TCONS_00046170 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046170
Unique NameTCONS_00046170
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3416

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046170 ID=TCONS_00046170|Name=TCONS_00046170|organism=Clytia hemisphaerica|type=transcript|length=3416bp
gaaaaaaactaagaatgcacaaagaaaaaagaaaaataagcgaAACGACG
GTTTCCCCAAGAAGCACTTCGTTTGAATGCAGTAATTGTTCAAAAAATGA
GGCTCAAAGCAGATGTTCAAGATGTACGGCCGTCAAATATTGCTCCAAAG
AGTGTCAAAAAGATCATTGGGTGAAACATAAAGTACTTTGCAAGGATATC
AAGAAGAAAATGATATTATTAGAAAAGGAGGCAGCGCCGCTACGAAATTT
CTTCAATAAAAACTTATTCAAAGAGGAGGTTGGTAACTTTATGAGAATAG
AACAGACCCAGCTCTATTGTCAGCAACGTTTTGAACTAGCAACAGCTTTT
CATGTATGTGGTATGAAAAACAATTCGCGATTAGCTTTAGAATTGGCTGT
GGAACATTTATTGGATATCTTGTTTTTAAACCGAGGTGATTATTTAGGCG
TTCGTGCCCATATCCCTTCAATGCTGTTCATGCTTGATGAGCCTGAAGAA
GCTTACGATTTCTTAAAATGGTGGCAAGTTTCACATCAAGAGCGTTATGA
TTACTACAATCTTGATCTTCCTTATTGTAACTTGAAGGGTGAAGATATCT
TCGAGGATATGTCGAAATTACACCTCGGGAAAACACATCCTCAATGGCTA
GTTTCAATGTATATGGTGAAATACAAGATGTNAAAAACGCATCCTCAATG
GCTAGTGTCAATGTATATGGTGAAATACAAGATGTTCCAGAAAATCGAGA
AAGACAAGATTTCCTATGAGTCATTTCTCCTTGGAACACACCCTAGAGTT
GGTGAAGATTCACCCATCCAGCAAATCGGTGGAGTTTCGGTCATCTTACA
CAACATCAAGAAATGTTTCTCTCCAATTGATAAATATGAAACTATCAGGA
ATCAAACGattcaaattttaaagtttaTCGATTCCAAAAACAAATACATC
ATTCCTGGGTTTCTGAATTATAAAGTGCTCCTTGAACAGCCAAACCCACT
GTATGTTGGGGAAGGAGGGAGCCTTCAAGACCAAGCTTATGGTGCTGTTT
GGTTTGATATTAAACATTGGGAACCCGTACCTGATATCTTCATCCTCACC
AAAGAGCTTTACATTCAAATACATGGAAAAGTGAAAGCTGAACGCGACAT
AGCTGAACTACCGAGAGAAAAAGTATCACTTGCCAAAGTGCTAGGCAAAG
CACACCTAGCTTGAAAGTAGTTTCCATATCATTCAAAGACACAACATTAC
TGAATACGCTTGATTGCTTTTGTAGCGGCAATTTAAGAGGGGTATATGTT
TGACGTGAACCACTCCCAATAAAGTGCGGGATACCAAAAATATTGCCACT
TTAAACTTTTGACCTTAAAACCTCGAGGAGTGCTTACTATTCAAGCCAAA
CGAAAAGACGATGTATTTCTCGGTGACTTTACAATGTATTTGGTGGACAT
GGTTTAATTCGTTACGATTAGCATTATCTTCTTACTATTTTTATATTGTA
TTTTTATGTCATTCACTTCGTTCATTTAtacattttcctttaaaaacgAA
ATCTTTCTGCTTTATTTACACCGAAGTCGAATTCGAGgaagtaaatgaaa
aaaatcgaaCGAATCGACTTTACAGTTTAGTGTTATGCAAATTTACCGTG
TTTGTTTCGTTTTAGAGTTAGTAAAAATAATAAGATGGAGCCAAGAATCG
TCAGTGAAACAACAGTATCTCCAAGAAGCACTTCATTTGAATGCAGTAAC
TGTTCGAAAGATGATGCCGAACAAAGATGTTCAAGATGTACGGCCGTCAA
ATATTGCTCCAAAGAATGTCAAAAAGATCATTGGGTGAAACATAAAGCTT
ACTGCAATGAGATCAAGAAGTTATTAAAGAAAGTGGCTCTTGAAAGAGAA
CCATTGAGACGATATGAGGATTGGTTTGGAAACGAACCTTATGATTTGTT
TCCAGATGATGTCGGTCATTTCTGGAGTTTAGTCGAGCCACGAAACTATT
GTCGAGCACGACATGCTTTATCCATGCGTTTGCACGAGTGTGggataaaa
aataattcaaaattggCTTTAGAACTTTGCGTGGAACATTTGTTAGACTT
GGTTTGGTTGAGTCGAGGCGATAACCTTGGGGTACGTTCGCTTATCCCAG
GAATTTTATGCGTTTTGGGTGAAGTGCAAGAAGCTTACGATTTCTTGAAA
TGGTGGAAAGTTTGTGATCCTGATGGGCGCTATGATTGGGGGAACCTGGA
CCTCCCTTACTGTAATTTAAAAGATGAagatatttttgaagatttgtcGC
TTTTATGTCTTCATAAATACACAGATGCTTTCTCCTTGGTTTCGCTATTC
TTGATTAAATACAAAGTTATGAATCAGCTAGAGAAGGAGAAATTTTCCTA
TGAGACTTTTCTCCTTGGTACACATTCAAGACTTGGAGAAGAATCTCCAG
TCCGCAAGATCAGTGGAGTATCTGTTGTCTTACAGAATATCAAACACCTT
ATAGCACCTGGTAGttacaaaaaaatcaacattttgaaACAACATTTGGA
AGAATTAGCGAAACGAATTGATGAAGGAAATAAATTTGCGATTCCTGGAC
TGTTGAATTCAGCAGATCTTCTAGCTCACCCTCAGCCTCAATACACTTCA
CCTGGCACTCAGAATGAAGCTCATTCGATCACAATTTGTGAGATAGATCA
TTGGCTAGCTACCCCTGGCATTCATTCGTATTTGAAAGATTTATACATCG
GTCTACATGGTAAAAAGAAAGCTGAAAAAAACATTGCAGAAATCCCTAAT
GAGAAAGCCATGCTAACCATAGATGGCAGCGATGTTTATCATATGGACCA
AGCAAAAATCATGTAACTTGTTCGTTCTTAACAGACCATTGTGTATAGTt
cttttaattttggttttttgTGTTGTCTAAAGTGAATAGTTGGAGCCTCT
GAACCTTTTTGTGACAGTTACTCACAAACCACAACGTTCAACGTCGTTGA
ACATTCGTCTGGCGATGTAACTACATAGACGTTAAATGATCATTAAATGG
ACTTTAAATGAAATGGACTTTATTCGGACGTTTTGTCCCAAGGGTGAATG
TtatatacggaagcacccaaaaaagatCTGGTCTTTTTCACTAGTTTTAA
ATTCAAACAATAAAGTTACTGGCAAATGCCTGGACTATTTTGAGTGCCTT
gtatataaaacattacgtcatcaaTATCCAGTTTTggtgtgtttaaaatt
tcgaacCAAACTAAGAGGTTAGTTAGTGTTATTCAAGATAACATTGTGTA
GCACTAATTTCTTGTCGTCGTGTTCAAATATCATGTTTCATGTTTGTCTT
TTGTTCTGTTTTTtcgctttttcaatttttgaagcattttttcgtaaaaa
aaagtcaaagaCTTTG
Run BLAST on NCBI

protein sequence of TCONS_00046170-protein

>TCONS_00046170-protein ID=TCONS_00046170-protein|Name=TCONS_00046170-protein|organism=Clytia hemisphaerica|type=polypeptide|length=403bp
KKLRMHKEKRKISETTVSPRSTSFECSNCSKNEAQSRCSRCTAVKYCSKE
CQKDHWVKHKVLCKDIKKKMILLEKEAAPLRNFFNKNLFKEEVGNFMRIE
QTQLYCQQRFELATAFHVCGMKNNSRLALELAVEHLLDILFLNRGDYLGV
RAHIPSMLFMLDEPEEAYDFLKWWQVSHQERYDYYNLDLPYCNLKGEDIF
EDMSKLHLGKTHPQWLVSMYMVKYKMXKTHPQWLVSMYMVKYKMFQKIEK
DKISYESFLLGTHPRVGEDSPIQQIGGVSVILHNIKKCFSPIDKYETIRN
QTIQILKFIDSKNKYIIPGFLNYKVLLEQPNPLYVGEGGSLQDQAYGAVW
FDIKHWEPVPDIFILTKELYIQIHGKVKAERDIAELPREKVSLAKVLGKA
HLA
Run BLAST on NCBI

transcript from alignment at scaffold_106:297010..302450-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046170 ID=TCONS_00046170|Name=TCONS_00046170|organism=Clytia hemisphaerica|type=transcript|length=5441bp|location=Sequence derived from alignment at scaffold_106:297010..302450- (Clytia hemisphaerica)
GAAAAAAACTAAGAATGCACAAAGAAAAAAGAAAAATAAGCGAAACGACG GTTTCCCCAAGAAGCACTTCGTTTGAATGCAGTAATTGTTCAAAAAATGA GGCTCAAAGCAGATGTTCAAGATGTACGGCCGTCAAATATTGCTCCAAAG AGTGTCAAAAAGATCATTGGGTGAAACATAAAGTACTTTGCAAGGATATC AAGAAGAAAATGATATTATTAGAAAAGGAGGCAGCGCCGCTACGAAATTT CTTCAATAAAAACTTATTCAAAGAGGAGGTTGGTAACTTTATGAGAATAG AACAGACCCAGCTCTATTGTCAGCAACGTTTTGAACTAGCAACAGCTTTT CATGTATGTGGTATGAAAAACAATTCGCGATTAGCTTTAGAATTGGCTGT GGAACATTTATTGGATATCTTGTTTTTAAACCGAGGTGATTATTTAGGCG TTCGTGCCCATATCCCTTCAATGCTGTTCATGCTTGATGAGCCTGAAGAA GCTTACGATTTCTTAAAATGGTGGCAAGTTTCACATCAAGAGCGTTATGA TTACTACAATCTTGATCTTCCTTATTGTAACTTGAAGGGTGAAGATATCT TCGAGGATATGTCGAAATTACACCTCGGGAAAACACATCCTCAATGGCTA GTTTCAATGTATATGGTGAAATACAAGATGTNAAAAACGCATCCTCAATG GCTAGTGTCAATGTATATGGTGAAATACAAGATGTTCCAGAAAATCGAGA AAGACAAGATTTCCTATGAGTCATTTCTCCTTGGAACACATCCTAGAGTT GGTGAAGATTCTCCCATCCAGCAAATCGGTGGAGTTTCGGTCATCCTACA CAACATCAAGAAATGTTTCTCTCCTATTGATAAATATGACACTGTTAGGA ATCAAATGCTTGACATTTTAAAACTGATTGATATGATGAATCGAAACATC ATTCCTGGGCTGTTGAATTCTGATACGCTTCTTCGACAACCAAACCCTTT TTATGATGGGCGAGGAACTCAGCAAGATCAAGCTTATGCCGCTGTTTATT TTGATGCTCAACATTGGAAAGCCACTCCTAACATCTTTATTGTCACTAAA GAGCTTTACGCTCAAATACATGGATCGGCGTTGGCGGAATATAATATCAC TGAGTTACCTAAAGAAAGTGTATCACCGGCTAGATATCATATCCCAATGC CCTACTAGTCTTTTTTGACTGTTTGCTCTCATTTTTATAAAGGTTTTCTT ATCACCAACAAAGGCTGTTCAAGCAAAGTGTTTCTCCGATGACTTTCATT GACTTTAGTAACCAATGCCATCTAACAACATTTTTCGACCTTTTGATAAT ATCCATACAAGGATCGGACGAGCATTTCCAAAGGGTATTATGCAAGACGA ATTTTCGCTTTCCCAGGGAGTTTGTATTGGTCAAAGTTGGTCTTTTTCCG AGGGGTTAAATTATCGAGACAAGTTTATCTACGATAAGTCCTTTAGTTTT TCGAGGGGATGAAGACATTTTCATTTTCCAGGGAGCTAGATATAATTTTT TCCAGGGGGTTAGTATTCAGATTTTAAGGTACAGGATTTTATGATCCATT CCTTCTGTTACAATTACTTTTTTTTCTATTTTCATATTTTATTTTTAGTG CTATATTCATATTCATTTGTAACTTTCCTTTTAAAAACGAAAACATTGTT TTATAAACTTGAAATTAAAATCTGGCGTAAAAACGAATAAAAGTCGACAG ACCAATCTAACACTCATTCAAATAATACCTTAAGGGAAGGTAGTTGACGG GAAGAAAATGTTTTGGATTTGACCAAAGTCCGTCAGTTTAATTTCCCGCC AAATTCAGTTTTTCCCACTATCGGGAAAATTTAGTTAAATTCTCGTGAAA TTTTAGAGATTGTATTGACTCGAGTTTCCGCCAAAATTGTGTTCAAAGTT GCTTTATAAACTTTGTATTTCGTCCTTTTTTTGTTTCACCAGACCAAAAA TAAAATGAAGCCAAGAATTAAAGTATCACCAAGAAGTACTACATTCAAAT GCAGTAATTGTTCAAAAGATGATGCTCAAAATAGATGTTCAAGATGTACG GCTGTCAGATATTGCTCCAAAGAATGTCAAAAAGCTCATTGGGACTGGCA TAAAGTCGCTTGTAAACATATCAGAAAGAAAATAGTGTCAGTAGAGAAAG AGATGGCCAAACTCGAAGGTAGAGGTAAATCATGGAGAATAACTAAGATG CAACCTTATCTGAAGGAGCGTTTTGATTTAGCTATTGGCTTTCAATTTTG TGGTGAGAAAAATGATTCACGTTTAGCTTTAGAGCTATGTTTGGAACANC GACTGGTAAATCATGGAGAATAACTAAGATGCAACCTTATCTGAAGGAGC GTTTTGATTTAGCTATTGGCTTTCAATTTTGTGGTGAGAAAAATGATTCA CGTTTAGCTTTAGAGCTGTGTTTGGAACATTTGATAGATATTCTCATGTT TAACCGAGGTGACCATTCAGGCTGTTGGGCACATATTCCTGGTATGCTGT TCTTGCTGGATGAGCCACAAGAAGCTTATGATTACTTAAAATGGTGGCAA GTGTTGCATAACGATGGTTATTATGACCACACTAAATTCGAGCTTCCAAG CGGTGACAAATTAAAAAATGAGAATATCTTCGAGGATCTGTCGGAATTGA ATCTCAGTAAAAAACATGTTCCTTGGTTGGTTTCAATGTATATGGTAAAA TACAAGATGTTGAGGAAAATCGAGAAAGACAAGATTTCCTATGAGTCATT TCTTCTTGGAACACACCCTAGAGTTGGTGAAGATTCACCCATCCAGCAAA TCGGTGGAGTTTCGGTCATCTTACACAACATCAAGAAATGTTTCTCTCCA ATTGATAAATATGAAACTATCAGGAATCAAACGATTCAAATTTTAAAGTT TATCGATTCCAAAAACAAATACATCATTCCTGGGTTTCTGAATTATAAAG TGCTCCTTGAACAGCCAAACCCACTGTATGTTGGGGAAGGAGGGAGCCTT CAAGACCAAGCTTATGGTGCTGTTTGGTTTGATATTAAACATTGGGAACC CGTACCTGATATCTTCATCCTCACCAAAGAGCTTTACATTCAAATACATG GAAAAGTGAAAGCTGAACGCGACATAGCTGAACTACCGAGAGAAAAAGTA TCACTTGCCAAAGTGCTAGGCAAAGCACACCTAGCTTGAAAGTAGTTTCC ATATCATTCAAAGACACAACATTACTGAATACGCTTGATTGCTTTTGTAG CGGCAATTTAAGAGGGGTATATGTTTGACGTGAACCACTCCCAATAAAGT GCGGGATACCAAAAATATTGCCACTTTAAACTTTTGACCTTAAAACCTCG AGGAGTGCTTACTATTCAAGCCAAACGAAAAGACGATGTATTTCTCGGTG ACTTTACAATGTATTTGGTGGACATGGTTTAATTCGTTACGATTAGCATT ATCTTCTTACTATTTTTATATTGTATTTTTATGTCATTCACTTCGTTCAT TTATACATTTTCCTTTAAAAACGAAATCTTTCTGCTTTATTTACACCGAA GTCGAATTCGAGGAAGTAAATGAAAAAAATCGAACGAATCGACTTTACAG TTTAGTGTTATGCAAATTTACCGTGTTTGTTTCGTTTTAGAGTTAGTAAA AATAATAAGATGGAGCCAAGAATCGTCAGTGAAACAACAGTATCTCCAAG AAGCACTTCATTTGAATGCAGTAACTGTTCGAAAGATGATGCCGAACAAA GATGTTCAAGATGTACGGCCGTCAAATATTGCTCCAAAGAATGTCAAAAA GATCATTGGGTGAAACATAAAGCTTACTGCAATGAGATCAAGAAGTTATT AAAGAAAGTGGCTCTTGAAAGAGAACCATTGAGACGATATGAGGATTGGT TTGGAAACGAACCTTATGATTTGTTTCCAGATGATGTCGGTCATTTCTGG AGTTTAGTCGAGCCACGAAACTATTGTCGAGCACGACATGCTTTATCCAT GCGTTTGCACGAGTGTGGGATAAAAAATAATTCAAAATTGGCTTTAGAAC TTTGCGTGGAACATTTGTTAGACTTGGTTTGGTTGAGTCGAGGCGATAAC CTTGGGGTACGTTCGCTTATCCCAGGAATTTTATGCGTTTTGGGTGAAGT GCAAGAAGCTTACGATTTCTTGAAATGGTGGAAAGTTTGTGATCCTGATG GGCGCTATGATTGGGGGAACCTGGACCTCCCTTACTGTAATTTAAAAGAT GAAGATATTTTTGAAGATTTGTCGCTTTTATGTCTTCATAAATACACAGA TGCTTTCTCCTTGGTTTCGCTATTCTTGATTAAATACAAAGTTATGAATC AGCTAGAGAAGGAGAAATTTTCCTATGAGACTTTTCTCCTTGGTACACAT TCAAGACTTGGAGAAGAATCTCCAGTCCGCAAGATCAGTGGAGTATCTGT TGTCTTACAGAATATCAAACACCTTATAGCACCTGGTAGTTACAAAAAAA TCAACATTTTGAAACAACATTTGGAAGAATTAGCGAAACGAATTGATGAA GGAAATAAATTTGCGATTCCTGGACTGTTGAATTCAGCAGATCTTCTAGC TCACCCTCAGCCTCAATACACTTCACCTGGCACTCAGAATGAAGCTCATT CGATCACAATTTGTGAGATAGATCATTGGCTAGCTACCCCTGGCATTCAT TCGTATTTGAAAGATTTATACATCGGTCTACATGGTAAAAAGAAAGCTGA AAAAAACATTGCAGAAATCCCTAATGAGAAAGCCATGCTAACCATAGATG GCAGCGATGTTTATCATATGGACCAAGCAAAAATCATGTAACTTGTTCGT TCTTAACAGACCATTGTGTATAGTTCTTTTAATTTTGGTTTTTTGTGTTG TCTAAAGTGAATAGTTGGAGCCTCTGAACCTTTTTGTGACAGTTACTCAC AAACCACAACGTTCAACGTCGTTGAACATTCGTCTGGCGATGTAACTACA TAGACGTTAAATGATCATTAAATGGACTTTAAATGAAATGGACTTTATTC GGACGTTTTGTCCCAAGGGTGAATGTTATATACGGAAGCACCCAAAAAAG ATCTGGTCTTTTTCACTAGTTTTAAATTCAAACAATAAAGTTACTGGCAA ATGCCTGGACTATTTTGAGTGCCTTGTATATAAAACATTACGTCATCAAT ATCCAGTTTTGGTGTGTTTAAAATTTCGAACCAAACTAAGAGGTTAGTTA GTGTTATTCAAGATAACATTGTGTAGCACTAATTTCTTGTCGTCGTGTTC AAATATCATGTTTCATGTTTGTCTTTTGTTCTGTTTTTTCGCTTTTTCAA TTTTTGAAGCATTTTTTCGTAAAAAAAAGTCAAAGACTTTG

Coding sequence (CDS) from alignment at scaffold_106:297010..302450-

>TCONS_00046170 ID=TCONS_00046170|Name=TCONS_00046170|organism=Clytia hemisphaerica|type=CDS|length=2424bp|location=Sequence derived from alignment at scaffold_106:297010..302450- (Clytia hemisphaerica)
ACCCTAGAGTTGGTGAAGATTCACCCATCCAGCAAATCGGTGGAGTTTCG
GTCATCTTACACAACATCAAGAAATGTTTCTCTCCAATTGATAAATATGA
AACTATCAGGAATCAAACGATTCAAATTTTAAAGTTTATCGATTCCAAAA
ACAAATACATCATTCCTGGGTTTCTGAATTATAAAGTGCTCCTTGAACAG
CCAAACCCACTGTATGTTGGGGAAGGAGGGAGCCTTCAAGACCAAGCTTA
TGGTGCTGTTTGGTTTGATATTAAACATTGGGAACCCGTACCTGATATCT
TCATCCTCACCAAAGAGCTTTACATTCAAATACATGGAAAAGTGAAAGCT
GAACGCGACATAGCTGAACTACCGAGAGAAAAAGTATCACTTGCCAAAGT
GCTAGGCAAAGCACACCTAGCTTGAAAAAAACTAAGAATGCACAAAGAAA
AAAGAAAAATAAGCGAAACGACGGTTTCCCCAAGAAGCACTTCGTTTGAA
TGCAGTAATTGTTCAAAAAATGAGGCTCAAAGCAGATGTTCAAGATGTAC
GGCCGTCAAATATTGCTCCAAAGAGTGTCAAAAAGATCATTGGGTGAAAC
ATAAAGTACTTTGCAAGGATATCAAGAAGAAAATGATATTATTAGAAAAG
GAGGCAGCGCCGCTACGAAATTTCTTCAATAAAAACTTATTCAAAGAGGA
GGTTGGTAACTTTATGAGAATAGAACAGACCCAGCTCTATTGTCAGCAAC
GTTTTGAACTAGCAACAGCTTTTCATGTATGTGGTATGAAAAACAATTCG
CGATTAGCTTTAGAATTGGCTGTGGAACATTTATTGGATATCTTGTTTTT
AAACCGAGGTGATTATTTAGGCGTTCGTGCCCATATCCCTTCAATGCTGT
TCATGCTTGATGAGCCTGAAGAAGCTTACGATTTCTTAAAATGGTGGCAA
GTTTCACATCAAGAGCGTTATGATTACTACAATCTTGATCTTCCTTATTG
TAACTTGAAGGGTGAAGATATCTTCGAGGATATGTCGAAATTACACCTCG
GGAAAACACATCCTCAATGGCTAGTTTCAATGTATATGGTGAAATACAAG
ATGTNAAAAACGCATCCTCAATGGCTAGTGTCAATGTATATGGTGAAATA
CAAGATGTTCCAGAAAATCGAGAAAGACAAGATTTCCTATGAGTCATTTC
TCCTTGGAACACACCCTAGAGTTGGTGAAGATTCACCCATCCAGCAAATC
GGTGGAGTTTCGGTCATCTTACACAACATCAAGAAATGTTTCTCTCCAAT
TGATAAATATGAAACTATCAGGAATCAAACGATTCAAATTTTAAAGTTTA
TCGATTCCAAAAACAAATACATCATTCCTGGGTTTCTGAATTATAAAGTG
CTCCTTGAACAGCCAAACCCACTGTATGTTGGGGAAGGAGGGAGCCTTCA
AGACCAAGCTTATGGTGCTGTTTGGTTTGATATTAAACATTGGGAACCCG
TACCTGATATCTTCATCCTCACCAAAGAGCTTTACATTCAAATACATGGA
AAAGTGAAAGCTGAACGCGACATAGCTGAACTACCGAGAGAAAAAGTATC
ACTTGCCAAAGTGCTAGGCAAAGCACACCTAGCTTGAAAAAAACTAAGAA
TGCACAAAGAAAAAAGAAAAATAAGCGAAACGACGGTTTCCCCAAGAAGC
ACTTCGTTTGAATGCAGTAATTGTTCAAAAAATGAGGCTCAAAGCAGATG
TTCAAGATGTACGGCCGTCAAATATTGCTCCAAAGAGTGTCAAAAAGATC
ATTGGGTGAAACATAAAGTACTTTGCAAGGATATCAAGAAGAAAATGATA
TTATTAGAAAAGGAGGCAGCGCCGCTACGAAATTTCTTCAATAAAAACTT
ATTCAAAGAGGAGGTTGGTAACTTTATGAGAATAGAACAGACCCAGCTCT
ATTGTCAGCAACGTTTTGAACTAGCAACAGCTTTTCATGTATGTGGTATG
AAAAACAATTCGCGATTAGCTTTAGAATTGGCTGTGGAACATTTATTGGA
TATCTTGTTTTTAAACCGAGGTGATTATTTAGGCGTTCGTGCCCATATCC
CTTCAATGCTGTTCATGCTTGATGAGCCTGAAGAAGCTTACGATTTCTTA
AAATGGTGGCAAGTTTCACATCAAGAGCGTTATGATTACTACAATCTTGA
TCTTCCTTATTGTAACTTGAAGGGTGAAGATATCTTCGAGGATATGTCGA
AATTACACCTCGGGAAAACACATCCTCAATGGCTAGTTTCAATGTATATG
GTGAAATACAAGATGTNAAAAACGCATCCTCAATGGCTAGTGTCAATGTA
TATGGTGAAATACAAGATGTTCCAGAAAATCGAGAAAGACAAGATTTCCT
ATGAGTCATTTCTCCTTGGAACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029492XLOC_029492Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046170-proteinTCONS_00046170-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046170-exon-scaffold_106-1575043694:301662..302450TCONS_00046170-exon-scaffold_106-1575043694:301662..302450Clytia hemisphaericaexon
TCONS_00046170-exon-scaffold_106-1575043694:297010..299636TCONS_00046170-exon-scaffold_106-1575043694:297010..299636Clytia hemisphaericaexon
TCONS_00046170-exon-scaffold_106-1510915933:301662..302450TCONS_00046170-exon-scaffold_106-1510915933:301662..302450Clytia hemisphaericaexon
TCONS_00046170-exon-scaffold_106-1510915933:297010..299636TCONS_00046170-exon-scaffold_106-1510915933:297010..299636Clytia hemisphaericaexon
TCONS_00046170-exon-scaffold_106-1491911889:301662..302450TCONS_00046170-exon-scaffold_106-1491911889:301662..302450Clytia hemisphaericaexon
TCONS_00046170-exon-scaffold_106-1491911889:297010..299636TCONS_00046170-exon-scaffold_106-1491911889:297010..299636Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_106supercontigscaffold_106:297010..302450 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.249299 0.161648 0.202641 0.0754353 0.921781 1.26355 0.609173 0.3838 0.702534 0.593224 0.259844 0.625613 0.608989 0.462437 0.199632 0.181352 0.309895 0.12172 0.0093796 0.0475917 0.156514 0.163899 0.397771 0.388273 2.42314 3.23502 0.0993212 0 0.136383 0.182617
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046170 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top