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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046154 ID=TCONS_00046154|Name=TCONS_00046154|organism=Clytia hemisphaerica|type=transcript|length=699bp
ATNCATGTACGAAGAAAGAATTATCGGCTGTGTTTGCGAAGAAGAAGCGA
CGACAATCGTTTGGATGGTACTCAAGAAAGGAGGTGCTCAACGTTGTAAA
TGTGGGAACTTCTTTCAATTAGTACCAGGAAAAGCTAATGCATTGGCTGA
CTAATAAAATCATTAATCAAATCAATGAACTACACCAAAATTATCTCACG
TATACTGGCTGTCAATACCAACAAACCTGTACTTGCAATAATGAACTTGT
TTATAAAATATACAAACCTAAAAAAATTCGAAAATTACACGTGCACAGAA
TTTCGTGAACTTTTTCCTTCTTTAAAATTTTTTTGAATATTGTTGATTTT
TTTTTTATGTTTCCCGTTATATTTGAATTGGCTAAAAAAATGGTGGTTTT
AAATATTTTTTTATTAGCATGAACTTTTTAAAAGGAGGCTCTGAATGCAA
CTAGCTGAATACGAGTGGCGATCGAAATGTTTTTAATATTTTGTGGATGT
GTAGTTTGATTTTAAAAAATAATAAAAAACCGAAAAAACTATTTGGTGCT
TATTTACTTTCTGTTAAAAAGGtttgattttgaaagttctttcaatcaaa
agtttCGAACCTGTGTAATTGATATGGAAGCTTTTAAGTTCTAAACTATC
TATATATTCGAAGTCCAGCTTTTGAACAtgatttgaaaaagattttctg Run BLAST on NCBI transcript from alignment at scaffold_106:43735..44684- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046154 ID=TCONS_00046154|Name=TCONS_00046154|organism=Clytia hemisphaerica|type=transcript|length=950bp|location=Sequence derived from alignment at scaffold_106:43735..44684- (Clytia hemisphaerica)
ATNCATGTACGAAGAAAGAATTATCGGCTGTGTTTGTAAGTTCTTAAAAG
TTCTTTTAAGTCTTCTCAAAATTAGGTGACCGCTTCATTTGTTTTCACTT
TCGCAGCACCTTTTTATGCTGAATTAAAAAAAAATTCAGAAATCTTCAAT
CTTTTCGATTATTCTTCCCGAAAATATAAACGAGGTATATGTATAACATA
AACAGGTGCTCGGAAAACATTTTACAAGATCCGAGAAAATAAGATCACGA
TTTTCCTTTGACCTTCCTCTCATGTTTTCCTTTCAGGCGAAGAAGAAGCG
ACGACAATCGTTTGGATGGTACTCAAGAAAGGAGGTGCTCAACGTTGTAA
ATGTGGGAACTTCTTTCAATTAGTACCAGGAAAAGCTAATGCATTGGCTG
ACTAATAAAATCATTAATCAAATCAATGAACTACACCAAAATTATCTCAC
GTATACTGGCTGTCAATACCAACAAACCTGTACTTGCAATAATGAACTTG
TTTATAAAATATACAAACCTAAAAAAATTCGAAAATTACACGTGCACAGA
ATTTCGTGAACTTTTTCCTTCTTTAAAATTTTTTTGAATATTGTTGATTT
TTTTTTTATGTTTCCCGTTATATTTGAATTGGCTAAAAAAATGGTGGTTT
TAAATATTTTTTTATTAGCATGAACTTTTTAAAAGGAGGCTCTGAATGCA
ACTAGCTGAATACGAGTGGCGATCGAAATGTTTTTAATATTTTGTGGATG
TGTAGTTTGATTTTAAAAAATAATAAAAAACCGAAAAAACTATTTGGTGC
TTATTTACTTTCTGTTAAAAAGGTTTGATTTTGAAAGTTCTTTCAATCAA
AAGTTTCGAACCTGTGTAATTGATATGGAAGCTTTTAAGTTCTAAACTAT
CTATATATTCGAAGTCCAGCTTTTGAACATGATTTGAAAAAGATTTTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046154-exon-scaffold_106-1575043694:44650..44684 | TCONS_00046154-exon-scaffold_106-1575043694:44650..44684 | Clytia hemisphaerica | exon |
| TCONS_00046154-exon-scaffold_106-1575043694:43735..44398 | TCONS_00046154-exon-scaffold_106-1575043694:43735..44398 | Clytia hemisphaerica | exon |
| TCONS_00046154-exon-scaffold_106-1510915933:44650..44684 | TCONS_00046154-exon-scaffold_106-1510915933:44650..44684 | Clytia hemisphaerica | exon |
| TCONS_00046154-exon-scaffold_106-1510915933:43735..44398 | TCONS_00046154-exon-scaffold_106-1510915933:43735..44398 | Clytia hemisphaerica | exon |
| TCONS_00046154-exon-scaffold_106-1491911889:44650..44684 | TCONS_00046154-exon-scaffold_106-1491911889:44650..44684 | Clytia hemisphaerica | exon |
| TCONS_00046154-exon-scaffold_106-1491911889:43735..44398 | TCONS_00046154-exon-scaffold_106-1491911889:43735..44398 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_106 | supercontig | scaffold_106:43735..44684 - |
Blast
The following BLAST results are available for this feature:
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