TCONS_00045915 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045915
Unique NameTCONS_00045915
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length97

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045915 ID=TCONS_00045915|Name=TCONS_00045915|organism=Clytia hemisphaerica|type=transcript|length=97bp
tttcatttcatttctcacATCTGGGAAAGCTTTGGAAGCCTATATTTTGA
GTGAAAGCAACAATTTGATTCTGCGAACTGATGTTTTCGAACAGTNN
Run BLAST on NCBI

transcript from alignment at scaffold_102:350058..350154

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045915 ID=TCONS_00045915|Name=TCONS_00045915|organism=Clytia hemisphaerica|type=transcript|length=97bp|location=Sequence derived from alignment at scaffold_102:350058..350154 (Clytia hemisphaerica)
NNACTGTTCGAAAACATCAGTTCGCAGAATCAAATTGTTGCTTTCACTCA
AAATATAGGCTTCCAAAGCTTTCCCAGATgtgagaaatgaaatgaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029338XLOC_029338Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045915-exon-scaffold_102-1491911889:350058..350154TCONS_00045915-exon-scaffold_102-1491911889:350058..350154Clytia hemisphaericaexon
TCONS_00045915-exon-scaffold_102-1510915933:350058..350154TCONS_00045915-exon-scaffold_102-1510915933:350058..350154Clytia hemisphaericaexon
TCONS_00045915-exon-scaffold_102-1575043694:350058..350154TCONS_00045915-exon-scaffold_102-1575043694:350058..350154Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:350058..350154 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045915 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top