TCONS_00045993 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045993
Unique NameTCONS_00045993
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2447

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045993 ID=TCONS_00045993|Name=TCONS_00045993|organism=Clytia hemisphaerica|type=transcript|length=2447bp
GCGAATATCCCTTCGGAGTCTTTATTTtatgagggtaattttgaaggTCT
TTAAAGTGGTTAAGTTAATGTTTCGttacattttgttgttttttgtttga
acaTTTGGTTTCGTGTTTTAATTAGATAAAATTACTGAAGCgtacaaaac
attttcaattttcattttttgaagcaTGTTATCTTTTCTTCTTTGTATTA
TCTTGTTATTTTGATTGAGAGAATTTAGCTGAAGATGGTTTTTACTCCAC
AAATCAAGTTGATACGAACGGTCAGACTATGGGTGTTTTTTGTACTGTGT
TCCATCGCTTACTACTTgttaaaacacaaagaaattttattattcCATCG
TAACAAAAGATCCAATACTCTCCAAACATCTCATGATGAAGAGATTGAAT
ATTTTCGAACGTTATGGAAATTGCAGCGAGAACGTCGTTTCGATTTCAAT
GCTCTCATGGAACCTTGTAAGGATGATATGAAATGGAAATCGTTTTATCC
AGAGCGAAACGCATCGTTCATCACCTCAGCTAAAACAACTAAAGTAGAAC
TTGATATACGACAGACAGGACAATATAGTAGAGTGCTCATTCACGCCTTC
AGTTTGCTGAGAACGCCCAAACACGTGGGTGGTGACACATGGCGTATCTT
CATTCGTGGTGCAGCTTCAATGCCGGTCACTGTATTGGATCACTTGAATG
GAACATATGAAGCTTTTTTCTTGGTCACAACGCCCGGCAAATATCACGTG
GAACTCCATTTAGAATATACTTTATGTGATGGTTACAAAGATCCCCCTCA
ACAGTGGTTTGTCAGAGGGAATGAGCAGGGTAAAAGCCAACCAGATCATA
TGCTTCCTGGCTACGAGAAAGCATACGTGGAGGAGAAGTTTGACGGAGAT
CTCTCCTTCGTTGTGGTGGATGGTcacagaaatattttcaaagAACTGTC
AGCACAATTAgttgaagaaggagaagaacaAACATCATGTTTGATGTGGG
ATGGCTTCGGTGAATGGAGTGACCAGCTGCAATGGACACCCCTCATCAAA
AAtccatttcaaaaaagttctttGCAAAAGAAAGTGGAAGGGCGAGGTGT
GTTTTGGATATACGGTGATTCAGTGGGAGATTTCTTTTACCGTGCTGTTT
GGAACACTCCATTATGCAAAGTACTCTTCATAACTTGCAAAAGGACGTAT
AACTGGGTGTATAATTTGCCGAACAATGCGCCACCGCGCCAAACCTCCAC
CACTCTAACCTATGATAACCGAGATTTCGATATAGAGCGCCTGGTTCACG
AGATTGTGAACGTTATTTCTCATCCACCAATGGATGATGAGTCAGCACTT
TTACTGAACTTGGGGCTTCATTACGTCATGGGCATCCCTGTCAATCAATT
CATAGAACTGATGAAGAGAGTTGGGGAGATGCTTCAACAAAACAATCTTT
ACAACAGTACGATCATCTGGAAAACGACCACAGCACTTCAGAAATGGAAA
TATGGAGCACCTGAATCGAACGCAAGGCATGCCAAAAGTCATCGCTTTCT
CACTCAACAGaGAGTGGAAATCTTCAACGCTATTTCAACGAACATCTTGT
GTCAAGCTGGTGTGCCAATCTTAGACGTTTTCCCAATGAGTTATTCTTAT
CCTAATGGGACTGGCTCCCTGGCTAAACCATGGGATGCTGTACACTACAG
CAGGAAAGCGTTCATTCCTGTTGAACAATATCTATTCTCATTCTTCAAAA
GgaaaacttaaaactttccaTCGAAAAATAGGAATAAACATCTGATGTTC
AGGAAAAGTGATCTACcaatatcttgacaaacctGCTTACCTTTTTTGGA
ACACTCGGTAGATTTGGAGAATTTGTCTATAAATCAAATTCCATTTCCTT
TATTATTGACACCCGGGGGCACTCTGACTCTATTTCTAAACGACAGTATG
TGccgcaaaaaaaattggctttcaaaatcaaaCCCTCATTGTACAGCTCT
TGAGTAGTGAAAAAGGTATCCTTTATACATACAATAATagcttcccagct
ggcacacaacgttgctttaacgttcatctaacgttacatggacgttgtga
acattagatgaacgttgaaacaacgttgtgtgccagcttggttGCAATAA
TAATACATATACAATAGTGATGGCTTTCACCGAACCTATTTCTGATCCTG
ACAGTGCAGTTTGATTTCATGTCTTCTTTTGCTGAAGCCGAAAATGAGCC
TGAGAAGACGACTCGATGTgtaaatgaaaaatatgaaattggtGTGAGTA
AAAACTTGCAAAGATACTAATTTTTACTGTCATGTTGGTGTACCAAAACA
CACCCTGGCACAGTGCATCCAGCTAAGAGGAGACCCTCACAGATAGTGTA
CTCTATTGAAAGTACACTCTTACAGTTCAGGGTCTTGAAAAACCCAC
Run BLAST on NCBI

protein sequence of TCONS_00045993-protein

>TCONS_00045993-protein ID=TCONS_00045993-protein|Name=TCONS_00045993-protein|organism=Clytia hemisphaerica|type=polypeptide|length=508bp
MVFTPQIKLIRTVRLWVFFVLCSIAYYLLKHKEILLFHRNKRSNTLQTSH
DEEIEYFRTLWKLQRERRFDFNALMEPCKDDMKWKSFYPERNASFITSAK
TTKVELDIRQTGQYSRVLIHAFSLLRTPKHVGGDTWRIFIRGAASMPVTV
LDHLNGTYEAFFLVTTPGKYHVELHLEYTLCDGYKDPPQQWFVRGNEQGK
SQPDHMLPGYEKAYVEEKFDGDLSFVVVDGHRNIFKELSAQLVEEGEEQT
SCLMWDGFGEWSDQLQWTPLIKNPFQKSSLQKKVEGRGVFWIYGDSVGDF
FYRAVWNTPLCKVLFITCKRTYNWVYNLPNNAPPRQTSTTLTYDNRDFDI
ERLVHEIVNVISHPPMDDESALLLNLGLHYVMGIPVNQFIELMKRVGEML
QQNNLYNSTIIWKTTTALQKWKYGAPESNARHAKSHRFLTQQRVEIFNAI
STNILCQAGVPILDVFPMSYSYPNGTGSLAKPWDAVHYSRKAFIPVEQYL
FSFFKRKT
Run BLAST on NCBI

transcript from alignment at scaffold_105:461258..467146+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045993 ID=TCONS_00045993|Name=TCONS_00045993|organism=Clytia hemisphaerica|type=transcript|length=5889bp|location=Sequence derived from alignment at scaffold_105:461258..467146+ (Clytia hemisphaerica)
GCGAATATCCCTTCGGAGTCTTTATTTtatgagggtaattttgaaggTCT
TTAAAGTGGTTAAGTTAATGTTTCGttacattttgttgttttttgtttga
acaTTTGGTTTCGTGTTTTAATTAGATAAAATTACTGAAGCgtacaaaac
attttcaattttcattttttgaagcaTGTTATCTTTTCTTCTTTGTATTA
TCTTGTTATTTTGATTGAGAGAATTTAGCTGAAGATGGTTTTTACTCCAC
AAATCAAGTTGATACGAACGGTCAGACTATGGGTGTTTTTTGTACTGTGT
TCCATCGCTTACTACTTgttaaaacacaaagaaattttattattcCATCG
TAACAAAAGATCCAATACTCTCCAAACATCTCATGATGAAGAGATTGAAT
ATTTTCGAACGTTATGGAAATTGCAGCGAGAACGTCGTTTCGATTTCAAT
GCTCTCATGGAACCTTGTAAGGATGATATGAAATGGAAATCGTTTTATCC
AGAGCGAAACGCATCGTTCATCACCTCAGCTAAAACAACTAAAGTAGAAC
TTGATATACGACAGACAGGACAATATAGTAGAGTGCTCATTCACGCCTTC
AGTTTGCTGAGAACGCCCAAACACGTGGGTGGTGACACATGGCGTATCTT
CATTCGTGGTGCAGCTTCAATGCCGGTCACTGTATTGGATCACTTGAATG
GAACATATGAAGCTTTTTTCTTGGTCACAACGCCCGGCAAATATCACGTG
GAACTCCATTTAGAATATACTTTATGTGATGGTTACAAAGATCCCCCTCA
ACAGTGGTTTGTCAGAGGTGAGATGAATGATATATATTCTAACAACACTA
CGATTAACATTGTGGAAGGCAGAAGAGAGTGATCATGTTAGAGTTGAGGG
CTACCCTAAGGGTAGAAATTTTGGCGAACTTGGCGAATTGCCTAAAaatt
tcgccaaattcgccaaaatttctttccgccaaatttaaatttataagTCA
TTCagaaaaataagttctcgctaaatttaattttctttcaatttagtctc
tatttttcctaaaaaaaatttttttttgtcagctaaaatattgaacaaaa
atgggtcgttcgccaaaattaattctcgccaaagtGCACCAAAATTGGCG
AATGGGTTTATTTCTCGACtattggtgattttatttttcagttatGGAAT
GCTTTCTCTTCTCTCCTTTTCCAGGGAATGAGCAGGGTAAAAGCCAACCA
GATCATATGCTTCCTGGCTACGAGAAAGCATACGTGGAGGAGAAGTTTGA
CGGAGATCTCTCCTTCGTTGTGGTGGATGGTcacagaaatattttcaaag
gtaTATATTTTGCTTATGTTCTTGTTTGATTGTTTACATCAACATAGATG
TTTGCTAATTATCTTTGGAAttgaatacagttgactctctttAAATTCAT
CTTCAAGGGGCCAGGGGTTTTCTTCTAATTAGAAAACGAGTAGAATAttc
tagttcgaattatagaaagactCGGAAAGTAGaggctcgaattagagaga
gttgactgtaaaaTGATTTCTTTGTGATAGTATTTTTTGAGGTCTTACTT
CCTTACTTAAATTTTACTCTTTTATATTTCGGAGGCTCAATATTTGTGTC
GAAAAATTGAAAcctcaaatgaaagaaaaatctcaaatcagagTTTTCAC
GGAAGGACggaatcaaatcttttttgaacgGAGTGACGGTGTCAACAAAT
ATTTAGATGGGATTTCTGGTTTTGGAAAAAGTATTCAAAATTTCCGGATT
TTTGACGGAAATCTTgaattaaaaagtaaaataaaatcgGTGATGGAATT
TCTGCTCTTGGTTAGACGGATGGCGGATAGGGGGAATCGGGGACCCCCTG
AAACTCTTTCTCAGAGGGACAGACTGTATTGAAAAGTTATTCTTCCATGC
TTCTTTGTCTTCAGAACTGTCAGCACAATTAgttgaagaaggagaagaac
aAACATCATGTTTGATGTGGGATGGCTTCGGTGAATGGAGTGACCAGCTG
CAATGGACACCCCTCATCAAAAGTATACCTCATCTTTCTTCGCTTCTTAC
TTTCTTCGAAAGTATACCTTTGTTGCTTCCTTTGCTTCTTGCTTGCttga
actttcattttttttaaagaagtcttTTACCTTTCGAATGGTTtcctttt
aaaaagttttcaaactaaGGAAACTTGGATTTAAAAGTGAAAAGAATTGA
ATAACCTTTAAAGGTTTCAGTGAGATAAGCAACCCTGTCTCAAGAAATTG
AGAAGAGAGAAAGGGAGTTTATTACCTTGATTCTTCGATAATTAGTCTAA
GCCTTATTCTAACCTCTTTGCAATTCCACGGCTTCCCCATTACGCTTATC
TCTTCTTCAACCTTTAGAtccatttcaaaaaagttctttGCAAAAGAAAG
TGGAAGGGCGAGGTGTGTTTTGGATATACGGTGATTCAGTGGGAGATTTC
TTTTACCGTGCTGTTTGGAACACTCCATTATGCAAAGTACTCTTCATAAC
TTGCAAAAGGACGTATAACTGGGTGTATAATTTGCCGAACAATGCGCCAC
CGCGCCAAACCTCCACCACTCTAACCTATGATAACCGAGATTTCGATATA
GAGCGCCTGGTTCACGAGATTGTGAACGTTATTTCTCATCCACCAATGGA
TGATGAGTCAGCACTTTTACTGAACTTGGGGCTTCATTACGTCATGGGCA
TCCCTGTCAATCAATTCATAGAACTGATGAAGAGAGTTGGGGAGATGCTT
CAACAAAACAATCTTTACAACAGTACGATCATCTGGAAAACGACCACAGC
ACTTCAGAAATGGAAATATGGAGCACCTGAATCGAACGCAAGGCATGCCA
AAAGTCATCGCTTTCTCACTCAACAGGTCAGAAGATtttctactttaatc
gtagaaattttagcgagactaattatAGCGTATATtggcgagtcaggaaa
atcttgattctGTTTGGATTTACTTTAgtgaatcacgatttcaaaaaact
ttgcgtggataaattttagcgaatactcgtattacattattgaatgaatt
cgttttctagcatttcattgcactgaaaccctttctattgataaaaatgt
atcaaggcaatttAACCAGAAATTttgcgcggataaattttagcaacctg
tcgattcggcgtgtttaagcgagatttattttagcgaaaatagggaaaac
tcgctaaaacgctaaaattagtctcgctaaaatttctacgattaaagtat
tgcGCTACTATACTATTTTTACGAGCTTTGACTGGGATATTTCTGTACCA
TTaacaatacacgcttttttataagaatagtgtactttagATGAGGGTCa
aatattcttaagaaagtgccaaaattgagggtgaaataattcttaacgta
ttcttactatTTTAGACTTTTGAGTTTTCTTCCTCAAAGATTGgatttat
ctctaacaaaggaagcagtttttctgttaaccaaatacaaaatcactgta
ttcttatcaaattctgtgaaattcaccctagagggtgtattcttagggta
ttcttacgatttgaccaattttcgccgtGGTATTCTTATAgcagatattc
ttataaaaaaagcgtgtgtcTGTACTGTAGGTTGACGTCACAACTAAAGT
AACCGACGGCTATAAAATGACTGGTCTATCATTTACGTTTTTAGACTTCG
GAATTAGCCAGTTATCTGGtgattcaaaaaaaacttcggatgtttgacgg
tttgctTGGACCTACCAACTTGTCCCATAATCTTCATTTAGACTTGATCT
AGCTCGAGGAGGGTGTATGTTGCTTTTTTAATTTGGATAATTAGCTCGAA
AGTTCTTgtcatttaaagtaaaaaatcacatttcaaaatgTGTAAAATTT
TGCTTATAGAAATACAGTAAGTGattgaatttcttcttcttttttagaca
attttttagaaaaagattttgaaaatacttcaaatttcttgatttttttc
tcgatttctaATTATTTCTGATAATTACTTTTTATATCAACAAGGCAATC
AGGAAAGTCGTAAAACTCATTaaaagactcaaatttgttaAATCATGTGT
GTTTTTCATGTTAATTGTTGAAATTTAATCACCCAATTTTTGCATCATTA
TGTATTCtttgaaaagtgatttttgcCTTTGAATATCTATAATTTTGAAT
CAATTgtccaaatttaaaaagtaatacatcaaaatttaagttagactcTC
CTCTTCCATGATAAAGCAAAGCCAACCTTACAGATCACTTTGATGGATCT
GAAGAAACTGCCAAACATCCGAAGAATTTGAACCACCCGGGATGTATGAa
acttacacgctttttttatgagaatggtgtttttccatttcatcatggat
attcttaacttttttgggaaaatcatcataaaatattcttacggtgtATT
TTAAGGTAATGGTCGTAATTCCATCTAAATTTAACATAAAATACATGTAA
TACACAGATGTAGCATGAAATGGCatatttaaagggacattacagtagta
aaatgtaaacattgctcgaaccacgtgtcattaaaaagaacaattaaaat
cacgtgtccaaaacaaacttgtaaaacaatNTAtgagaatggtgtttttc
catttaatcatggatattcttaacttttttgggaaaatcatcataaaata
ttcttacggtgtATTTTAAGGTTATGGTCGTAATTCCATCTAAATTTAAC
ATAAAATACATGTAATACACAGATGTAGCATGAAATGGCATATTTAATGA
TGGTATCGTGCCTTAATGGTGTTTCCAAATTCCGTGATGATGATATATAG
CATATGCTTTATTTTTTTGGCTAATTTCGTcatgaattatatttttttaa
agcgtGTACTTTGCTGCAAGTCTTGAgagaatttcaattttctttttcat
agaGAGTGGAAATCTTCAACGCTATTTCAACGAACATCTTGTGTCAAGCT
GGTGTGCCAATCTTAGACGTTTTCCCAATGAGTTATTCTTATCCTAATGG
GACTGGCTCCCTGGCTAAACCATGGGATGCTGTACACTACAGCAGGAAAG
CGTTCATTCCTGTTGAACAATATCTATTCTCATTCTTCAAAAGgaaaact
taaaactttccaTCGAAAAATAGGAATAAACATCTGATGTTCAGGAAAAG
TGATCTACcaatatcttgacaaacctGCTTACCTTTTTTGGAACACTCGG
TAGATTTGGAGAATTTGTCTATAAATCAAATTCCATTTCCTTTATTATTG
ACACCCGGGGGCACTCTGACTCTATTTCTAAACGACAGTATGTGccgcaa
aaaaaattggctttcaaaatcaaaCCCTCATTGTACAGCTCTTGAGTAGT
GAAAAAGGTATCCTTTATACATACAATAATagcttcccagctggcacaca
acgttgctttaacgttcatctaacgttacatggacgttgtgaacattaga
tgaacgttgaaacaacgttgtgtgccagcttggttGCAATAATAATACAT
ATACAATAGTGATGGCTTTCACCGAACCTATTTCTGATCCTGACAGTGCA
GTTTGATTTCATGTCTTCTTTTGCTGAAGCCGAAAATGAGCCTGAGAAGA
CGACTCGATGTgtaaatgaaaaatatgaaattggtGTGAGTAAAAACTTG
CAAAGATACTAATTTTTACTGTCATGTTGGTGTACCAAAACACACCCTGG
CACAGTGCATCCAGCTAAGAGGAGACCCTCACAGATAGTGTACTCTATTG
AAAGTACACTCTTACAGTTCAGGGTCTTGAAAAACCCAC

Coding sequence (CDS) from alignment at scaffold_105:461258..467146+

>TCONS_00045993 ID=TCONS_00045993|Name=TCONS_00045993|organism=Clytia hemisphaerica|type=CDS|length=7635bp|location=Sequence derived from alignment at scaffold_105:461258..467146+ (Clytia hemisphaerica)
ATGGTTTTTACTCCACAAATCAAGTTGATACGAACGGTCAGACTATGGGT
GTTTTTTGTACTGTGTTCCATCGCTTACTACTTgttaaaacacaaagaaa
ttttattattcCATCGTAACAAAAGATCCAATACTCTCCAAACATCTCAT
GATGAAGAGATTGAATATTTTCGAACGTTATGGAAATTGCAGCGAGAACG
TCGTTTCGATTTCAATGCTCTCATGGAACCTTGTAAGGATGATATGAAAT
GGAAATCGTTTTATCCAGAGCGAAACGCATCGTTCATCACCTCAGCTAAA
ACAACTAAAGTAGAACTTGATATACGACAGACAGGACAATATAGTAGAGT
GCTCATTCACGCCTTCAGTTTGCTGAGAACGCCCAAACACGTGGGTGGTG
ACACATGGCGTATCTTCATTCGTGGTGCAGCTTCAATGCCGGTCACTGTA
TTGGATCACTTGAATGGAACATATGAAGCTTTTTTCTTGGTCACAACGCC
CGGCAAATATCACGTGGAACTCCATTTAGAATATACTTTATGTGATGGTT
ACAAAGATCCCCCTCAACAGTGGTTTGTCAGAGGGAATGAGCAGGGTAAA
AGCCAACCAGATCATATGCTTCCTGGCTACGAGAAAGCATACGTGGAGGA
GAAGTTTGACGGAGATCTCTCCTTCGTTGTGGTGGATGGTcacagaaata
ttttcaaagAACTGTCAGCACAATTAgttgaagaaggagaagaacaAACA
TCATGTTTGATGTGGGATGGCTTCGGTGAATGGAGTGACCAGCTGCAATG
GACACCCCTCATCAAAAAtccatttcaaaaaagttctttGCAAAAGAAAG
TGGAAGGGCGAGGTGTGTTTTGGATATACGGTGATTCAGTGGGAGATTTC
TTTTACCGTGCTGTTTGGAACACTCCATTATGCAAAGTACTCTTCATAAC
TTGCAAAAGGACGTATAACTGGGTGTATAATTTGCCGAACAATGCGCCAC
CGCGCCAAACCTCCACCACTCTAACCTATGATAACCGAGATTTCGATATA
GAGCGCCTGGTTCACGAGATTGTGAACGTTATTTCTCATCCACCAATGGA
TGATGAGTCAGCACTTTTACTGAACTTGGGGCTTCATTACGTCATGGGCA
TCCCTGTCAATCAATTCATAGAACTGATGAAGAGAGTTGGGGAGATGCTT
CAACAAAACAATCTTTACAACAGTACGATCATCTGGAAAACGACCACAGC
ACTTCAGAAATGGAAATATGGAGCACCTGAATCGAACGCAAGGCATGCCA
AAAGTCATCGCTTTCTCACTCAACAGaGAGTGGAAATCTTCAACGCTATT
TCAACGAACATCTTGTGTCAAGCTGGTGTGCCAATCTTAGACGTTTTCCC
AATGAGTTATTCTTATCCTAATGGGACTGGCTCCCTGGCTAAACCATGGG
ATGCTGTACACTACAGCAGGAAAGCGTTCATTCCTGTTGAACAATATCTA
TTCTCATTCTTCAAAAGgaaaacttaaATGGTTTTTACTCCACAAATCAA
GTTGATACGAACGGTCAGACTATGGGTGTTTTTTGTACTGTGTTCCATCG
CTTACTACTTgttaaaacacaaagaaattttattattcCATCGTAACAAA
AGATCCAATACTCTCCAAACATCTCATGATGAAGAGATTGAATATTTTCG
AACGTTATGGAAATTGCAGCGAGAACGTCGTTTCGATTTCAATGCTCTCA
TGGAACCTTGTAAGGATGATATGAAATGGAAATCGTTTTATCCAGAGCGA
AACGCATCGTTCATCACCTCAGCTAAAACAACTAAAGTAGAACTTGATAT
ACGACAGACAGGACAATATAGTAGAGTGCTCATTCACGCCTTCAGTTTGC
TGAGAACGCCCAAACACGTGGGTGGTGACACATGGCGTATCTTCATTCGT
GGTGCAGCTTCAATGCCGGTCACTGTATTGGATCACTTGAATGGAACATA
TGAAGCTTTTTTCTTGGTCACAACGCCCGGCAAATATCACGTGGAACTCC
ATTTAGAATATACTTTATGTGATGGTTACAAAGATCCCCCTCAACAGTGG
TTTGTCAGAGGGAATGAGCAGGGTAAAAGCCAACCAGATCATATGCTTCC
TGGCTACGAGAAAGCATACGTGGAGGAGAAGTTTGACGGAGATCTCTCCT
TCGTTGTGGTGGATGGTcacagaaatattttcaaagAACTGTCAGCACAA
TTAgttgaagaaggagaagaacaAACATCATGTTTGATGTGGGATGGCTT
CGGTGAATGGAGTGACCAGCTGCAATGGACACCCCTCATCAAAAAtccat
ttcaaaaaagttctttGCAAAAGAAAGTGGAAGGGCGAGGTGTGTTTTGG
ATATACGGTGATTCAGTGGGAGATTTCTTTTACCGTGCTGTTTGGAACAC
TCCATTATGCAAAGTACTCTTCATAACTTGCAAAAGGACGTATAACTGGG
TGTATAATTTGCCGAACAATGCGCCACCGCGCCAAACCTCCACCACTCTA
ACCTATGATAACCGAGATTTCGATATAGAGCGCCTGGTTCACGAGATTGT
GAACGTTATTTCTCATCCACCAATGGATGATGAGTCAGCACTTTTACTGA
ACTTGGGGCTTCATTACGTCATGGGCATCCCTGTCAATCAATTCATAGAA
CTGATGAAGAGAGTTGGGGAGATGCTTCAACAAAACAATCTTTACAACAG
TACGATCATCTGGAAAACGACCACAGCACTTCAGAAATGGAAATATGGAG
CACCTGAATCGAACGCAAGGCATGCCAAAAGTCATCGCTTTCTCACTCAA
CAGaGAGTGGAAATCTTCAACGCTATTTCAACGAACATCTTGTGTCAAGC
TGGTGTGCCAATCTTAGACGTTTTCCCAATGAGTTATTCTTATCCTAATG
GGACTGGCTCCCTGGCTAAACCATGGGATGCTGTACACTACAGCAGGAAA
GCGTTCATTCCTGTTGAACAATATCTATTCTCATTCTTCAAAAGgaaaac
ttaaATGGTTTTTACTCCACAAATCAAGTTGATACGAACGGTCAGACTAT
GGGTGTTTTTTGTACTGTGTTCCATCGCTTACTACTTgttaaaacacaaa
gaaattttattattcCATCGTAACAAAAGATCCAATACTCTCCAAACATC
TCATGATGAAGAGATTGAATATTTTCGAACGTTATGGAAATTGCAGCGAG
AACGTCGTTTCGATTTCAATGCTCTCATGGAACCTTGTAAGGATGATATG
AAATGGAAATCGTTTTATCCAGAGCGAAACGCATCGTTCATCACCTCAGC
TAAAACAACTAAAGTAGAACTTGATATACGACAGACAGGACAATATAGTA
GAGTGCTCATTCACGCCTTCAGTTTGCTGAGAACGCCCAAACACGTGGGT
GGTGACACATGGCGTATCTTCATTCGTGGTGCAGCTTCAATGCCGGTCAC
TGTATTGGATCACTTGAATGGAACATATGAAGCTTTTTTCTTGGTCACAA
CGCCCGGCAAATATCACGTGGAACTCCATTTAGAATATACTTTATGTGAT
GGTTACAAAGATCCCCCTCAACAGTGGTTTGTCAGAGGGAATGAGCAGGG
TAAAAGCCAACCAGATCATATGCTTCCTGGCTACGAGAAAGCATACGTGG
AGGAGAAGTTTGACGGAGATCTCTCCTTCGTTGTGGTGGATGGTcacaga
aatattttcaaagAACTGTCAGCACAATTAgttgaagaaggagaagaaca
AACATCATGTTTGATGTGGGATGGCTTCGGTGAATGGAGTGACCAGCTGC
AATGGACACCCCTCATCAAAAAtccatttcaaaaaagttctttGCAAAAG
AAAGTGGAAGGGCGAGGTGTGTTTTGGATATACGGTGATTCAGTGGGAGA
TTTCTTTTACCGTGCTGTTTGGAACACTCCATTATGCAAAGTACTCTTCA
TAACTTGCAAAAGGACGTATAACTGGGTGTATAATTTGCCGAACAATGCG
CCACCGCGCCAAACCTCCACCACTCTAACCTATGATAACCGAGATTTCGA
TATAGAGCGCCTGGTTCACGAGATTGTGAACGTTATTTCTCATCCACCAA
TGGATGATGAGTCAGCACTTTTACTGAACTTGGGGCTTCATTACGTCATG
GGCATCCCTGTCAATCAATTCATAGAACTGATGAAGAGAGTTGGGGAGAT
GCTTCAACAAAACAATCTTTACAACAGTACGATCATCTGGAAAACGACCA
CAGCACTTCAGAAATGGAAATATGGAGCACCTGAATCGAACGCAAGGCAT
GCCAAAAGTCATCGCTTTCTCACTCAACAGaGAGTGGAAATCTTCAACGC
TATTTCAACGAACATCTTGTGTCAAGCTGGTGTGCCAATCTTAGACGTTT
TCCCAATGAGTTATTCTTATCCTAATGGGACTGGCTCCCTGGCTAAACCA
TGGGATGCTGTACACTACAGCAGGAAAGCGTTCATTCCTGTTGAACAATA
TCTATTCTCATTCTTCAAAAGgaaaacttaaATGGTTTTTACTCCACAAA
TCAAGTTGATACGAACGGTCAGACTATGGGTGTTTTTTGTACTGTGTTCC
ATCGCTTACTACTTgttaaaacacaaagaaattttattattcCATCGTAA
CAAAAGATCCAATACTCTCCAAACATCTCATGATGAAGAGATTGAATATT
TTCGAACGTTATGGAAATTGCAGCGAGAACGTCGTTTCGATTTCAATGCT
CTCATGGAACCTTGTAAGGATGATATGAAATGGAAATCGTTTTATCCAGA
GCGAAACGCATCGTTCATCACCTCAGCTAAAACAACTAAAGTAGAACTTG
ATATACGACAGACAGGACAATATAGTAGAGTGCTCATTCACGCCTTCAGT
TTGCTGAGAACGCCCAAACACGTGGGTGGTGACACATGGCGTATCTTCAT
TCGTGGTGCAGCTTCAATGCCGGTCACTGTATTGGATCACTTGAATGGAA
CATATGAAGCTTTTTTCTTGGTCACAACGCCCGGCAAATATCACGTGGAA
CTCCATTTAGAATATACTTTATGTGATGGTTACAAAGATCCCCCTCAACA
GTGGTTTGTCAGAGGGAATGAGCAGGGTAAAAGCCAACCAGATCATATGC
TTCCTGGCTACGAGAAAGCATACGTGGAGGAGAAGTTTGACGGAGATCTC
TCCTTCGTTGTGGTGGATGGTcacagaaatattttcaaagAACTGTCAGC
ACAATTAgttgaagaaggagaagaacaAACATCATGTTTGATGTGGGATG
GCTTCGGTGAATGGAGTGACCAGCTGCAATGGACACCCCTCATCAAAAAt
ccatttcaaaaaagttctttGCAAAAGAAAGTGGAAGGGCGAGGTGTGTT
TTGGATATACGGTGATTCAGTGGGAGATTTCTTTTACCGTGCTGTTTGGA
ACACTCCATTATGCAAAGTACTCTTCATAACTTGCAAAAGGACGTATAAC
TGGGTGTATAATTTGCCGAACAATGCGCCACCGCGCCAAACCTCCACCAC
TCTAACCTATGATAACCGAGATTTCGATATAGAGCGCCTGGTTCACGAGA
TTGTGAACGTTATTTCTCATCCACCAATGGATGATGAGTCAGCACTTTTA
CTGAACTTGGGGCTTCATTACGTCATGGGCATCCCTGTCAATCAATTCAT
AGAACTGATGAAGAGAGTTGGGGAGATGCTTCAACAAAACAATCTTTACA
ACAGTACGATCATCTGGAAAACGACCACAGCACTTCAGAAATGGAAATAT
GGAGCACCTGAATCGAACGCAAGGCATGCCAAAAGTCATCGCTTTCTCAC
TCAACAGaGAGTGGAAATCTTCAACGCTATTTCAACGAACATCTTGTGTC
AAGCTGGTGTGCCAATCTTAGACGTTTTCCCAATGAGTTATTCTTATCCT
AATGGGACTGGCTCCCTGGCTAAACCATGGGATGCTGTACACTACAGCAG
GAAAGCGTTCATTCCTGTTGAACAATATCTATTCTCATTCTTCAAAAGga
aaacttaaATGGTTTTTACTCCACAAATCAAGTTGATACGAACGGTCAGA
CTATGGGTGTTTTTTGTACTGTGTTCCATCGCTTACTACTTgttaaaaca
caaagaaattttattattcCATCGTAACAAAAGATCCAATACTCTCCAAA
CATCTCATGATGAAGAGATTGAATATTTTCGAACGTTATGGAAATTGCAG
CGAGAACGTCGTTTCGATTTCAATGCTCTCATGGAACCTTGTAAGGATGA
TATGAAATGGAAATCGTTTTATCCAGAGCGAAACGCATCGTTCATCACCT
CAGCTAAAACAACTAAAGTAGAACTTGATATACGACAGACAGGACAATAT
AGTAGAGTGCTCATTCACGCCTTCAGTTTGCTGAGAACGCCCAAACACGT
GGGTGGTGACACATGGCGTATCTTCATTCGTGGTGCAGCTTCAATGCCGG
TCACTGTATTGGATCACTTGAATGGAACATATGAAGCTTTTTTCTTGGTC
ACAACGCCCGGCAAATATCACGTGGAACTCCATTTAGAATATACTTTATG
TGATGGTTACAAAGATCCCCCTCAACAGTGGTTTGTCAGAGGGAATGAGC
AGGGTAAAAGCCAACCAGATCATATGCTTCCTGGCTACGAGAAAGCATAC
GTGGAGGAGAAGTTTGACGGAGATCTCTCCTTCGTTGTGGTGGATGGTca
cagaaatattttcaaagAACTGTCAGCACAATTAgttgaagaaggagaag
aacaAACATCATGTTTGATGTGGGATGGCTTCGGTGAATGGAGTGACCAG
CTGCAATGGACACCCCTCATCAAAAAtccatttcaaaaaagttctttGCA
AAAGAAAGTGGAAGGGCGAGGTGTGTTTTGGATATACGGTGATTCAGTGG
GAGATTTCTTTTACCGTGCTGTTTGGAACACTCCATTATGCAAAGTACTC
TTCATAACTTGCAAAAGGACGTATAACTGGGTGTATAATTTGCCGAACAA
TGCGCCACCGCGCCAAACCTCCACCACTCTAACCTATGATAACCGAGATT
TCGATATAGAGCGCCTGGTTCACGAGATTGTGAACGTTATTTCTCATCCA
CCAATGGATGATGAGTCAGCACTTTTACTGAACTTGGGGCTTCATTACGT
CATGGGCATCCCTGTCAATCAATTCATAGAACTGATGAAGAGAGTTGGGG
AGATGCTTCAACAAAACAATCTTTACAACAGTACGATCATCTGGAAAACG
ACCACAGCACTTCAGAAATGGAAATATGGAGCACCTGAATCGAACGCAAG
GCATGCCAAAAGTCATCGCTTTCTCACTCAACAGaGAGTGGAAATCTTCA
ACGCTATTTCAACGAACATCTTGTGTCAAGCTGGTGTGCCAATCTTAGAC
GTTTTCCCAATGAGTTATTCTTATCCTAATGGGACTGGCTCCCTGGCTAA
ACCATGGGATGCTGTACACTACAGCAGGAAAGCGTTCATTCCTGTTGAAC
AATATCTATTCTCATTCTTCAAAAGgaaaacttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029396XLOC_029396Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045993-exon-scaffold_105-1491911889:461258..462074TCONS_00045993-exon-scaffold_105-1491911889:461258..462074Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1510915933:461258..462074TCONS_00045993-exon-scaffold_105-1510915933:461258..462074Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1575043694:461258..462074TCONS_00045993-exon-scaffold_105-1575043694:461258..462074Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1491911889:462482..462607TCONS_00045993-exon-scaffold_105-1491911889:462482..462607Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1510915933:462482..462607TCONS_00045993-exon-scaffold_105-1510915933:462482..462607Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1575043694:462482..462607TCONS_00045993-exon-scaffold_105-1575043694:462482..462607Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1491911889:463222..463329TCONS_00045993-exon-scaffold_105-1491911889:463222..463329Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1510915933:463222..463329TCONS_00045993-exon-scaffold_105-1510915933:463222..463329Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1575043694:463222..463329TCONS_00045993-exon-scaffold_105-1575043694:463222..463329Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1491911889:463675..464183TCONS_00045993-exon-scaffold_105-1491911889:463675..464183Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1510915933:463675..464183TCONS_00045993-exon-scaffold_105-1510915933:463675..464183Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1575043694:463675..464183TCONS_00045993-exon-scaffold_105-1575043694:463675..464183Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1491911889:466260..467146TCONS_00045993-exon-scaffold_105-1491911889:466260..467146Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1510915933:466260..467146TCONS_00045993-exon-scaffold_105-1510915933:466260..467146Clytia hemisphaericaexon
TCONS_00045993-exon-scaffold_105-1575043694:466260..467146TCONS_00045993-exon-scaffold_105-1575043694:466260..467146Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045993-proteinTCONS_00045993-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_105supercontigscaffold_105:461258..467146 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.90229	1.56132	1.6154	1.15929	1.96677	1.31779	6.56262	7.2505	2.84537	1.85441	6.45716	4.43421	4.35424	4.18332	3.82565	7.7383	3.89172	4.22115	1.07868	0.934704	3.61718	4.1723	3.74427	3.73509	3.33593	3.63041	0.804263	0.649548	1.82988	1.81057
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR014756Ig_E-set
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045993 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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