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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045927 ID=TCONS_00045927|Name=TCONS_00045927|organism=Clytia hemisphaerica|type=transcript|length=201bp
CTGAAATAAAAACAatgaaagaaaaattgaatgctGCTAAAATACCAATC
GAACAAACCAGTGTTAACTCTGATACAGAAAACGACGAGGAGCTACTGAA
TGTCAGCACATTGTCTCCCAACAAAGTGTCATGTGAGAGTAGCGATCATG
TAGCTGAACCTGCCTCACCAAAGAGAACGACGGTGGCTAGACAGACACAA
T Run BLAST on NCBI transcript from alignment at scaffold_103:48601..50182+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045927 ID=TCONS_00045927|Name=TCONS_00045927|organism=Clytia hemisphaerica|type=transcript|length=1582bp|location=Sequence derived from alignment at scaffold_103:48601..50182+ (Clytia hemisphaerica)
CTGAAATAAAAACAGTAATTACATTTTGTAAATTATCTTTGTATAGCTCA
GGTTTTGTTCAAACTTTTATAGTTGAAAGTAGCctcttttttgagttttc
tcCTCTTTTTATATAGCATAAAAGGGTATTTTGTTTCTTCGAATAAGGGA
ATTATACTTGAACAAtagatgtattttgtttttcattggAAACCAAGAAT
TGTTTATTTATcctaaaggtttgtttttttttacttaaagaTATGNtatt
ttgtttttgattggaATTTATcctaaaggtttgttttttttacttaaagA
TATGCATGATTAAAGGACTAGGagtttacttttttttacagatgaaagaa
aaattgaatgctGCTAAAATACCAATCGAACAAACCAGTGAGTTTAacta
tttgttttgaaagtgcaGTTGATGCTCTCTGATTCGATCTTTAAGGTGAA
TTAATAAAATATACTTTGTCAGATGGTTTTTTAAACTCAAAACTGCTTGA
ATTTTTCTCTCTATGTTATATGAATGTTATATACACAAGTATGTAACAAA
TGAATCCAAAAAACTTTACACAACAGTGCATTCACAAGATGATAGACAAT
TAGTATGCATgagttaccttaagggaataaattaatgcgagaaTTTATTA
ATGCGGAATAAGTTAATGCGAGTAACCCCCAAAAAATTATATGTTTtgcg
gaataaattaatgcaaaTAGGCCCATTTTAAGGGGTTTTGAGCAATTGCG
GAATTAGTTTGGGCGCTTTTTAAGTAAGAGAATAATGTCAAATATGGGAA
TACAAGTGCTTAATTTATGCACTGGACTCCAGAAAATGAATATTTGGGAT
TTACACCTCCAAAATCaacaatattttagaaaaaaatgcgGAATTTATTA
ATGCGAATGGCGAATGGCCgaaattttttaagttttgcggaatttaattt
tgcgaaaaaggGCCAAATTTGCATTAATTAATTCTCTCATTAATTTATCC
CCTTAAGGTAACATATAACAATAAAATAATACATTAACATAACATGAGAT
CACTATGACAACATTGAGACACTTTCAAAACATGACAATTGACAATGCTA
CCGACAACTTGATACATTACAACAAAAACGTGCAATTTACAGACCAACAT
TTAACATTGATAATTTACAGAAGAAAGTCACAATATATAAACAAATGCTA
CTATAATGTACGAGACTTAATATATAATGGCTTGGATACTGAAAAGACAA
GCAAaagctgcaaacaaaaaaagagACTGGAAACAAAGGAAAACACTGAC
CAAACAGAAAAACACTGACCAAAtagaaaaacacagaaaaaagctgaaaa
accCAAAAATGGGGAAAACCCCAAACATCCTGAGGAGAACCATAACAGTC
ACTGTGTCTCAGCCACTACAAAAATAGCTATTTTTTTTAAGGTGTTAACT
CTGATACAGAAAACGACGAGGAGCTACTGAATGTCAGCACATTGTCTCCC
AACAAAGTGTCATGTGAGAGTAGCGATCATGTAGCTGAACCTGCCTCACC
AAAGAGAACGACGGTGGCTAGACAGACACAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045927-exon-scaffold_103-1491911889:48601..48614 | TCONS_00045927-exon-scaffold_103-1491911889:48601..48614 | Clytia hemisphaerica | exon |
| TCONS_00045927-exon-scaffold_103-1510915933:48601..48614 | TCONS_00045927-exon-scaffold_103-1510915933:48601..48614 | Clytia hemisphaerica | exon |
| TCONS_00045927-exon-scaffold_103-1575043694:48601..48614 | TCONS_00045927-exon-scaffold_103-1575043694:48601..48614 | Clytia hemisphaerica | exon |
| TCONS_00045927-exon-scaffold_103-1491911889:48942..48987 | TCONS_00045927-exon-scaffold_103-1491911889:48942..48987 | Clytia hemisphaerica | exon |
| TCONS_00045927-exon-scaffold_103-1510915933:48942..48987 | TCONS_00045927-exon-scaffold_103-1510915933:48942..48987 | Clytia hemisphaerica | exon |
| TCONS_00045927-exon-scaffold_103-1575043694:48942..48987 | TCONS_00045927-exon-scaffold_103-1575043694:48942..48987 | Clytia hemisphaerica | exon |
| TCONS_00045927-exon-scaffold_103-1491911889:50042..50182 | TCONS_00045927-exon-scaffold_103-1491911889:50042..50182 | Clytia hemisphaerica | exon |
| TCONS_00045927-exon-scaffold_103-1510915933:50042..50182 | TCONS_00045927-exon-scaffold_103-1510915933:50042..50182 | Clytia hemisphaerica | exon |
| TCONS_00045927-exon-scaffold_103-1575043694:50042..50182 | TCONS_00045927-exon-scaffold_103-1575043694:50042..50182 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_103 | supercontig | scaffold_103:48601..50182 + |
Blast
The following BLAST results are available for this feature:
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