TCONS_00045929 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045929
Unique NameTCONS_00045929
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length125

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045929 ID=TCONS_00045929|Name=TCONS_00045929|organism=Clytia hemisphaerica|type=transcript|length=125bp
GAAAAAGTGGCAAATCAAAATGATGCGTTTGTTTTGGCAGAAGACACGCA
AATATCCGAAGCAACTCAAGATTCGCCAGTTATGAGGCTACCATCACCAA
TTATCAATAGGACTTCCTCAACTGT
Run BLAST on NCBI

transcript from alignment at scaffold_103:44564..44797-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045929 ID=TCONS_00045929|Name=TCONS_00045929|organism=Clytia hemisphaerica|type=transcript|length=234bp|location=Sequence derived from alignment at scaffold_103:44564..44797- (Clytia hemisphaerica)
GAAAAAGTGGCAAATCAAAATGATGCGTTTGTTTTGGCAGAAGACACGCA
AATAGTTAGTGCGCTTTTAAAGAATTACAAATACCAAATTTGAGTAATGT
TTTCTAAAGTCTTTCCCTATTAAAAATTTTCCTTTCATAATAATTTGCAT
TTTTTTCTATCAGTCCGAAGCAACTCAAGATTCGCCAGTTATGAGGCTAC
CATCACCAATTATCAATAGGACTTCCTCAACTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029352XLOC_029352Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045929-exon-scaffold_103-1575043694:44744..44797TCONS_00045929-exon-scaffold_103-1575043694:44744..44797Clytia hemisphaericaexon
TCONS_00045929-exon-scaffold_103-1575043694:44564..44634TCONS_00045929-exon-scaffold_103-1575043694:44564..44634Clytia hemisphaericaexon
TCONS_00045929-exon-scaffold_103-1510915933:44744..44797TCONS_00045929-exon-scaffold_103-1510915933:44744..44797Clytia hemisphaericaexon
TCONS_00045929-exon-scaffold_103-1510915933:44564..44634TCONS_00045929-exon-scaffold_103-1510915933:44564..44634Clytia hemisphaericaexon
TCONS_00045929-exon-scaffold_103-1491911889:44744..44797TCONS_00045929-exon-scaffold_103-1491911889:44744..44797Clytia hemisphaericaexon
TCONS_00045929-exon-scaffold_103-1491911889:44564..44634TCONS_00045929-exon-scaffold_103-1491911889:44564..44634Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_103supercontigscaffold_103:44564..44797 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045929 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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