATLQILQLIQKRFESKQ
EKKDEELKEEEDEDEDECVASDCLHHHGNKKSQITANASLLRKCLLNVIG
SDYSAFQRKKYQLHSKLDSMLKHECGLDVLLSALLIEDSDQFENVTKYIL
EFVEDILVPKWKVNWKDFLQFPLSNLYGLCSEKHPAFCGAYLDTLILCGD
RIQELLVKNNYVLLLGKRDKDANEQLCKYFFFLMQSHLSKFAQTDPSLEV
KLCSLIQNKIRNTEEIPIDSNVWKRLSVEL
Run BLAST on NCBI

transcript from alignment at scaffold_106:471711..477195-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046201 ID=TCONS_00046201|Name=TCONS_00046201|organism=Clytia hemisphaerica|type=transcript|length=5485bp|location=Sequence derived from alignment at scaffold_106:471711..477195- (Clytia hemisphaerica)
TTTAATTTTGAGCTTCATTTTTTATGGTATCTTTTTCAACCTTTGGATTT
TCCATAGAAAAAAAAACCTTTAATTCAAATTAATGTATATTTTGTCTTTT
CCAGTAAAAAATATTAAAAAAGTACCAAAAATGTTTGGTCGACTGCGATC
ATTGGGTTCAACCTCAAAAGTTATTGCAAACACTGTCAACAAGAGAAATA
CAAGTCAATATGTGAGCTCACGTCCATACACATTCAAATGGGGCATGCTT
CCTGTTACATTGGTTTCTGTCCCAATGATATATTTCGGTGCAATGGTTGC
TAAAAGTGGAGCAGAATTCTTGGAAGAATGGAATATCTTTGTCCCTGATG
ACGATGATGACTAAGCAGATTATTTCAATATTGGATCCAGTCATTCAAAT
CAAGATCACACTCTACGACTTTATTAAATATTTTCACTTGCCTAAGTTAT
TTGTTTTTCTTATAAATAATGAATAATTGCCTATTTTTTACTTTTGATTT
TATTTTGATTTTTAGTTTTTTTGTGTAGTGTGTATTATATTAGGGAGAAA
ATAACAATGCACCATATTGTAGCCATTTCCTGACTTGAATTCCCAGTACG
ACATTATTCTCAAATCTTATTTTCTATTTTAGGCCTTTTTGCTTTAGTTG
ATTCGTATGGATAATTTATTATACCGCCTTATCAAAAAATCTTGCCTTGA
ATTTCTTTCAATAAGTTATTTTATATTATAACATTTATTCATTTTGGTTT
CAGAGCAAAAATGAATGACATAGTAAAAAATACAGAACTTTTCATCAGCA
TTATGGGTATGTCAAGGACATCATCCGTTCAAAAGTGGGATCATGAAGCT
TTCCAACGTGCTTTCAGATGGGCTCATTACTTTGAACAGGTAAAAAACAT
TTTTTGTGCAAGCTTGATTCTTTTCTCTGTAGTTATGATAGCCCCTTTGG
ATACCACCCACCGAGACACCTGAATCCTGTGTCATTTTTTGGAGCCTGCA
AAGACAGAAACCTAAGAGTACAAAAAAAGAATTTTGTTCATTTGTCAAAT
ATCTTCTCCACGAACATTTTGAGAAAGGATGTGTTTTAAATATTGTCTTA
AAAAACTTTTTTTATAGGTTTACAAGAAAACAAGGTCGAAGCCCAATATC
ATGGAAAAGATTTCTAAGCAGCTTGATATGCTATGCAGTGAGGTGGATGT
GAAGTGTGGCCTACAACCAATCCGGTATGAGGATCTACCACACGTCAGTC
AAATCTTGCGCAAAAACCTCTTGGAAAACCCTCACTTGAATAGCGAATTC
TATCTTGAATTAATCAGTCAGTTGAAAGACCCGCTACAACAGGAAGTGAC
TTACAAGAAACAGTTGCAAACATTGTCAAAGTTGAAAGCTACTCTGCAGA
TTTTACAATTGATCCAAAAACGTTTTGAATCGAAACAAGAGAAGAAGGAT
GAAGAATTGAAAGAAGAGGAGGATGAAGATGAAGATGAATGTGTTGCTAG
TGATTGTCTACATCACCATGGCAATAAGAAATCACAAATCACTGCAAACG
CATCCCTTCTTAGAAAATGTCTACTCAATGTCATTGGATCAGGTATCCCT
CAAAATTTCCCCATTTTATGTTAAGCCTTACCACTTTATTCATAGTCTTT
AAAAGTACGGGTATGGCAAAAAAAGATAATACCAAAATTAGAATGAAACT
CAACATAAATTTCAAATAAAAAAAAGGTTTCAACACAATGATTGTTTTGA
TAGAATGGATTGATTTTTTTATGGTTCAACAGAAATTAAATTAAGGAGAC
TTAAAGCGGACATGTTTAAAGATGTGATTGTAGTAATATGAAACATGTTT
TAACCTGGGCTAATAATCTGAAAATTTTTGAAGAAGTTTCATACTTAATC
CACTTACATTTTATAAATTAAAACATTTTTTCGCTTTTCAGATTATTCAG
CATTTCAAAGAAAGAAATATCAACTTCACTCAAAACTAGACAGCATGTTG
AAACACGAGTGTGGGTTGGATGTATTACTTTCAGCACTTTTAATTGAAGA
CAGTGACCAATTTGAAAATGTTACCAAATACATACTAGAATTTGTTGAAG
GTTGGTAAATTTATTTTAAAGAAGAAAATTTGGTTTAAACTTTCATGGAG
TGAAGCAGCTTAATTGCTTTTCCCTGTTTGTTGTGACTTTTAGAACGCAT
TTGGTTTATTTTTTCAGTGGACTGAAACAAATATATATTATTGTAGGGAA
TTTTGAGCTAAGGAGGATACAATGGGTTTACACAAAGTATTAGTACTACA
ATTATGGTCGAAATATATTGAGATTTTAGTGTATTTTAACGTTTTTCAGA
ATTTAAAATTCGGGTGTGATTTGCTATTTTAGCACTTCCACTTTCTTTCA
TTGAATATTTCGAGTTTAGAGGGGTTCGGTGGCTATATTCCAAGCCTTAT
TGGAGCAAATTTGAGCTTTTAAATACTGAGATCCTAAGGTCCTAAGTATA
AAGTCTCATGTTAAAACTCTACTTTCAAACTGTAGTTTAAGGCGCTTGAA
AATCATTTGTGGTGTTTAAAATTTCGCCGTGATATCCCCTTTGTCTCAAA
TATTTTGTCCAATATTGTAGTAATCTAATGGTTATGAGGAAAACCCGGGA
TAAATTTCCCGAGGTCAATTTTTAAATTTTTTGAAATTTGGAAATTTGAC
CGAGGTTAATTTTATATCCAGAATTTCATAAAAATAAGCATGGGATTCCT
GGTTAATCTCATGGTTTGGATTGAAATTCTAACAATTCTGAAAGACGTCA
ATTTAACACTTGAAATCAATCTGAAATTTTAAAAGAGGTCTCAAAAAGTC
AAAAACGCGAATCGAGTTTTAATTGGATAGTATTCCATTTACTCAAGCCT
TCGAAGTTAATAAGAAATTCGAAAAAGGTGATGAATTTCCAAACGATAGA
AATTTCACTTTTGCGGGAAATTACAAAAGCTAAAAGGGAATACAAATTAT
CGTAAGCAAAAACGTCAATCGAATTTCAATCAACCATGAGATGGGAGGGA
AGGGAGCGCATCGAATAGTAGAGCGTCGTTTATGAGAGTTTCTTGTCGAT
GGGGACTTAGAGTATTAATGGAGTATCGAATAACAGAAAGTCGATTAAGA
GAGCGTCAACTGTAATTACAATTCTATCTGTAAAATTTTGTGTACTTTTT
AACCACTTATTTAAGAAAATGAAACATGCTTCCACTACAAATTTATAACA
ATAATATCAACTTAGGAAATACATGTTGAAAGTTAACCATAACCTTACTG
TTTTGTTATCTGTCATTCAGATATTCTTGTACCGAAATGNTTGAAAGTTA
ACCATAACCTTACTTTTTTGTTATCTGTCATTCAGATATTCTTGTACCGA
AATGGAAGGTTAACTGGAAAGATTTCTTACAATTCCCATTATCCAACCTA
TATGGTCTGTGTAGTGAGAAACATCCTGCATTTTGTGGTGCATATCTTGA
TACTTTGATTTTGTGTGGAGATCGTATTCAAGAATTGCTCGTAAAGAATA
ACTATGTTCTTCTACTTGGAAAGTGAGTAGACTAACCCCTTTTCTAAAAC
TCCTTAAATCAGCAATGTTTCTTGTAGTCTACATAATATACAGCTTCAGG
CTTTTAGTATTTACTCTTGGTCTATAGGCACTGCTATAAGCGGCCACTAG
TGGCCTCCACCGGAAATTTGCTTTTTAAAAGGATTATTTATCAATAAATA
GAGATTTCAAATAAAAGAATGTTTAAAACACAGCTGATTGGCTTAGGTTT
CGAAGCTCTCTATGTTTCATTAAAACCTCAGTGCGCATGCGATGTATCCG
GAAAAATTCAATATTCAAAACAAGAGCAGTGCGCATATCCCGAAGAGTAG
AAGGAGTTTTACGCTCGAAACGAAGGAAGATATGACGTAGCCTAGATTTC
TTGTCTTTTTTTCGCCTCAAATATTACCTTATTCTACTAACGTATTGGAA
AATGAAACAAAATTCCGTATTACTTCGAATAAACGCCCCCTTCTTTTAAA
CGCCCCCTCGAATAAACGCCCCTCCTAAAAGGAAAATTATTTGATAAACG
CCCCCTCAAATAAACGCCCCCTCAAATAAACGCCCCCTCAAATAAACGCC
CCCTTCGAATGAACGCCCCCTCCAGGGGAGGGGCGTTTATTAGAAACTTG
TGACTTTAATACTTCAATATCAGTGTTGATTGGGTTTGAAAAGGAAGATT
TTAGTCATTTCTTGTAACCAAAGCAGTTTTCGATGCAATTTCAATCGTTG
AACCAAAGAAATTTTTCACTTAAAAAATCCTGATAAAGAACTAAAAAAAG
GGTATATTTGCTCTAAATATTCGACTTTAGACTAAAATAATTCAGTAAAC
GCCCCCTTCTTTTAACCCCCCCCCCCCCCTCGAATAAACGCCCCTCCTAA
AATCGAAAAAAATAAATAAGCGCCCCGGGCGTTTATTCGAAGTAATACGG
TAGTTCTCTGCCCACTAAAAGAGTTTGGTAAACAAGAATAAGTTTTGACC
ACCCTCACTTCAGTTAAATCGGAAAACGGGAGCTTTTGAACAATGATCTT
AAGTTGGACCAAGACCTTTGACAGTTTTAGAATCCTAGAGTTTGTCTTGA
TAAAATATGATATTTTTTATTTTACTTTGATCTTTTCAGGAGGGATAAGG
ATGCGAACGAACAATTGTGCAAATACTTTTTTTTCTTGATGCAAAGTCAC
TTGTCAAAGTTTGCTCAAACTGACCCATCCTTAGAAGTCAAATTGTGCTC
GCTCATCCAAAACAAAATTCGTAACACAGAAGAGATTCCTATTGATTCGA
ACGTGTGGAAACGACTTTCAGTGGAACTCTAAAAGTAGAATCGAAAGGAG
TATACCTTGTATACTCCTTGATATTTTACTGCTGTCTCTGCTATAAAGCG
AGGTAATTTTTTATAAAAATATATCGTGTTTGTCTTTTACATTACGCAAA
ACGACCTTAAAATACCAATTGCTTGTTTTTCTTTACCAAAATTTATTTTG
TCCCATTTTAAGGATAAATCTTCACGTTGTTCTTCTTTACAGAATTCAGC
GAGAGACCAATTTGAGGTCTGGAGTAAACTTCCTTTTTCAGCTGTTTTAA
CACGGAAAGTTTCTTTTCAATGTTTAAGTTTCTTAAAATGCTATTTTCTA
AGAATTACACCTTTTAATTTCCTAATAATATTGGGAATTGAAATTCATTT
AACATGTATTTAACTGTCCATTTAGGGGTACTTCGAGAAATTTTCGTCAA
AATATCTATGACTAATATTGATTTTTGGCCAAAAGGATCATAAATTTCGG
AAAAAAGCCTACGTAGTTATCATGTGATGATTTAATTCGATGAATAACGA
TAGACAAGGTGACTTCAATGCTCAATCAGGTATAAAAAGTGACTACCGAT
TGTATTGTTTCTTCTCTCTGGCCATTACACGTTTT

Coding sequence (CDS) from alignment at scaffold_106:471711..477195-

>TCONS_00046201 ID=TCONS_00046201|Name=TCONS_00046201|organism=Clytia hemisphaerica|type=CDS|length=5715bp|location=Sequence derived from alignment at scaffold_106:471711..477195- (Clytia hemisphaerica)
GAGGGATAAGGATGCGAACGAACAATTGTGCAAATACTTTTTTTTCTTGA
TGCAAAGTCACTTGTCAAAGTTTGCTCAAACTGACCCATCCTTAGAAGTC
AAATTGTGCTCGCTCATCCAAAACAAAATTCGTAACACAGAAGAGATTCC
TATTGATTCGAACGTGTGGAAACGACTTTCAGTGGAACTCTAAATATTCT
TGTACCGAAATGGAAGGTTAACTGGAAAGATTTCTTACAATTCCCATTAT
CCAACCTATATGGTCTGTGTAGTGAGAAACATCCTGCATTTTGTGGTGCA
TATCTTGATACTTTGATTTTGTGTGGAGATCGTATTCAAGAATTGCTCGT
AAAGAATAACTATGTTCTTCTACTTGGAAAATTATTCAGCATTTCAAAGA
AAGAAATATCAACTTCACTCAAAACTAGACAGCATGTTGAAACACGAGTG
TGGGTTGGATGTATTACTTTCAGCACTTTTAATTGAAGACAGTGACCAAT
TTGAAAATGTTACCAAATACATACTAGAATTTGTTGAAGGTTTACAAGAA
AACAAGGTCGAAGCCCAATATCATGGAAAAGATTTCTAAGCAGCTTGATA
TGCTATGCAGTGAGGTGGATGTGAAGTGTGGCCTACAACCAATCCGGTAT
GAGGATCTACCACACGTCAGTCAAATCTTGCGCAAAAACCTCTTGGAAAA
CCCTCACTTGAATAGCGAATTCTATCTTGAATTAATCAGTCAGTTGAAAG
ACCCGCTACAACAGGAAGTGACTTACAAGAAACAGTTGCAAACATTGTCA
AAGTTGAAAGCTACTCTGCAGATTTTACAATTGATCCAAAAACGTTTTGA
ATCGAAACAAGAGAAGAAGGATGAAGAATTGAAAGAAGAGGAGGATGAAG
ATGAAGATGAATGTGTTGCTAGTGATTGTCTACATCACCATGGCAATAAG
AAATCACAAATCACTGCAAACGCATCCCTTCTTAGAAAATGTCTACTCAA
TGTCATTGGATCAGATGAATGACATAGTAAAAAATACAGAACTTTTCATC
AGCATTATGGGTATGTCAAGGACATCATCCGTTCAAAAGTGGGATCATGA
AGCTTTCCAACGTGCTTTCAGATGGGCTCATTACTTTGAACAGGAGGGAT
AAGGATGCGAACGAACAATTGTGCAAATACTTTTTTTTCTTGATGCAAAG
TCACTTGTCAAAGTTTGCTCAAACTGACCCATCCTTAGAAGTCAAATTGT
GCTCGCTCATCCAAAACAAAATTCGTAACACAGAAGAGATTCCTATTGAT
TCGAACGTGTGGAAACGACTTTCAGTGGAACTCTAAATATTCTTGTACCG
AAATGGAAGGTTAACTGGAAAGATTTCTTACAATTCCCATTATCCAACCT
ATATGGTCTGTGTAGTGAGAAACATCCTGCATTTTGTGGTGCATATCTTG
ATACTTTGATTTTGTGTGGAGATCGTATTCAAGAATTGCTCGTAAAGAAT
AACTATGTTCTTCTACTTGGAAAATTATTCAGCATTTCAAAGAAAGAAAT
ATCAACTTCACTCAAAACTAGACAGCATGTTGAAACACGAGTGTGGGTTG
GATGTATTACTTTCAGCACTTTTAATTGAAGACAGTGACCAATTTGAAAA
TGTTACCAAATACATACTAGAATTTGTTGAAGGTTTACAAGAAAACAAGG
TCGAAGCCCAATATCATGGAAAAGATTTCTAAGCAGCTTGATATGCTATG
CAGTGAGGTGGATGTGAAGTGTGGCCTACAACCAATCCGGTATGAGGATC
TACCACACGTCAGTCAAATCTTGCGCAAAAACCTCTTGGAAAACCCTCAC
TTGAATAGCGAATTCTATCTTGAATTAATCAGTCAGTTGAAAGACCCGCT
ACAACAGGAAGTGACTTACAAGAAACAGTTGCAAACATTGTCAAAGTTGA
AAGCTACTCTGCAGATTTTACAATTGATCCAAAAACGTTTTGAATCGAAA
CAAGAGAAGAAGGATGAAGAATTGAAAGAAGAGGAGGATGAAGATGAAGA
TGAATGTGTTGCTAGTGATTGTCTACATCACCATGGCAATAAGAAATCAC
AAATCACTGCAAACGCATCCCTTCTTAGAAAATGTCTACTCAATGTCATT
GGATCAGATGAATGACATAGTAAAAAATACAGAACTTTTCATCAGCATTA
TGGGTATGTCAAGGACATCATCCGTTCAAAAGTGGGATCATGAAGCTTTC
CAACGTGCTTTCAGATGGGCTCATTACTTTGAACAGGAGGGATAAGGATG
CGAACGAACAATTGTGCAAATACTTTTTTTTCTTGATGCAAAGTCACTTG
TCAAAGTTTGCTCAAACTGACCCATCCTTAGAAGTCAAATTGTGCTCGCT
CATCCAAAACAAAATTCGTAACACAGAAGAGATTCCTATTGATTCGAACG
TGTGGAAACGACTTTCAGTGGAACTCTAAATATTCTTGTACCGAAATGGA
AGGTTAACTGGAAAGATTTCTTACAATTCCCATTATCCAACCTATATGGT
CTGTGTAGTGAGAAACATCCTGCATTTTGTGGTGCATATCTTGATACTTT
GATTTTGTGTGGAGATCGTATTCAAGAATTGCTCGTAAAGAATAACTATG
TTCTTCTACTTGGAAAATTATTCAGCATTTCAAAGAAAGAAATATCAACT
TCACTCAAAACTAGACAGCATGTTGAAACACGAGTGTGGGTTGGATGTAT
TACTTTCAGCACTTTTAATTGAAGACAGTGACCAATTTGAAAATGTTACC
AAATACATACTAGAATTTGTTGAAGGTTTACAAGAAAACAAGGTCGAAGC
CCAATATCATGGAAAAGATTTCTAAGCAGCTTGATATGCTATGCAGTGAG
GTGGATGTGAAGTGTGGCCTACAACCAATCCGGTATGAGGATCTACCACA
CGTCAGTCAAATCTTGCGCAAAAACCTCTTGGAAAACCCTCACTTGAATA
GCGAATTCTATCTTGAATTAATCAGTCAGTTGAAAGACCCGCTACAACAG
GAAGTGACTTACAAGAAACAGTTGCAAACATTGTCAAAGTTGAAAGCTAC
TCTGCAGATTTTACAATTGATCCAAAAACGTTTTGAATCGAAACAAGAGA
AGAAGGATGAAGAATTGAAAGAAGAGGAGGATGAAGATGAAGATGAATGT
GTTGCTAGTGATTGTCTACATCACCATGGCAATAAGAAATCACAAATCAC
TGCAAACGCATCCCTTCTTAGAAAATGTCTACTCAATGTCATTGGATCAG
ATGAATGACATAGTAAAAAATACAGAACTTTTCATCAGCATTATGGGTAT
GTCAAGGACATCATCCGTTCAAAAGTGGGATCATGAAGCTTTCCAACGTG
CTTTCAGATGGGCTCATTACTTTGAACAGGAGGGATAAGGATGCGAACGA
ACAATTGTGCAAATACTTTTTTTTCTTGATGCAAAGTCACTTGTCAAAGT
TTGCTCAAACTGACCCATCCTTAGAAGTCAAATTGTGCTCGCTCATCCAA
AACAAAATTCGTAACACAGAAGAGATTCCTATTGATTCGAACGTGTGGAA
ACGACTTTCAGTGGAACTCTAAATATTCTTGTACCGAAATGGAAGGTTAA
CTGGAAAGATTTCTTACAATTCCCATTATCCAACCTATATGGTCTGTGTA
GTGAGAAACATCCTGCATTTTGTGGTGCATATCTTGATACTTTGATTTTG
TGTGGAGATCGTATTCAAGAATTGCTCGTAAAGAATAACTATGTTCTTCT
ACTTGGAAAATTATTCAGCATTTCAAAGAAAGAAATATCAACTTCACTCA
AAACTAGACAGCATGTTGAAACACGAGTGTGGGTTGGATGTATTACTTTC
AGCACTTTTAATTGAAGACAGTGACCAATTTGAAAATGTTACCAAATACA
TACTAGAATTTGTTGAAGGTTTACAAGAAAACAAGGTCGAAGCCCAATAT
CATGGAAAAGATTTCTAAGCAGCTTGATATGCTATGCAGTGAGGTGGATG
TGAAGTGTGGCCTACAACCAATCCGGTATGAGGATCTACCACACGTCAGT
CAAATCTTGCGCAAAAACCTCTTGGAAAACCCTCACTTGAATAGCGAATT
CTATCTTGAATTAATCAGTCAGTTGAAAGACCCGCTACAACAGGAAGTGA
CTTACAAGAAACAGTTGCAAACATTGTCAAAGTTGAAAGCTACTCTGCAG
ATTTTACAATTGATCCAAAAACGTTTTGAATCGAAACAAGAGAAGAAGGA
TGAAGAATTGAAAGAAGAGGAGGATGAAGATGAAGATGAATGTGTTGCTA
GTGATTGTCTACATCACCATGGCAATAAGAAATCACAAATCACTGCAAAC
GCATCCCTTCTTAGAAAATGTCTACTCAATGTCATTGGATCAGATGAATG
ACATAGTAAAAAATACAGAACTTTTCATCAGCATTATGGGTATGTCAAGG
ACATCATCCGTTCAAAAGTGGGATCATGAAGCTTTCCAACGTGCTTTCAG
ATGGGCTCATTACTTTGAACAGGAGGGATAAGGATGCGAACGAACAATTG
TGCAAATACTTTTTTTTCTTGATGCAAAGTCACTTGTCAAAGTTTGCTCA
AACTGACCCATCCTTAGAAGTCAAATTGTGCTCGCTCATCCAAAACAAAA
TTCGTAACACAGAAGAGATTCCTATTGATTCGAACGTGTGGAAACGACTT
TCAGTGGAACTCTAAATATTCTTGTACCGAAATGGAAGGTTAACTGGAAA
GATTTCTTACAATTCCCATTATCCAACCTATATGGTCTGTGTAGTGAGAA
ACATCCTGCATTTTGTGGTGCATATCTTGATACTTTGATTTTGTGTGGAG
ATCGTATTCAAGAATTGCTCGTAAAGAATAACTATGTTCTTCTACTTGGA
AAATTATTCAGCATTTCAAAGAAAGAAATATCAACTTCACTCAAAACTAG
ACAGCATGTTGAAACACGAGTGTGGGTTGGATGTATTACTTTCAGCACTT
TTAATTGAAGACAGTGACCAATTTGAAAATGTTACCAAATACATACTAGA
ATTTGTTGAAGGTTTACAAGAAAACAAGGTCGAAGCCCAATATCATGGAA
AAGATTTCTAAGCAGCTTGATATGCTATGCAGTGAGGTGGATGTGAAGTG
TGGCCTACAACCAATCCGGTATGAGGATCTACCACACGTCAGTCAAATCT
TGCGCAAAAACCTCTTGGAAAACCCTCACTTGAATAGCGAATTCTATCTT
GAATTAATCAGTCAGTTGAAAGACCCGCTACAACAGGAAGTGACTTACAA
GAAACAGTTGCAAACATTGTCAAAGTTGAAAGCTACTCTGCAGATTTTAC
AATTGATCCAAAAACGTTTTGAATCGAAACAAGAGAAGAAGGATGAAGAA
TTGAAAGAAGAGGAGGATGAAGATGAAGATGAATGTGTTGCTAGTGATTG
TCTACATCACCATGGCAATAAGAAATCACAAATCACTGCAAACGCATCCC
TTCTTAGAAAATGTCTACTCAATGTCATTGGATCAGATGAATGACATAGT
AAAAAATACAGAACTTTTCATCAGCATTATGGGTATGTCAAGGACATCAT
CCGTTCAAAAGTGGGATCATGAAGCTTTCCAACGTGCTTTCAGATGGGCT
CATTACTTTGAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029501XLOC_029501Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046201-exon-scaffold_106-1575043694:476307..477195TCONS_00046201-exon-scaffold_106-1575043694:476307..477195Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1575043694:475604..476078TCONS_00046201-exon-scaffold_106-1575043694:475604..476078Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1575043694:475096..475254TCONS_00046201-exon-scaffold_106-1575043694:475096..475254Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1575043694:473624..473810TCONS_00046201-exon-scaffold_106-1575043694:473624..473810Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1575043694:471711..472506TCONS_00046201-exon-scaffold_106-1575043694:471711..472506Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1510915933:476307..477195TCONS_00046201-exon-scaffold_106-1510915933:476307..477195Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1510915933:475604..476078TCONS_00046201-exon-scaffold_106-1510915933:475604..476078Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1510915933:475096..475254TCONS_00046201-exon-scaffold_106-1510915933:475096..475254Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1510915933:473624..473810TCONS_00046201-exon-scaffold_106-1510915933:473624..473810Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1510915933:471711..472506TCONS_00046201-exon-scaffold_106-1510915933:471711..472506Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1491911889:476307..477195TCONS_00046201-exon-scaffold_106-1491911889:476307..477195Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1491911889:475604..476078TCONS_00046201-exon-scaffold_106-1491911889:475604..476078Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1491911889:475096..475254TCONS_00046201-exon-scaffold_106-1491911889:475096..475254Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1491911889:473624..473810TCONS_00046201-exon-scaffold_106-1491911889:473624..473810Clytia hemisphaericaexon
TCONS_00046201-exon-scaffold_106-1491911889:471711..472506TCONS_00046201-exon-scaffold_106-1491911889:471711..472506Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046201-proteinTCONS_00046201-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_106supercontigscaffold_106:471711..477195 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
74.5388	74.7354	98.999	107.719	43.7613	35.0087	43.5669	46.7171	55.3285	46.9947	51.3727	53.541	43.488	41.7195	39.2411	37.2386	33.4507	42.6731	40.9153	36.1374	38.4189	35.3531	58.2544	53.9794	32.7162	35.7666	27.765	30.0926	27.1355	27.8816
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR025825FANCF
Vocabulary: Cellular Component
TermDefinition
GO:0043240Fanconi anaemia nuclear complex
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0043240 Fanconi anaemia nuclear complex
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046201 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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