TCONS_00045843 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045843
Unique NameTCONS_00045843
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1557

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045843 ID=TCONS_00045843|Name=TCONS_00045843|organism=Clytia hemisphaerica|type=transcript|length=1557bp
CGTGgacgaaaacaaacaaaatggtatCAAAAGTAGTGATGAGAAATTTC
GTAGAGAACTTTTCGTAGTAGAGAACACAGAACTTCCAGGTACTTTCACG
ACGTACTTTCAGACTGAAAGATCACACCTTCATATCGATCATACGTGCTC
CCTCTCAAGagTATGGCGTATGATCCAAGGAGATGGCTAAATTACGACAC
ACTCGATGATCAAAACAATGGAGACCAAAACTATTACCAAAAACAAGAAC
CAGAAGATCAATACAGAAGCTTTGATTACCAACCAACTACCACCTCAAAT
ACATACAAAACACAAGATTTTTATAATCCTACCCCAGATCCAGAAAATAT
TTATACACCATCATTCAATGGTAATGCTTATCAACAGCCAAACAATGGAT
CTATTGTTGAGAAGAAACGAAAAGTTGACGAGTATGACCCAATGGCTCCC
AGTTTTAGTGGCTCCTCTACCAATCAGCCACCCACACCAAAGAAAGAGCA
ACCGGATCCAAGAAAACTCGGCCATTTTATCAGCATGCTTCAAAAGATGA
TTAGGCCTATACCATATGATTACAAGAAGATGCTACCTTATGATATCATT
TGCCAGTTAGCACATGCCATGTTGGATGGAACTGTTTTTGAAATAGCCAA
TGGTTTGAAGGACATTCAAAAAATAACAGAGAAGAGCTTACATGCAAAAA
GAAGCAAGCTTGTCAACGAACATAAAGCTATGAAGCAAGAGATCAAGAAG
CGACACAAAACCGAGATTGAGCATTCACAGTCAAGACCACATCAGATTCT
GGTTTATGAGAAAAAGCATGCTGAAGAGCTGAAGATTTTCAATGAACGAG
TGGATAAAGAACTGACTCAAATGGATCAAAAGATTGTATTGGACTTGGAT
CAACAGATATCGGATCAACAAGTCACTTTGGAGCGTGCCGGGTTACCATT
GTTCTTCATCACCAATAACCCTCAAGAAATTCGTATACAAATGTACATCT
TGGAATTTATTGTCGGACTATCAAATTCTCACACAAAACCATCTTGAGGG
GAGGAGATTCGAAATATTGTGAAGAGAATTCGTTGGAAAGGGCAAAAGTT
GCTGATGTAACCAAAAATATTCTCCTTGGAAGTAACGCTACGTTTGATCG
TTGGGAATATGCTCTGTTGAGGTTGCATTTGGTAATCGAATGAAAGACAC
TTACGAAATGAATATAATAATTCATCACAGAGGCGGTACATCATTCACAA
GAGCTTTGAGAAATCATTATTTTCACGTGCTTTCTAAAACCGGGTTTCCA
CAAACCCCGCGAACGGTTGGGCGCGGTGCGGTGCGATCAAAATTTCCTTT
TATAGCTCATTGACGTCacgaatgaattttttttgtacaCAAAGTGTGAG
CTCTATCGAGCGCAACTGAGCTCTTTTGGgagctgaaaattttcaactcc
CAAAAGCGTTCTCTGCGACCAGAATTTGATGAACCAATCAGAAGAGAGAA
AATCTGCTGATTAAGcaaataaaatatgaaaatgtacAGATTGTGCGTAA
ATCGATA
Run BLAST on NCBI

transcript from alignment at scaffold_102:365026..374214+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045843 ID=TCONS_00045843|Name=TCONS_00045843|organism=Clytia hemisphaerica|type=transcript|length=9189bp|location=Sequence derived from alignment at scaffold_102:365026..374214+ (Clytia hemisphaerica)
CGTGgacgaaaacaaacaaaatggtatCAAAAGTAGTGATGAGAAATTTC
GTAGAGAACTTTTCGTAGTAGAGAACACAGAACTTCCAGGTACTTTCACG
ACGTACTTTCAGACTGAAAGATCACACCTTCATATCGATCATACGTGCTC
CCTCTCAAGGTATGATGATTTAATTTGACCTAATCTGACCTTGTCTTGAG
AATATGTCTCCAATTGGGGTGGCTGGGTTGGTTGTAACATGGGATTGTgt
atagaccttttttcaaagaggccaccctgttgaataattatgtagtccag
cagaaaaacaatgatgaaCCATGAATAATTactacaatatgcatgataca
gtaattatgcatggatatatcattgtttttatggctggactacataatta
ttcaacatgacatcctctttgaaaaaaggtctatttttactttttactgt
TAAATcactttgacaaaaaatttcttttaatacTTCCACCAAATTTATCA
ACCACACTTTTTCTGTCAAAAAATAGATACGGTATATGTCTAGAAGAGCT
GCATCTGACAAAAGTATTCAACCAATTCACGTCATCTTTTAGTTTCGTTA
AAACCTCTGGTTAAACAGTTACATCAATNNagagaacttcataattcccc
aaacaacattacattactatctcaaactcccatcacataaattttacaat
tacgtcagagtagactacgcttgccaccgaagaggtttatttggaaaggg
tagttatattttattgtttgcttcttttttaaagatttgccgggttggaa
aagtatgaatttctttgtacatattttacctaccccaaatatttaggagg
ctgagttttaaacgaatcgtcaagttgaaacgNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNaatgtatcaaggtctgttttatttaccccctggt
gacttaacaaaagaaacttaactcgatgttacaatccaattattgaaagt
ttgtctcggcctttttataatgagcgagacatacgttctctgattacgca
attttcatattgacattttcgaggcattttgatgtaactgttaaACCCCG
TTAAACCCCTCTCTCGCTCAAGGGACTTTTAACTAACAGCCTGTGCAATG
AGATGAATATATGTTAGCAAGAGCCTGGTTTCTAAGATTTAGTTGATGTA
AGTGGAGTGTGTCGTGCCTGTGTTGTGTTCATTACCGTGAGTATGGTCCT
AATCCGAGTATTCCGACACCCCAAATAACTAAAAACTGttataaaaaatt
ctatgtttacaaaccttccttctccaagttgaacgatagaCTATTGCAAt
gactctcgaaacaaaacatctaacattATGGCTATAATAATGTCAaggtc
aattaatgtgatcaaaaaagtgtaggaccctcccggcgctccggaaactT
CCGGAGTTTTCCggagcagctaaaaaaacactatttttctctccgGAAAG
TTCCGGAGCTCTTCCAGCGCTTCCGGAGCAAGTGATTTTAACATGttcta
aaaaaacatttaaacggctagttcgaaacacgggtcacgggtccgggtcc
ggggcacgggttacggggcacAGGTCACGGGGCATGGAGTGATCGGGCAG
CTCtgatcaaagtaattcaaacagaaaatgttttaaaaacgcaaaaaatt
atcgaaaaaatctATTTGAAGGTGTTTTATCCACGAATGACTATAACCAC
GTCCTTTCCACGTGTTTTCGAAGTTGCGTCGTGTacaacgcagaccagaa
aacaccgcaacatattacatacatataaCAAGCTTATATTATCAATAAAT
ACACTTTTAGTGCtatatgcatgttatatgttatacgtaagtaatataca
tattacaattcccaTCGCCTGAAAACCAAGCTTTCTCAAGAAAATAATAG
TCCGCctattgttaaatcatatctcattatatcccctccatcaccttcag
tatgaatataattttaatggataataacgtAAAAATGATGGTATTATAAA
TGTGTCAGTATTTTCCAcctaccattatgaatttttaataaaaatgacgt
aattatactcatatctctaaaaccactatcttgcagcatttaatcgtttt
aaaacatgtcaatctatatccagtcacataattagcatcctattgagtat
gaaaaaatattttgctgtaaattggttcagaggccttatatttcatgatt
ttgacaatatttctgtcattcaatatcattttgtcaaaatttgtgggtga
catattatttaaaaattctcatgataatactattcgtatataattgtttc
agacaTACTATACAATGGTAGTAgtactattatatgtgttatgtagtacg
tgttatgaacgaattatacgtcatgatatcgttttattttttccggtctg
taatttgtatgccCCGTGACAGTCTTTGAGGATGATGGTTCAcccattaa
tgaaattgaatttgtcacattatATTCGAAAGCATagttgaaatttcgaa
aaaataaaaaaaacgtgagGTTTCAGTGAGTCACATGAGTCGGCGCTATC
GTAATAACATTGCGGATATCTTGCTCCAGAACGTTCCGGAGTTCCGGTGC
AGACCAATCGGCAAAAATCGTGCTCCGGAACACGAAAAAAACACCACTTT
TTGCTCAGGACGTTTCCagagcgccgggagggtcctaaaagtgtgagttg
taaaaatgattacctctattattctgaatccagCTGAATCTGTTGCTCAT
GTTTAAGATGTTAACAATTTatgtaatgaaaaattattttttgtataaga
agcacaattattgtaatttggttcaaatcaatgtgtatcaaatctttcag
tttagttgacactttggtatcttcattgcgtcacagtgaaaggtttgttt
ttattttattttgtatctTCCTATCTTTTAAAGACCatcagatttaggca
gggctgttggaTTTAGGATCACTCACGGTATAATAAAGGAAGGCGGACAT
GAATCGCTCAATAAAATTTAGTGCATATATTTAGAAAACCACCCCCGTGT
AAAGTTAACAGATCTGAAAATATGACGCTagattttatggatttttgtaG
ATATCTGGTTTGCAGTACGCGCGTGTTTCACTacggaatttttttcatat
ttcaatttaaaagcctacttggtgtgaaagagaaatcatgCATTTTTTGA
TACGCCGTTCATTGTCGTTCATTTAtattggaggttcggtgaaatggtgg
ccgaattgccatcccatgttttgtcagatagtcccaagttaaagcagttg
acatTAAAAGGGCTAGTtcaaaacgcaggtcacaggtcagtgctgacagg
tcagctttaattactgtaaaacaccaaggaaatgtttgaaaaaaaattgt
caaaaactgtcaaaaatatcattctgaaggtatatattttattgatctag
aacttTTTTAAAGGTCAATCTCTATCCACCATGTGTTTAGTTGTGCTTAC
CACGTGCTTTCGCAATATGTGCTGTGTATAACACAGACCTGTAATACTTA
TTATATTTAATTGTAATTGTATATTACACACATATCACACATAAATagca
gttatcttttcaatgttatgtGCATGTTACATATTTTATACacgtgttaa
aatattattaatcTCACCTTTAACCTCACTTCCcgacaggaaaatagcta
ttttgcAATCGCTATATCATACCTCCTGCAGCACCTTGGGTCTGataaca
aaaattaatgaaaatagcGTCAAAAGggttatattttataaatatttcaa
tatttttatcccctgctttgtCATAGTTTTATAAGGGGGGTACGATGGCC
CTGAAGGCTCAtaatttctcttcaaaaaacAACCGGAGTTTCCCAAAATC
AAGCTGGAGTTTCCCAAATTTTAGACAGAGTTTCCCAAAACCAAGCCAGA
GCTTCCCAGATTAAAAGGGGGTTTCCCAAATTTTAGATGGAGTTTCTCAA
ATACACGGGCTGTAAAATTATATCGAATCAAGtacaatgcagtcaaaaca
tgtgattactcaaaaaagttcacgtgatctTATTCCCATGTTAATTAATT
Gctttacagctgataactttgttaatagtgtcaataaattcgaaccaatc
agaaataaatgtcatgtaacaagcacataaaaatgtagaaactaaaaaaa
atttgggaGACCCCCAGCTTGATTTTGGGAAACTCCGTCTAAAGTTAGAG
AAACTCCGGCTTGGTTTTGAGAAACTCCGTTTAAAATTATTGGGAAACTC
CGTCTAAAATTTGGGAAGCTCTGACTTGGTTTTGGGAAACTCCGTCTAAA
ATTTGGGAAACTCCGGTTGTTTTTCGAAGAGAAATTTTGAACCTTCAGGG
CCATCGTAGGGGGagttttttcttcagaaaatgggaaaagtgtgggcaaa
atttttttcaaaattctaggGTGGGGGGAAACAAAAGTAAGGGGAGAAAA
AATAGCTCCAAAAAGTCTAGGTTGGGGagaaaaaatctgaggaaaaaaat
tttctgttctcTGGTGTCaaacataaaacataaaatatatctGTTCAACT
TCAAGCTAAAAACATGTAATAGTGTTTTATATTTGAGGTGATGacaattt
acattttttctttgtatatagGGACGAGATAACATGAATAGAAGCAGTAT
ATTGGGGCAGANCGAGGTGGTGacaatttacattttttctttgtatatta
TAGGGACGAGATAACATGAATAGAAGCAGTATATATgggacttttttcaa
ttttcaagggagGGGAACCAACCGACTAGGACACTatgtttgtatttttg
atgaaaatgacgtcatcattttcgtatctctaaaacagctgtctaggagc
atttaatgttttcaaaacatatCAATTTGCACTGTTGACCTattgacctg
ttgacctgtgacctgcctTTTGAACTAGCCggaaaacaattgaaattcaa
caacaacATTTTTAGTTCAAGGTGACTCCTGATCTTTGAGCTTTGGATGT
TTAATATCATACATAGGATGGGATCACTGTATTGATATTTTGAATGTATG
TTCTTGACTCTACAGCATTCAAAGCCAACAAacagtaaaaatgaaaaatg
aaaatctaaatttgTAGAAAAGAAATCTCCAACCAAAACCTCCAGTAAAA
TAGTACTTAAAACTGACCATCGTATTCAGCTGCAGTGCAGTTAATAAATA
AAAGATGGATCAAAGCTGTTTTTGAAGCTCAAGAATTTATCTTTCTTTTA
ATATAAACTAGAGGAGTGTACTATatatcttttattttctttagagTATG
GCGTATGATCCAAGGAGATGGCTAAATTACGACACACTCGATGATCAAAA
CAATGGAGACCAAAACTATTACCAAAAACAAGAACCAGAAGATCAATACA
GAAGCTTTGATTACCAACCAACTACCACCTCAAATACATACAAAACACAA
GATTTTTATAATCCTACCCCAGATCCAGAAAATATTTATACACCATCATT
CAATGGTAATGCTTATCAACAGCCAAACAATGGATCTATTGTTGAGAAGA
AACGAAAAGTTGACGAGTATGACCCAATGGCTCCCAGTTTTAGTGGCTCC
TCTACCAATCAGCCACCCACACCAAAGAAAGAGCAACCGGATCCAAGAAA
ACTCGGCCATTTTATCAGCATGCTTCAAAAGATGATTAGGCCTATACCAT
AGTAAGAtcgataaatatttttgttgtcttggtatatatttttatgCTAA
CGTCAGTAACATAGTTTGTTTTGTGTTTGGGATTAATCTTTGCCATATGC
GGCTAAAGATAAACCATTACTCAGAATTTTATGCGTGTTGTGCTTTTGAT
GTTTGAGATATTATGGGGCTCTATTTAAAAAATAGAACAAGATGTACAAA
GGACTCACTGTTGATGAATGTTATTACTTTTCGCTTTGACATTCtcaaaa
atcttttgctttttttaagaatgtttgcaaaaagattttgcaataaaaaa
ttgaaacaaattgTTGATGGTTTTTGGCTTTTTATATGTTCAGTGATTAC
AAGAAGATGCTACCTTATGATATCATTTGCCAGTTAGCACATGCCATGTT
GGATGGAACTGTTTTTGAAATAGCCAATGGTTTGAAGGACATTCAAAAAA
TAACAGAGAAGAGCTTACATGCAAAAAGAAGCAAGCTTGTCAACGAACAT
AAAGGTAAAAACTCATGTCAGGGCCATTCCAAGAAAATGTTAACCCTATT
GTAGTCTATGCCCGATATTGAACCATCTCGTATGAAGCGCTCCTAAAACC
CTCCCTATTGGTGTTTGCAGTTAGTAAAAAAGCGTGAAAGAACGTACCTC
TTCATCTGGAATAGCTACATAGTTGTTGAGCTTTCAAAATCCTTTTCGTA
TTtctttcagttttcattttgtaattaaaaaacgAAATCTAGTACATAAA
CAAATGGAAATTGATTgcgacaatatcatgtatacgaATGTCAAGTATAT
TGTTTATTCACTACCATAAGATGGATCAGAAATGATCAGGGGAACCTTAT
GTTTATGATATTCTCACATTCATGCTCTTTTAAGAGCATTTCTTAAATGG
TTTTcataatatctatttttctcTTTAACTTTTAAGCTATGAAGCAAGAG
ATCAAGAAGCGACACAAAACCGAGATTGAGCATTCACAGTCAAGACCACA
TCAGATTCTGGTTTATGAGAAAAAGCATGCTGAAGAGCTGAAGGTAGGAA
GAAGTGGTCCACTGGTAGCCTCCTAACCGGATTGTTGTGGGTTTGAGCCC
CATGCAAATTAACCATGTAACGAAGTCACCTCTCGCATCACTAACACTGG
CGGGCGGCTGGCTACGGAAAGAACCAACCCTTAGGGTGGATGTGAGTTCA
GTTCCTAAACATAAATCAAGTacataaaatgaaataaaatcagataaaat
aaataaactagGGTAACTCTCCGGAAGCTAAAAATGACTGACTAGATTGA
TAGTAGGAATGCTTTAAtaggattttttgaaatttagtacCCCAGCTCAA
TGTtggtattgtcattttataatggATTATATTGAAACCTACATTTATTT
TGCTACCCACCAACGTTGGTGGAGATAGCTTACTGCATTATATGAAAGTT
TTAAGTATAATTATAAATTAGTGTATTGGAGGGGTGATCCAACATTACTA
GAAAGGCTATGGATATGagattatttttatataaagtcgTAGATCTCTAA
GTCAGTTatttgttttttctgctcaGATTTTCAATGAACGAGTGGATAAA
GAACTGACTCAAATGGATCAAAAGATTGTATTGGACTTGGATCAACAGAT
ATCGGATCAACAAGTCACTTTGGAGGTTCATAGTTTTTTCTGGAAGTCTT
CTTTTAACAGCTCTTATTTTTATTGTATTGTTTAGCGACCGTAGTGNGTC
TTATCTGGAAGTCTTCTTTTAACAGCTCATATTTTTATTGTATGTTTAGC
GAACGTatctcagtggtagagcatccggctagccgggtcataccaaatat
tctcaaaatggtacttaaatcctctctgcttgatgctcagcaattaagag
aaggatcaagggtaagtgaagaaatccagggagaaagagtgacgccctcc
cctacctATACTACAAGCAGGACAATAGTTTTGGTGGTGGAATGAGGTGC
TCTGTGATCAGTAGCGTAGCTAATAGGAATGCCAAATTCGTATTGGAAAA
AGCGAATTGTGTTATAAAAATCTATTCTGCTCAAATTCTGCACaactctt
ggctacgctactacTAACGTCACATGTTCCTAAGATTATTTAGTTTGACC
TGTCTCTGGTTTCTTTTTTCGTCCAAACAGGGAGTGTTGAAATatgtttg
aaataaatatatataattaatatttttgaaactgTTCGCAAAATAGTAGT
GTTTCAGCAAAGAGACGAACTTTTTatccaaaaatccaaatttgccCTCG
TTTgagtacttttttatttttcctgagtaaaaagacaccaaagaTCCTCG
TCTTTCAATTACTCCTAAAACTTGAAGTGTTGTTGCAAAAAACTACTTCa
gtatcaaaattaattttaacgGATTTTTTTTGGGATTGAGTAAATGTCGT
TTAAAATGGAGGCcctcaaaaaagttttgatacATTTCTAGAGAAGTGTG
TTTATATGGATAAACTCTACCCgatcaaaaaaaaaagcaacaaaagaTCG
TTCTTTCTTTTGTATAGCGTGCCGGGTTACCATTGTTCTTCATCACCAAT
AACCCTCAAGAAATTCGTATACAAATGTACATCTTGGAATTTATTGTCGG
ACTATCAAATTCTCACACAAAACCATCTTGAGGGGAGGAGATTCGAAATA
TTGTGAAGAGAATTCGTTGGAAAGGTATTTATCCTTTATTTCGTTTGAGT
TCGTTTTCTTTTATTCTATACATTGGCTCATGACAAATCATGAACAAATT
GAGGCTGTTCATTTGATTGTTAAAATAACTCGGGGAGACAATGATACGAT
ATTGGATTGGATAACATTTAAGGGCAAAAGTTGCTGATGTAACCAAAAAT
ATTCTCCTTGGAAGTAACGCTACGTTTGATCGTTGGGAATATGCTCTGTT
GAGGTTGCATTTGGTAATCGAATGAAAGACACTTACGAAATGAATATAAT
AATTCATCACAGAGGCGGTACATCATTCACAAGAGCTTTGAGAAATCATT
ATTTTCACGTGCTTTCTAAAACCGGGTTTCCACAAACCCCGCGAACGGTT
GGGCGCGGTGCGGTGCGATCAAAATTTCCTTTTATAGCTCATTGACGTCa
cgaatgaattttttttgtacaCAAAGTGTGAGCTCTATCGAGCGCAACTG
AGCTCTTTTGGgagctgaaaattttcaactccCAAAAGCGTTCTCTGCGA
CCAGAATTTGATGAACCAATCAGAAGAGAGAAAATCTGCTGATTAAGcaa
ataaaatatgaaaatgtacAGATTGTGCGTAAATCGATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029302XLOC_029302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045843-exon-scaffold_102-1491911889:365026..365184TCONS_00045843-exon-scaffold_102-1491911889:365026..365184Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1510915933:365026..365184TCONS_00045843-exon-scaffold_102-1510915933:365026..365184Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1575043694:365026..365184TCONS_00045843-exon-scaffold_102-1575043694:365026..365184Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1491911889:370470..370876TCONS_00045843-exon-scaffold_102-1491911889:370470..370876Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1510915933:370470..370876TCONS_00045843-exon-scaffold_102-1510915933:370470..370876Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1575043694:370470..370876TCONS_00045843-exon-scaffold_102-1575043694:370470..370876Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1491911889:371219..371379TCONS_00045843-exon-scaffold_102-1491911889:371219..371379Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1510915933:371219..371379TCONS_00045843-exon-scaffold_102-1510915933:371219..371379Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1575043694:371219..371379TCONS_00045843-exon-scaffold_102-1575043694:371219..371379Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1491911889:371812..371918TCONS_00045843-exon-scaffold_102-1491911889:371812..371918Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1510915933:371812..371918TCONS_00045843-exon-scaffold_102-1510915933:371812..371918Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1575043694:371812..371918TCONS_00045843-exon-scaffold_102-1575043694:371812..371918Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1491911889:372452..372550TCONS_00045843-exon-scaffold_102-1491911889:372452..372550Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1510915933:372452..372550TCONS_00045843-exon-scaffold_102-1510915933:372452..372550Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1575043694:372452..372550TCONS_00045843-exon-scaffold_102-1575043694:372452..372550Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1491911889:373443..373599TCONS_00045843-exon-scaffold_102-1491911889:373443..373599Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1510915933:373443..373599TCONS_00045843-exon-scaffold_102-1510915933:373443..373599Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1575043694:373443..373599TCONS_00045843-exon-scaffold_102-1575043694:373443..373599Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1491911889:373748..374214TCONS_00045843-exon-scaffold_102-1491911889:373748..374214Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1510915933:373748..374214TCONS_00045843-exon-scaffold_102-1510915933:373748..374214Clytia hemisphaericaexon
TCONS_00045843-exon-scaffold_102-1575043694:373748..374214TCONS_00045843-exon-scaffold_102-1575043694:373748..374214Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:365026..374214 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.40148	4.87679	3.7648	2.02483	0.229891	0.0871173	0.271013	0.397236	0	0.166222	0	0.107357	0.175203	0.287363	0.372869	0.826838	0.333675	0.377316	0	0	0	0	0.596234	0.206561	1.55657	1.18905	0	0	0.107828	0
Blast
[Close]
BLAST of TCONS_00045843 vs. Swiss-Prot (Human)
Match: DGCR6 (Protein DGCR6 OS=Homo sapiens GN=DGCR6 PE=1 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 1.151e-35
Identity = 70/162 (43.21%), Postives = 112/162 (69.14%), Query Frame = 1 
Query:  526 FISMLQKMIRPIPYDYKKMLPYDIICQLAHAMLDGTVFEIANGLKDIQKITEKSLHAKRSKLVNEHKAMKQEIKKRHKTEIEHSQSRPHQILVYEKKHAEELKIFNERVDKELTQMDQKIVLDLDQQISDQQVTLERAGLPLFFITNNPQEIRIQMYILEFI 1011
             +S LQ +++ +P  +++ L Y  +  LA A+LDGTVFEI  GL +IQ +TEKSL+ +R +L NEH+ ++Q ++++H+ E + +  RPH + V +     EL+    R+ +E   MDQKIVL+LD++++DQQ TLE+AG+  F++T NPQE+ +QM +LE I
Sbjct:   24 LLSALQSLVKELPSSFQQRLSYTTLSDLALALLDGTVFEIVQGLLEIQHLTEKSLYNQRLRLQNEHRVLRQALRQKHQ-EAQQA-CRPHNLPVLQAAQQRELEAVEHRIREEQRAMDQKIVLELDRKVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELI 183
The following BLAST results are available for this feature:
BLAST of TCONS_00045843 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DGCR61.151e-3543.21Protein DGCR6 OS=Homo sapiens GN=DGCR6 PE=1 SV=3[more]
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