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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045812 ID=TCONS_00045812|Name=TCONS_00045812|organism=Clytia hemisphaerica|type=transcript|length=1458bp
CCACAACTGAAgcctttgttttttattgatttactTGTCTTTAGTATCAC
TTCTTGCACTATCAAGCGGGGTCTCCCAATTCGAAGATACGGGAAACAAA
GTTTCTTTTAGGATTCTGGCAGTGCAGTGCGCATGAGCAAAGTCTCAGTG
GCATAAATGCCACGCTGTTCCAAGATGNGGGAAACAAAGTTTCTTTTAGG
ATTCTGGCAGTGCAGTGCGCATGAGCAAAGTCTCAGTGGCATAAATGCCA
CGCTGTTCCAAGATGGTACCATCTCAGCTCATCTGGTTATCGTGTATACT
TAAGCATTTCCTAATAATCTTATGTTTTCCCTTCATGTATCATTTCCATG
ATGTCGGAAGATCACGCTGAAGTGAACTAACCTTCGGAGGACATTCGGGG
AATCGCCACAACCAAGAAATCAGGCTACCCATATCAAATCTACCGCCTGT
TCTTTCCATTGATGTGCTGCGTCAAGTTTTGACACCTTTAGAATGANGAT
CCCATCATGCAATGTTGTTTTCATGAAGCACATTCTTCACGATTGGGATG
ATGAGGATTGTATCAAGATCATGAAATCTTTACACAAAGCTCTCCCTTCC
GATGGCAAAGTTGTGATTTGCGATGCAATCCTTCCTAAGCCAGGTGTAAC
GAATCCAATTGCTAAGAGTCAAAAAGCTTTGGATATGTTGATGGCGATTA
TCGGTGGTAGAGAGCGTAACCAAGATCAATGGAGAGCCATCTTTGAAGCA
TCTGGCTGGAAGATTGATAGTGTTTTACCTATGACAAGCGGTGGTCCTTT
AACAGGAATTATAACCACTTCCAACTGCAAAGTGTGAAATGTTTCATCCA
AGTCGACAAAATAAGAGCGCTGAATTTTTTGAAGCacggaaaaaattttg
aaaaactagaATGAAATAGATTATGATCTTGGTATTCACGGGTCAAAATC
ATGATAATTGTTATAGGGTTATAGCCTGTATTGGAAAAAATCACTCCTAT
AAACAATTTATTactcgttttttttataaatcttttcttttttcttttga
ttataaTTGTTCACTGTTAAGGCATGAGACACAAGaagttttttcgcgtt
ggtgcaatgcaacatgctccatcccactaACCTGAAAGGGTTTCTAGTGT
CTCTAGCTCTACTccgtttttcttttaaatagcATTCgtgcttctctcac
ttttgtcccagggaaaaaaccagcgtgtcttttgggtatttccctcaatt
tttgtcccatgaaacaaaatagAAACCATAGGACACGCACTTtctttctt
gtgttggtgggtgcaccaacgcgaaaaaaacttctcgtNtacgcactttt
tttcttgtgttggtgggtgcaccaacgcgaaaaaaacttctcgtgttcCC
GAGCCTTTACTTTTAGGAAGAAATTAGTCcatctctttcttcatataata
gacgatat Run BLAST on NCBI protein sequence of TCONS_00045812-protein >TCONS_00045812-protein ID=TCONS_00045812-protein|Name=TCONS_00045812-protein|organism=Clytia hemisphaerica|type=polypeptide|length=114bp
MXIPSCNVVFMKHILHDWDDEDCIKIMKSLHKALPSDGKVVICDAILPKP
GVTNPIAKSQKALDMLMAIIGGRERNQDQWRAIFEASGWKIDSVLPMTSG
GPLTGIITTSNCKV Run BLAST on NCBI transcript from alignment at scaffold_101:10140..11597 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045812 ID=TCONS_00045812|Name=TCONS_00045812|organism=Clytia hemisphaerica|type=transcript|length=1458bp|location=Sequence derived from alignment at scaffold_101:10140..11597 (Clytia hemisphaerica)
atatcgtctattatatgaagaaagagatgGACTAATTTCTTCCTAAAAGT
AAAGGCTCGGgaacacgagaagtttttttcgcgttggtgcacccaccaac
acaagaaaaaaagtgcgtaNacgagaagtttttttcgcgttggtgcaccc
accaacacaagaaagaAAGTGCGTGTCCTATGGTTTctattttgtttcat
gggacaaaaattgagggaaatacccaaaagacacgctggttttttccctg
ggacaaaagtgagagaagcacGAATgctatttaaaagaaaaacggAGTAG
AGCTAGAGACACTAGAAACCCTTTCAGGTtagtgggatggagcatgttgc
attgcaccaacgcgaaaaaacttCTTGTGTCTCATGCCTTAACAGTGAAC
AAttataatcaaaagaaaaaagaaaagatttataaaaaaaacgagtAATA
AATTGTTTATAGGAGTGATTTTTTCCAATACAGGCTATAACCCTATAACA
ATTATCATGATTTTGACCCGTGAATACCAAGATCATAATCTATTTCATtc
tagtttttcaaaattttttccgtGCTTCAAAAAATTCAGCGCTCTTATTT
TGTCGACTTGGATGAAACATTTCACACTTTGCAGTTGGAAGTGGTTATAA
TTCCTGTTAAAGGACCACCGCTTGTCATAGGTAAAACACTATCAATCTTC
CAGCCAGATGCTTCAAAGATGGCTCTCCATTGATCTTGGTTACGCTCTCT
ACCACCGATAATCGCCATCAACATATCCAAAGCTTTTTGACTCTTAGCAA
TTGGATTCGTTACACCTGGCTTAGGAAGGATTGCATCGCAAATCACAACT
TTGCCATCGGAAGGGAGAGCTTTGTGTAAAGATTTCATGATCTTGATACA
ATCCTCATCATCCCAATCGTGAAGAATGTGCTTCATGAAAACAACATTGC
ATGATGGGATCNTCATTCTAAAGGTGTCAAAACTTGACGCAGCACATCAA
TGGAAAGAACAGGCGGTAGATTTGATATGGGTAGCCTGATTTCTTGGTTG
TGGCGATTCCCCGAATGTCCTCCGAAGGTTAGTTCACTTCAGCGTGATCT
TCCGACATCATGGAAATGATACATGAAGGGAAAACATAAGATTATTAGGA
AATGCTTAAGTATACACGATAACCAGATGAGCTGAGATGGTACCATCTTG
GAACAGCGTGGCATTTATGCCACTGAGACTTTGCTCATGCGCACTGCACT
GCCAGAATCCTAAAAGAAACTTTGTTTCCCNCATCTTGGAACAGCGTGGC
ATTTATGCCACTGAGACTTTGCTCATGCGCACTGCACTGCCAGAATCCTA
AAAGAAACTTTGTTTCCCGTATCTTCGAATTGGGAGACCCCGCTTGATAG
TGCAAGAAGTGATACTAAAGACAagtaaatcaataaaaaacaaaggcTTC
AGTTGTGG Coding sequence (CDS) from alignment at scaffold_101:10140..11597 >TCONS_00045812 ID=TCONS_00045812|Name=TCONS_00045812|organism=Clytia hemisphaerica|type=CDS|length=345bp|location=Sequence derived from alignment at scaffold_101:10140..11597 (Clytia hemisphaerica)
TCACACTTTGCAGTTGGAAGTGGTTATAATTCCTGTTAAAGGACCACCGC
TTGTCATAGGTAAAACACTATCAATCTTCCAGCCAGATGCTTCAAAGATG
GCTCTCCATTGATCTTGGTTACGCTCTCTACCACCGATAATCGCCATCAA
CATATCCAAAGCTTTTTGACTCTTAGCAATTGGATTCGTTACACCTGGCT
TAGGAAGGATTGCATCGCAAATCACAACTTTGCCATCGGAAGGGAGAGCT
TTGTGTAAAGATTTCATGATCTTGATACAATCCTCATCATCCCAATCGTG
AAGAATGTGCTTCATGAAAACAACATTGCATGATGGGATCNTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045812-exon-scaffold_101-1491911889:10140..11597 | TCONS_00045812-exon-scaffold_101-1491911889:10140..11597 | Clytia hemisphaerica | exon |
| TCONS_00045812-exon-scaffold_101-1510915933:10140..11597 | TCONS_00045812-exon-scaffold_101-1510915933:10140..11597 | Clytia hemisphaerica | exon |
| TCONS_00045812-exon-scaffold_101-1575043694:10140..11597 | TCONS_00045812-exon-scaffold_101-1575043694:10140..11597 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_101 | supercontig | scaffold_101:10140..11597 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008171 | O-methyltransferase activity |
| GO:0008168 | methyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008168 |
methyltransferase activity |
| molecular_function |
GO:0008171 |
O-methyltransferase activity |
Blast
The following BLAST results are available for this feature:
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