XLOC_029501 (gene) - C. hemisphaerica

Overview
NameXLOC_029501
Unique NameXLOC_029501
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_106:471711..477195-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029501 ID=XLOC_029501|Name=XLOC_029501|organism=Clytia hemisphaerica|type=gene|length=5485bp|location=Sequence derived from alignment at scaffold_106:471711..477195- (Clytia hemisphaerica)
TTTAATTTTGAGCTTCATTTTTTATGGTATCTTTTTCAACCTTTGGATTT
TCCATAGAAAAAAAAACCTTTAATTCAAATTAATGTATATTTTGTCTTTT
CCAGTAAAAAATATTAAAAAAGTACCAAAAATGTTTGGTCGACTGCGATC
ATTGGGTTCAACCTCAAAAGTTATTGCAAACACTGTCAACAAGAGAAATA
CAAGTCAATATGTGAGCTCACGTCCATACACATTCAAATGGGGCATGCTT
CCTGTTACATTGGTTTCTGTCCCAATGATATATTTCGGTGCAATGGTTGC
TAAAAGTGGAGCAGAATTCTTGGAAGAATGGAATATCTTTGTCCCTGATG
ACGATGATGACTAAGCAGATTATTTCAATATTGGATCCAGTCATTCAAAT
CAAGATCACACTCTACGACTTTATTAAATATTTTCACTTGCCTAAGTTAT
TTGTTTTTCTTATAAATAATGAATAATTGCCTATTTTTTACTTTTGATTT
TATTTTGATTTTTAGTTTTTTTGTGTAGTGTGTATTATATTAGGGAGAAA
ATAACAATGCACCATATTGTAGCCATTTCCTGACTTGAATTCCCAGTACG
ACATTATTCTCAAATCTTATTTTCTATTTTAGGCCTTTTTGCTTTAGTTG
ATTCGTATGGATAATTTATTATACCGCCTTATCAAAAAATCTTGCCTTGA
ATTTCTTTCAATAAGTTATTTTATATTATAACATTTATTCATTTTGGTTT
CAGAGCAAAAATGAATGACATAGTAAAAAATACAGAACTTTTCATCAGCA
TTATGGGTATGTCAAGGACATCATCCGTTCAAAAGTGGGATCATGAAGCT
TTCCAACGTGCTTTCAGATGGGCTCATTACTTTGAACAGGTAAAAAACAT
TTTTTGTGCAAGCTTGATTCTTTTCTCTGTAGTTATGATAGCCCCTTTGG
ATACCACCCACCGAGACACCTGAATCCTGTGTCATTTTTTGGAGCCTGCA
AAGACAGAAACCTAAGAGTACAAAAAAAGAATTTTGTTCATTTGTCAAAT
ATCTTCTCCACGAACATTTTGAGAAAGGATGTGTTTTAAATATTGTCTTA
AAAAACTTTTTTTATAGGTTTACAAGAAAACAAGGTCGAAGCCCAATATC
ATGGAAAAGATTTCTAAGCAGCTTGATATGCTATGCAGTGAGGTGGATGT
GAAGTGTGGCCTACAACCAATCCGGTATGAGGATCTACCACACGTCAGTC
AAATCTTGCGCAAAAACCTCTTGGAAAACCCTCACTTGAATAGCGAATTC
TATCTTGAATTAATCAGTCAGTTGAAAGACCCGCTACAACAGGAAGTGAC
TTACAAGAAACAGTTGCAAACATTGTCAAAGTTGAAAGCTACTCTGCAGA
TTTTACAATTGATCCAAAAACGTTTTGAATCGAAACAAGAGAAGAAGGAT
GAAGAATTGAAAGAAGAGGAGGATGAAGATGAAGATGAATGTGTTGCTAG
TGATTGTCTACATCACCATGGCAATAAGAAATCACAAATCACTGCAAACG
CATCCCTTCTTAGAAAATGTCTACTCAATGTCATTGGATCAGGTATCCCT
CAAAATTTCCCCATTTTATGTTAAGCCTTACCACTTTATTCATAGTCTTT
AAAAGTACGGGTATGGCAAAAAAAGATAATACCAAAATTAGAATGAAACT
CAACATAAATTTCAAATAAAAAAAAGGTTTCAACACAATGATTGTTTTGA
TAGAATGGATTGATTTTTTTATGGTTCAACAGAAATTAAATTAAGGAGAC
TTAAAGCGGACATGTTTAAAGATGTGATTGTAGTAATATGAAACATGTTT
TAACCTGGGCTAATAATCTGAAAATTTTTGAAGAAGTTTCATACTTAATC
CACTTACATTTTATAAATTAAAACATTTTTTCGCTTTTCAGATTATTCAG
CATTTCAAAGAAAGAAATATCAACTTCACTCAAAACTAGACAGCATGTTG
AAACACGAGTGTGGGTTGGATGTATTACTTTCAGCACTTTTAATTGAAGA
CAGTGACCAATTTGAAAATGTTACCAAATACATACTAGAATTTGTTGAAG
GTTGGTAAATTTATTTTAAAGAAGAAAATTTGGTTTAAACTTTCATGGAG
TGAAGCAGCTTAATTGCTTTTCCCTGTTTGTTGTGACTTTTAGAACGCAT
TTGGTTTATTTTTTCAGTGGACTGAAACAAATATATATTATTGTAGGGAA
TTTTGAGCTAAGGAGGATACAATGGGTTTACACAAAGTATTAGTACTACA
ATTATGGTCGAAATATATTGAGATTTTAGTGTATTTTAACGTTTTTCAGA
ATTTAAAATTCGGGTGTGATTTGCTATTTTAGCACTTCCACTTTCTTTCA
TTGAATATTTCGAGTTTAGAGGGGTTCGGTGGCTATATTCCAAGCCTTAT
TGGAGCAAATTTGAGCTTTTAAATACTGAGATCCTAAGGTCCTAAGTATA
AAGTCTCATGTTAAAACTCTACTTTCAAACTGTAGTTTAAGGCGCTTGAA
AATCATTTGTGGTGTTTAAAATTTCGCCGTGATATCCCCTTTGTCTCAAA
TATTTTGTCCAATATTGTAGTAATCTAATGGTTATGAGGAAAACCCGGGA
TAAATTTCCCGAGGTCAATTTTTAAATTTTTTGAAATTTGGAAATTTGAC
CGAGGTTAATTTTATATCCAGAATTTCATAAAAATAAGCATGGGATTCCT
GGTTAATCTCATGGTTTGGATTGAAATTCTAACAATTCTGAAAGACGTCA
ATTTAACACTTGAAATCAATCTGAAATTTTAAAAGAGGTCTCAAAAAGTC
AAAAACGCGAATCGAGTTTTAATTGGATAGTATTCCATTTACTCAAGCCT
TCGAAGTTAATAAGAAATTCGAAAAAGGTGATGAATTTCCAAACGATAGA
AATTTCACTTTTGCGGGAAATTACAAAAGCTAAAAGGGAATACAAATTAT
CGTAAGCAAAAACGTCAATCGAATTTCAATCAACCATGAGATGGGAGGGA
AGGGAGCGCATCGAATAGTAGAGCGTCGTTTATGAGAGTTTCTTGTCGAT
GGGGACTTAGAGTATTAATGGAGTATCGAATAACAGAAAGTCGATTAAGA
GAGCGTCAACTGTAATTACAATTCTATCTGTAAAATTTTGTGTACTTTTT
AACCACTTATTTAAGAAAATGAAACATGCTTCCACTACAAATTTATAACA
ATAATATCAACTTAGGAAATACATGTTGAAAGTTAACCATAACCTTACTG
TTTTGTTATCTGTCATTCAGATATTCTTGTACCGAAATGNTTGAAAGTTA
ACCATAACCTTACTTTTTTGTTATCTGTCATTCAGATATTCTTGTACCGA
AATGGAAGGTTAACTGGAAAGATTTCTTACAATTCCCATTATCCAACCTA
TATGGTCTGTGTAGTGAGAAACATCCTGCATTTTGTGGTGCATATCTTGA
TACTTTGATTTTGTGTGGAGATCGTATTCAAGAATTGCTCGTAAAGAATA
ACTATGTTCTTCTACTTGGAAAGTGAGTAGACTAACCCCTTTTCTAAAAC
TCCTTAAATCAGCAATGTTTCTTGTAGTCTACATAATATACAGCTTCAGG
CTTTTAGTATTTACTCTTGGTCTATAGGCACTGCTATAAGCGGCCACTAG
TGGCCTCCACCGGAAATTTGCTTTTTAAAAGGATTATTTATCAATAAATA
GAGATTTCAAATAAAAGAATGTTTAAAACACAGCTGATTGGCTTAGGTTT
CGAAGCTCTCTATGTTTCATTAAAACCTCAGTGCGCATGCGATGTATCCG
GAAAAATTCAATATTCAAAACAAGAGCAGTGCGCATATCCCGAAGAGTAG
AAGGAGTTTTACGCTCGAAACGAAGGAAGATATGACGTAGCCTAGATTTC
TTGTCTTTTTTTCGCCTCAAATATTACCTTATTCTACTAACGTATTGGAA
AATGAAACAAAATTCCGTATTACTTCGAATAAACGCCCCCTTCTTTTAAA
CGCCCCCTCGAATAAACGCCCCTCCTAAAAGGAAAATTATTTGATAAACG
CCCCCTCAAATAAACGCCCCCTCAAATAAACGCCCCCTCAAATAAACGCC
CCCTTCGAATGAACGCCCCCTCCAGGGGAGGGGCGTTTATTAGAAACTTG
TGACTTTAATACTTCAATATCAGTGTTGATTGGGTTTGAAAAGGAAGATT
TTAGTCATTTCTTGTAACCAAAGCAGTTTTCGATGCAATTTCAATCGTTG
AACCAAAGAAATTTTTCACTTAAAAAATCCTGATAAAGAACTAAAAAAAG
GGTATATTTGCTCTAAATATTCGACTTTAGACTAAAATAATTCAGTAAAC
GCCCCCTTCTTTTAACCCCCCCCCCCCCCTCGAATAAACGCCCCTCCTAA
AATCGAAAAAAATAAATAAGCGCCCCGGGCGTTTATTCGAAGTAATACGG
TAGTTCTCTGCCCACTAAAAGAGTTTGGTAAACAAGAATAAGTTTTGACC
ACCCTCACTTCAGTTAAATCGGAAAACGGGAGCTTTTGAACAATGATCTT
AAGTTGGACCAAGACCTTTGACAGTTTTAGAATCCTAGAGTTTGTCTTGA
TAAAATATGATATTTTTTATTTTACTTTGATCTTTTCAGGAGGGATAAGG
ATGCGAACGAACAATTGTGCAAATACTTTTTTTTCTTGATGCAAAGTCAC
TTGTCAAAGTTTGCTCAAACTGACCCATCCTTAGAAGTCAAATTGTGCTC
GCTCATCCAAAACAAAATTCGTAACACAGAAGAGATTCCTATTGATTCGA
ACGTGTGGAAACGACTTTCAGTGGAACTCTAAAAGTAGAATCGAAAGGAG
TATACCTTGTATACTCCTTGATATTTTACTGCTGTCTCTGCTATAAAGCG
AGGTAATTTTTTATAAAAATATATCGTGTTTGTCTTTTACATTACGCAAA
ACGACCTTAAAATACCAATTGCTTGTTTTTCTTTACCAAAATTTATTTTG
TCCCATTTTAAGGATAAATCTTCACGTTGTTCTTCTTTACAGAATTCAGC
GAGAGACCAATTTGAGGTCTGGAGTAAACTTCCTTTTTCAGCTGTTTTAA
CACGGAAAGTTTCTTTTCAATGTTTAAGTTTCTTAAAATGCTATTTTCTA
AGAATTACACCTTTTAATTTCCTAATAATATTGGGAATTGAAATTCATTT
AACATGTATTTAACTGTCCATTTAGGGGTACTTCGAGAAATTTTCGTCAA
AATATCTATGACTAATATTGATTTTTGGCCAAAAGGATCATAAATTTCGG
AAAAAAGCCTACGTAGTTATCATGTGATGATTTAATTCGATGAATAACGA
TAGACAAGGTGACTTCAATGCTCAATCAGGTATAAAAAGTGACTACCGAT
TGTATTGTTTCTTCTCTCTGGCCATTACACGTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046202TCONS_00046202Clytia hemisphaericatranscript
TCONS_00046201TCONS_00046201Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046201-proteinTCONS_00046201-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_106supercontigscaffold_106:471711..477195 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
74.54	74.74	99	107.72	43.76	35.01	43.57	46.72	55.33	46.99	51.37	53.54	76.75	95.81	70.49	63.17	33.45	57.42	80.87	47.37	42.86	40.73	75.07	66.3	65.25	69.61	27.77	38.96	33.69	40.05