TCONS_00045810 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045810
Unique NameTCONS_00045810
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1203

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045810 ID=TCONS_00045810|Name=TCONS_00045810|organism=Clytia hemisphaerica|type=transcript|length=1203bp
gttAATAATTTagtgagagaaaaaaaaacacatctttAAAAATGGCTGCC
TTACAAAATGCATACAATGCAGTCAAGAGCAAAGCATTGGGAGTGGCAGA
ATACATGACTCCCGTTCTAAAGGAATCAAAGTTTCGTGAAACAGGAGTCA
TAACACCAGAAGAGTTTGTTGCGGCTGGTGATTATCTTGTTCATCATTGT
CCAACTTGGCATTGGGCCGCTGGTGAAGAATCGAAACGAAAATCATATTT
ACCTGCTGATAAGCAATTCTTGACAACTAAAAATGTTCCTTGCTACAAGC
GATGCCACCAGATGGAATATGTGttggaaaatgagaaaattatCGAGGAA
GGAGACGGTGATGGTGGTTGGGTGGATACGCATCATAATGTTGACGTCAG
CAATTTAAATGAACCAGCATCCACTGATGACCAAGAAATGAAGCCAGCGC
CACCAGCAGCGGCGGCACCATCCAATGATGATGACGATGACGAAGATGAA
GATGACGATGATGCAATGGACATGGAAGcttttgaagAAGCTGGCATGTT
AGAAGACGCTGCAACTTTATCCACAACGAATACGACGAAAGACACTATGC
AAGAAGCAGCTGCAAGTACAAAAgatggtattttacagaccagaacgtAC
GATTTGAACGTCACATACGACAAATATTATCAGACGCCACGACTATGGCT
TTTCGGATACAACGAAACTAGAAAGCCACTCACCATAGATCAAATGTATG
ACGATATCAGCCAGGACCACGTGAATAAAACAGTGACGATCGAAGCCCAC
CCTCATTTACCACCACCACCCATGGCGTCTATTCATCCTTGCAAACACGC
GGAGGTAATGAAGAAGATTATTTCCACAGTCCAAGATGGCGGCGGTGATA
TTGGTGTTCATATgtacattcttgtatttttgaaattcgTACAAGCAGTA
ATTCCAACGATCGAGTATGACTATACTCGACATTTTGCTATGTAAACAAC
CATGCACGTACGCCCGCACCACCCACGCGCCTTCTCAAGAAGATAATATA
TAAATTATTCtaatgaaattgtatttttgacaatcgtaaattttttcaac
ttttatttaactaaaaaataataatttttgattttcagttctttttaaaa
tttcatttcattctttCCCGTCTCCGcccttttttttaataatttgataA
AAC
Run BLAST on NCBI

transcript from alignment at scaffold_101:40271..51025-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045810 ID=TCONS_00045810|Name=TCONS_00045810|organism=Clytia hemisphaerica|type=transcript|length=10755bp|location=Sequence derived from alignment at scaffold_101:40271..51025- (Clytia hemisphaerica)
GTTAATAATTTAGTGAGAGAAAAAAAAACACATCTTTAAAAATGGCTGCC
TTACAAAATGCATACAATGCAGTCAAGAGCAAAGCATTGGGAGTGGCAGA
ATACATGACTCCCGTTCTAAAGGTATCCTATTTTTAATAATAAAAATCAA
TTTTAAATAGTGAAAAAATATTGTTTACTATAGTATAAAACATTACTTTA
GAGAAATGAAGAAATTTATCACACATCAATTCTGGAAGTTTTAAAGGATG
CCTTTCAAGATGAGAGTACTGGGTTTTATTAAATGTTTGATTATATAATA
ACATGTCCAATTTTTCAGGAATCAAAGTTTCGTGAAACAGGAGTCATAAC
ACCAGAAGAGGTAAGATACTTTAGGCTGGAAAAGTCCACAATATAGAACT
GCCAAACGCTGCTTATCTTCTGTATTTGCAACACGTAAAAAAAATATTTT
AGTTTTGTTCGATGATGTAGTTCAACCTATATGATCAAATTGAAAGAATT
CACGTTCTTCGATTTGAGTTTATAGGATGTGATCACTCAATAGTATCAGG
GTTTATACTGTATAATAAGGGGAAATCTCATACAGTGCTGTGGCATAGCA
TCAGCCCCCCCCCCTTATTTTTTGGGGGGCTAAGAAATATTTTGGCCCTT
TAAGAACCTGGGGGCTAAAATTACCAAAATATTTGGGGGGACCTAGATTG
TTGGGGGGGAGTTGATGATCTGACTGAGACTCCGGGGGCTGTTCAGCTAA
TTTCGAAAGATCTCTTATCTTACTATTAAATCAAATATAAAAAGCAAAAG
ATTTGTAAACATAAATATTAATACAAGTAAAATTTAGTTTTCATTTATCA
GTCTTACTGTACTCGCATATATAGGGGACCTAGCACGAGGCAATTTGTTG
GGGGGACCATACTTTGTTGGGGGGAGCTAGAAACCTGGCTGAAGCTATGT
GTGGCACTAAAGGCTGTACTCATTTTTACAAACAACAAAAAGAGTTTTTC
ATTATTCAACAATTATAGCAATCTTGTTTTGTTTTTTTTTTCATATCCAT
TCAGTTTGTTGCGGCTGGTGATTATCTTGTTCATCATTGTCCAACTTGGC
ATTGGTAAGACGTTATACCTTTACCTTTCTTGTGTTACTAGCCTGGGTAA
CCTCGTTCAGGGCTTTCCAATGTTTCTATAATTGTGTTAGATCATACCAT
GAATAATTGAAGAAATTCATAGGATTTCTGTCCAACTATCTTCTATTCTA
TACGGCATATGCATTTTGTCCTTATTGGCACTCATCAGCACAGCGTCATG
CCAACATTAATAAACACTAGATTATGGGGATAACTTATTCACTATGGAAA
TAAGTCAAAAAATGTTACTTTGGGAAAAGTACCCTGAATTTTTTATATCA
GAAATAAGGTTTCTTCACTGTATTTATTTTTAACTTTGTAGAAATAGAGT
TGTAAAATAAGGCGAGACCACATAGTTCGCACCCCCCCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGTAGTGACCCCCTTCCGAACTATGGACCAATTTAATTTGTTGTTCC
ACGGACGCGACCGACCCAGCATTTGCTGCAAACGAAAAAATAATAATATT
GAATTTCCTGTGCCACAAATTTCTAATACTAGTCTTTTAAAAAAAGTTGA
ACTGAATCTAGAATCATAAATTCTATGCAAGAAAAGATCTTATTACAAAC
TCCATTAAAGATGAATGATATATTTTCGACCAAAATTATTTGAAAATATT
ACTTAAAGCCTAATTACCTTCCTTGATTAATGAAAATCTTATTTTTATTT
TACCGACCGACCGACTCATATTTTGCTAACAATCTACCCTTAGAACAACA
AATTAAGTTGGTCTCGCCTAACTAGACATTCCTATTTTTTCCCCACTGAC
AATTTTTTTTAGTGGAAACAGTGACATCCGGTTGCCTACTTTTCACTCAA
ACTATTTTGCTTAAGATTTTTGATATGTCCTTTGTCTGGTTTTATTTTTG
TTATTTTTAATTGAAAAAATAAGTGCAAATTATCTACCTATCAAAATACC
ATAATTTAAGTAAAATGTAACACGAATTACATATTACAAATTATTCTTTT
CCTTTTTTCTCAAGGGCCGCTGGTGAAGAATCGAAACGAAAATCATATTT
ACCTGCTGATAAGCAATTCTTGACAACTAAAAATGGTAGGCTCATTCTAA
ATTCCTTAAAAAAAGAAGGCTTTGAAATATCTTTTTTGTTTGTTTAACCA
GACGATCTCAATCGAACGGAATCGACGATCGAACCAGTCGAACCAAATCG
AACGCAATCGACCAATTGAAATTCGATTGTCGAACGCAATCGAATCTCAA
TCGAATATTACCGCAATTTTCAGATTCGATTGATATTCGATTGCGTTCGA
TTGATGTTCGATTGCGTTCGATCGTCGATTCGTTGACCCCCGGATTGTTC
ATCGCATAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGTTCATCGCATAATTTCTACGGAAAATCGAAAGTAATTTCATTCGGCTT
GTGATGTTTGAGAGCTTGGATGTTGGGAAGCTGCAAGAATAAAGCCAGAC
GATCTCACTCGAACGGAATCGACGATCGAACCAGTCGTACAACAATCGAA
CCAATCGTATATTACCCAGAATTTTGACGTTCGATTGTGTTCGACAATCG
AATTTCAATCGGTCGATTGCGTTCGATTTGGTTCGACTGGTTCGATCGTC
GATTCCGTTCGATTTAGATCGTCTGGGTTTAATCAACTAAATAAGAGAAT
ATTTTTACGTTGTCAACTATGAAAAAGACTGTCGATTAAAAGATCTCAAA
ATACAAGAGGCTTTATTGTTGGCTTCATAGCTTGGCTATAAAAAAGACCA
TTATCTTGTTGTACCTTCTAGGCATTTAAATCAAACGCCAATTCTTCTAT
AATCCTTTAGACCGTTGTTTTGGTTTCACCAAATAGTAGAATACTGTTGA
CTCTCTCCAATAATTCGATCTTCCAGAGGAGTTGGATTTTCATCGAATGA
TAAAGCTTATCGAATAGCAGAATGCTGAATTGGAGCGTCAGCTGTATCTT
TTGTCCCTGTATTTTTTTATCAAGAATCGACGAAGTAATAAAAAAAATTC
TCGGTTTTCAGTCTCATGTAGCAAGTGTTGGCGCAAAAAATGGAGTATAC
TTTACTCTCGCTAATTCGAAGTCGAACGGGGAATCTAATTTGTTCGAATT
ACAGAAAGATTTGACTGATAAAAAGTATTTTACGAGGGTTTCCCTTTGTC
GGGAAAATGAATTGTGAATTAGTTCAAATTATAGCAAGGTTCGAGTGATA
GAAGTTTGAGTACAAATTAGCGAGAGTCCACTTGTATAAGTGTTATGCTT
TGGGCCAAACATGAAACCTTTCAAACTTATCACGACTTTTTCTCAATTCA
GTTCCTTGCTACAAGCGATGCCACCAGATGGAATATGTGTTGGAAAATGA
GAAAATTATCGAGGAAGGAGACGGTGATGGTGGTTGGGTGGATACGCATC
ATAATGTTGACGTCAGCAATTTAAATGAACCAGCATCCACTGATGACCAA
GAAATGAAGGTTTGTTAATTTACGCATAGTTTGTGAATCTTTTTGATTTT
TTTCTTGGTAAAATTGCGAGTGTTTGGTTTAAGCAAATAAACTGTTTTTT
AAAGTCTCTTTGACAAAATCTGAAGGCTCATTTTTCCAGAGGAAATCTTT
GTCAAATGTATTGGTCTTTAAATGAAATTCCTCAAATCTACAAGGACTGT
CACATCAATACGTGGTAACTAAACTACCCTTTTTCCCCTTAAGGTATCAG
TTTTCTAAAAACTGCCATCAAAGGTTGCGGACATAGCTTGGTCTAAGTCA
TATAAAGGTCAGTTGCAGTATTTGAAATTCTGGAGCTTTTATCTATTCTT
TCAGCCAGCGCCACCAGCAGCGGCGGCACCATCCAATGATGATGACGATG
ACGAAGATGAAGATGACGATGATGCAATGGACATGGAAGGTAAAAGTCTT
CACTCAAAAGTCTTTTCATTCTGTCTGGTTCATCGAGGCATGATTGAGGA
AGTTTCTCTTCAAATATTTCTTGATTCTCGCTGGCTGATCGAGGCATATG
CGAAAAATTTCTCATCAAATCTTGATTAATTCTGTCTGGTTGGTTGGTTG
ATCAAGGAGTTGAGGAGAAGGTTTCTCGTCCTGTCTTGTCTAATGTTTAT
TAAAACTTACTCGTCCGAGCTTTCGGTCAAACTGTATTGGTTGGCGAAGA
CAACGGTTTTTATGCAGTCAAATGCTTCTTTCAGGATTACAGTAATGTGT
GTGGTCAAAAAATTATTTTTTAAATGTGACTATAAAACTTCTTTAGCTGG
TGTACTATTTCATTAAAACCGCTTGAGACTTTAAAAATGCCCTATTTTTA
TTTCAAGTACTTTCTTGTTTTAGCTTTTGAAGAAGCTGGCATGTTAGAAG
ACGCTGTAAGTGATGATTTTGTTTTCTAAAATCTAATTTAAAGGTTTTGT
TTTTAAATAAGAGTGATATCGTTTACTTACTCAACAATTTTAATTCACAA
GCTTTTTTTCACATTGACACGAATGTGGAGCAAGTTTGGTCAGAAAGAGG
AAAAGAAAAACATTTATTGTTTATATCAGCATAATCTAACAATAGGGAGA
CACTGTCCCGATATGAAATATATGTCTGATATGAAACGTGAACACTTATG
TAAAAATAAAACCTTTAATCCCCGAAACCAAGAGCCTCTTTGAAATTATT
ACCACAGCTCCGGCAGCCTGGAGGTCCATGTCATGATTTCTTCTTTTATA
TACTGATACCGAAATGAAAGGCAAGAGTTTGAACTTTTCCAGCTTCAAAT
GACAAATGAAAACATAGCCAATCAAATTTTGCTTTTATTTCACTGGTCAC
ACACAAAAACTGGACTTTCTAAACTTGTTCTACAGCATTTAATTCGAATT
TCACACCAAATTTTTTAATGCAAAAATCTGCCTCATAGGTCAAACCCGTT
CTGTTTATATCATATTATAAAAATACATGACGGGTCTCCTGTCTAAAGTC
CGTTCAAAAAGATATTGAAATTTTTAGTAAGAGTTTATTTTAGGAATTGA
CGACGGTTTATAAACGGTTCTTTCCTTTTCACACCAGGCAACTTTATCCA
CAACGAATACGACGAAAGACACTATGCAAGAAGCAGCTGCAAGTACAAAA
GATGGTATTTTACAGACCAGAACGTACGATTTGAACGTCACATACGACAA
ATATTATCAGACGCCACGACTATGGCTTTTCGGATACAACGAAGTACGTT
TTTATTGATTTCATATTTTAGAGCATCAAATTGCTTTTTATTTCCTTTGT
TTTTCGATACGAACACTTTTTGATACTAACCACCTAGAGCAAAATACTTC
AACCTAGCTGACGTTTACAATATGATATATAATATTTAATTGTATGAGGA
AATATGCGAGGGTAATTATCGGCTTGTAAGCTTGGGTATTCAACGGTTTT
CTCTCGCGCCCTAGCAGTGTTCTAGAAATACCGGGAATAATGTAGATGTG
CCCGCTCAAAATATCCCCATTAGCGAAGTTAAGCACGGGTTTATTTTGAC
CGTAAAGTGCGATACCGTAGGCCTGTTCATAACTTGCCAAAGCAAAACAT
GCAAGTGAAATCTTATGTACAGGCCTACGATATCGCATTGAACGGTCTAA
ATAAACACTTACTTAACCTCGCTATTGTAGAAGACGAAAACTTAAAATTA
TTTACTCCGGAAGCAAAGCTGATATCTTTGAGCAGGATTTGGTACCAATA
GCCTGTCGAATAAAGGCTGCAAAACTACCATAGGCTGGCTTCAAGTTTTC
CCATTACGAATGACTTCAAATGTTAAAATACATCTGAGATTTTTTTGACG
TAAAATGTTTTTAGATGTATTGGCTTCTTGTTTTATAATCATTGCTTTCC
CTAATCATCCATTCGTAAGTGTTCACACTCGCATGACCATCACTGAAAAA
TAAGTACAGCAAAACAATCGATAGTGTAGACCTTTATAGTTCACATATAC
AATGAAACTTTCTCGATAGAGGATGCGAAGAAATCTTGACAGTCGAAACA
CTACGACTTTGAATTCCCTTGCACTTTAAGTATCTTCCCTAATTTGATAT
TTCTGTTTTCATTTAGACTAGAAAGCCACTCACCATAGATCAAATGTATG
ACGATATCAGCCAGGTGAGAAAAGGATTCTAATTTTGAACATGTTTTTTT
GTATAGGAATACCGGTTGACGTTCTTCAAAATGGTCGTCAGCTACCAATA
TGAAATGACCAATTATCATTAAGAAATTGATAAATTCTTCCGATGATTAC
GAAAACAATACTTTTTTGTTTACACTTTCTTTGGGGTGTAGGCGTAATAG
AAAACAATTTTATAGAAAGATACGAATAAGCGAGAGTTGACTGTAACAGG
TAAAATCAGGACTCGTATATACATATCTCCTGTTACCTTTAATATTACAT
TTCTTCTCCAGGACCACGTGAATAAAACAGTGACGATCGAAGCCCACCCT
CATTTACCACCACCACCCATGGCGTCTATTCATCCTTGCAAGTATGCAGT
TTTTCACACCCTCGCTTGTAATCTTTTTCTTAGACTGAATCTAGTGATTC
TGGTTAAAAATAAATTAATCGCACGACTATGAAATTTCCACAGATATCGA
GTTTGAAATTCATGGTCCTGGCAGAAGAAAAATTCAAAAGCGGAATTTTT
AATACCGTGATTTTTTAATTAAGAATTCAAGGTGGCTCCTAGAGTCACCT
TGGTTTCGAAAATTTTGTACAATTAATAGGCGGTAAAACGTTTAGAAACT
AAGAATTTTGTGTAAGAATTTTCGTTTTCGGTTAGCCCTCCCTCCCTCCC
TATCTGTCGGCGTGGAAAAAAACTATATAGCAGATCATCCATCCTGCGCA
TACAATGCTTGGCTCTAAAGGGATATGGCGAGTGTGATGATCGGACTTGG
TTGGTCAGTCGAAACATTATTCAAAACCGCGTACCTTTTTCCTTGAAAAC
GAAAGTGAAAGCGCTTTTAAGCGCGTTTAAGCGCGTTTAAGCGCGTTTAA
GCGCGTTTAATGTTTTATGATTAAGATTATGATAAGACTAGTAAACTAGT
CGGTTATTACTTATAACCTTATAATAAAACTGTCAATCAAATAATGTAAA
CACTAATAAAATATTCAGCGCGCATGAGAGAAAAGGAAAATAACCGACTA
GAAGCTACTTCCAAGGCCTTTTTTTCTTCACCTAAAATCGTAAGGAGAGA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTGCATTTATTTTTCTTTCTGTTTATTGCGTTTT
TGGAAATGCTCATTTATTAATATGTTCCCATGTTTAATGTTACTATGAAA
TATCATTTAGTCAAAAAAGTAGTATGGATTCTCAAAAACCTAAAAAAAGT
TGTATAATTAAACAACGTTTTTTGAGGGAAGAAGCTTCCAGTCGTTGAAA
TTCAGAAAAGAGACGCAAACTTCACCTCTTCGATTCTTTTTATTTGGAGC
TTAATTTTTGTATATGGGTCTGTTTTCAACGACTAGTTTACTAGTCTAGA
TTATGATTGGCGCTTGATTTTGGTGCGACTGTTTTGCTTTAGCCAATCAC
CGCACTCAAAAGCTCATTTGATATTCATCCCAAATCTGGATAAAAAAGAT
CAAAGCGGTACTAGGGTAGGGTAGATTATCTTAAGGAGCTTTTTGAGTGA
ATCTGTGTCGGAGTTATCAGCCTCTCCTTGGAGTTTAGAAGAAATAAACG
GAAGGATTCCAATGGATCTTTCCTTTCTTTGCATTCTGATAAACATGGCA
ACATCTATATAAGCCTGGCAAAAAAAGGGCGACGCGGAACAAAGTGCAAT
ATGTTCTTAATATTTCAATCGCATACGTGGGATTTGCCGGGGTAGAATGT
AATTGGCAAGAATAAGTTTTTTGTTTAGTCATTCGCCGGTGTAAAAAAAA
GTTAAACCCCAAATGAAACATATCTGAATTTTAGCTTTTGTTTGTGTTTT
TAGACACGCGGAGGTAATGAAGAAGATTATTTCCACAGTCCAAGATGGCG
GCGGTGATATTGGTGTTCATATGTGAGTTTTGTTTTAAATTTTATAGTCG
CACAGTCGGCCATACCTTACCCTTTAACTGCCGATGACGGCACATATGCC
GATATGGACGCTTTCGATTTCTTTGCCAATGTCGGCATTTGCCGGCATGA
GCACTTTCCATTTCTTTGCCGCCGTTTTTTTTAAGTTGAATTTGAACTAC
TGTAGATTTCATTAAATAGAACAGTTGAATAATTAAAATATATTTCAAAG
ATGTTTTTCATAATTATACATTTTTCAACTCAAAGTCAACACATATCACT
TATATTTCTGATATTTCTCAGGAAATAAAGAATTATTTGTACAGCATTCT
GCTGTTGTTTTTGCTGAAACACTAATTCTTTCTATCACTCGTTGTCGGAC
AAAATCTGTTTTGGAAAACTAATGCAACCGTCAAATGTATTGTCCGACTT
TTTTGAGGTCGGACTAGACAGTGTCGGACTTCTGAAAACTCCCCGATTTG
ATATCCTGGAAAGTTACTTTTTTTATATAATTTTTTAATTCTTATGGTCT
CTTATGTAGACTGCCTCTGACCAGACGAAAAAGGTTTTCTGTTTTAGGTT
TTTCGAAAATTATTATTTTGAAAGGTCAAAGAGCTCAGAAAAAACTCCAA
ATATTAAGAAATCGTAAAAATTCAAACTAAACCAGAATGCTCAGAAAAAA
CATAAAACGCCTTCGCCTCCTCAGTCTTTTTAATGTTTTTTTTTGGGGGG
CGGGGGAGCAACTGCCAATCTGACGCCATGTGACACATTAATTTACGTTT
TGTATTTCAATTGAAATCTGAAACCGCTCTCCTGTTTTTTTTTTCACAGG
TACATTCTTGTATTTTTGAAATTCGTACAAGCAGTAATTCCAACGATCGA
GTATGACTATACTCGACATTTTGCTATGTAAACAACCATGCACGTACGCC
CGCACCACCCACGCGCCTTCTCAAGAAGATAATATATAAATTATTCTAAT
GAAATTGTATTTTTGACAATCGTAAATTTTTTCAACTTTTATTTAACTAA
AAAATAATAATTTTTGATTTTCAGTTCTTTTTAAAATTTCATTTCATTCT
TTCCCGTCTCCGCCCTTTTTTTTAATAATTTGATAAAACTGTCAATATAT
CATGACATTTTGAATTTATTACATGCTTTTTGATGATCCATTTTGGATAA
ATTTTTTCAGCTTTTATTTAACTAAAAAATAATAATTTTTGATTTTCAGT
TCTTTTTAAAATTTCATTTCATGCTTTACCGTCTCCGCGCTTTTTTTTAA
TAATTTGATAAAACTGTCAATATATCATGACATTTTGAATTTATTACATG
ATTTTTGATGATCCAATTTGGGACNACACGGCCAATTTTCGTTCTGTTTA
CTTGATATTTTTCGTGCAAATTTACATGGGATCAAAGCTAAAGCTAAGCA
AAAATTTAATTCGAAACCCGTGTATTGAAATCTGAAACCGCTCTCCTGTT
TTTTTTTTTTCACAGGTACATTCTTGTATTTTTGAAATTCGTACAAGCAG
TAATTCCAACGATCGAGTATGACTATACTCGACATTTTGCTATGTAAACA
ACCATGCACGTACGCCCGCACCACCCACGCGCCTTCTCAAGAAGATAATA
TATAAATTATTCTAATGAAATTGTATTTTTGACAATCGTAAATTTTTTCA
ACTTTTATTTAACTAAAAAATAATAATTTTTGATTTTCAGTTCTTTTTAA
AATTTCATTTCATTCTTTCCCGTCTCCGCCCTTTTTTTTAATAATTTGAT
AAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029283XLOC_029283Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045810-exon-scaffold_101-1575043694:50904..51025TCONS_00045810-exon-scaffold_101-1575043694:50904..51025Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1575043694:50666..50707TCONS_00045810-exon-scaffold_101-1575043694:50666..50707Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1575043694:49922..49971TCONS_00045810-exon-scaffold_101-1575043694:49922..49971Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1575043694:48191..48261TCONS_00045810-exon-scaffold_101-1575043694:48191..48261Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1575043694:46767..46924TCONS_00045810-exon-scaffold_101-1575043694:46767..46924Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1575043694:46337..46421TCONS_00045810-exon-scaffold_101-1575043694:46337..46421Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1575043694:45871..45902TCONS_00045810-exon-scaffold_101-1575043694:45871..45902Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1575043694:45033..45188TCONS_00045810-exon-scaffold_101-1575043694:45033..45188Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1575043694:44112..44159TCONS_00045810-exon-scaffold_101-1575043694:44112..44159Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1575043694:43735..43814TCONS_00045810-exon-scaffold_101-1575043694:43735..43814Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1575043694:42054..42122TCONS_00045810-exon-scaffold_101-1575043694:42054..42122Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1575043694:40271..40560TCONS_00045810-exon-scaffold_101-1575043694:40271..40560Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1510915933:50904..51025TCONS_00045810-exon-scaffold_101-1510915933:50904..51025Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1510915933:50666..50707TCONS_00045810-exon-scaffold_101-1510915933:50666..50707Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1510915933:49922..49971TCONS_00045810-exon-scaffold_101-1510915933:49922..49971Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1510915933:48191..48261TCONS_00045810-exon-scaffold_101-1510915933:48191..48261Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1510915933:46767..46924TCONS_00045810-exon-scaffold_101-1510915933:46767..46924Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1510915933:46337..46421TCONS_00045810-exon-scaffold_101-1510915933:46337..46421Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1510915933:45871..45902TCONS_00045810-exon-scaffold_101-1510915933:45871..45902Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1510915933:45033..45188TCONS_00045810-exon-scaffold_101-1510915933:45033..45188Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1510915933:44112..44159TCONS_00045810-exon-scaffold_101-1510915933:44112..44159Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1510915933:43735..43814TCONS_00045810-exon-scaffold_101-1510915933:43735..43814Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1510915933:42054..42122TCONS_00045810-exon-scaffold_101-1510915933:42054..42122Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1510915933:40271..40560TCONS_00045810-exon-scaffold_101-1510915933:40271..40560Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1491911889:50904..51025TCONS_00045810-exon-scaffold_101-1491911889:50904..51025Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1491911889:50666..50707TCONS_00045810-exon-scaffold_101-1491911889:50666..50707Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1491911889:49922..49971TCONS_00045810-exon-scaffold_101-1491911889:49922..49971Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1491911889:48191..48261TCONS_00045810-exon-scaffold_101-1491911889:48191..48261Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1491911889:46767..46924TCONS_00045810-exon-scaffold_101-1491911889:46767..46924Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1491911889:46337..46421TCONS_00045810-exon-scaffold_101-1491911889:46337..46421Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1491911889:45871..45902TCONS_00045810-exon-scaffold_101-1491911889:45871..45902Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1491911889:45033..45188TCONS_00045810-exon-scaffold_101-1491911889:45033..45188Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1491911889:44112..44159TCONS_00045810-exon-scaffold_101-1491911889:44112..44159Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1491911889:43735..43814TCONS_00045810-exon-scaffold_101-1491911889:43735..43814Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1491911889:42054..42122TCONS_00045810-exon-scaffold_101-1491911889:42054..42122Clytia hemisphaericaexon
TCONS_00045810-exon-scaffold_101-1491911889:40271..40560TCONS_00045810-exon-scaffold_101-1491911889:40271..40560Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_101supercontigscaffold_101:40271..51025 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
317.77	301.847	364.122	328.293	100.475	73.561	77.1859	94.335	93.9667	110.096	94.04	68.0534	65.5988	53.7613	82.8859	84.0868	100.071	84.2132	68.2564	84.0568	58.7082	64.7099	124.741	123.839	40.9851	54.7984	75.3897	64.0125	108.129	104.248
Blast
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BLAST of TCONS_00045810 vs. Swiss-Prot (Human)
Match: ATG3 (Ubiquitin-like-conjugating enzyme ATG3 OS=Homo sapiens GN=ATG3 PE=1 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 2.053e-132
Identity = 201/314 (64.01%), Postives = 237/314 (75.48%), Query Frame = 3 
Query:   51 LQNAYNAVKSKALGVAEYMTPVLKESKFRETGVITPEEFVAAGDYLVHHCPTWHWAAGEESKRKSYLPADKQFLTTKNVPCYKRCHQMEYVLENEKXXXXXXXXXXWVDTHHNVDVSNLNEPASTDDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEDAATLSTTNTTKDTMQEAAASTKDGILQTRTYDLNVTYDKYYQTPRLWLFGYNETRKPLTIDQMYDDISQDHVNKTVTIEAHPHLPPPPMASIHPCKHAEVMKKIISTVQDGGGDIGVHMYILVFLKFVQAVIPTIEYDYTRHFAM 992
            +QN  N VK KAL VAEY+TPVLKESKF+ETGVITPEEFVAAGD+LVHHCPTW WA GEE K K+YLP  KQFL TKNVPCYKRC QMEY  E E IIEE DGDGGWVDT+HN  ++ + E       E K         +  ++++++++ + A   E  E   +  D ATL T    +    +  A  +D ILQTRTYDL +TYDKYYQTPRLWLFGY+E R+PLT++ MY+DISQDHV KTVTIE HPHLPPPPM S+HPC+HAEVMKKII TV +GGG++GVHMY+L+FLKFVQAVIPTIEYDYTRHF M
Sbjct:    1 MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLENKDNIRLQDCSALCEEEEDEDEGEAADMEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314
The following BLAST results are available for this feature:
BLAST of TCONS_00045810 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATG32.053e-13264.01Ubiquitin-like-conjugating enzyme ATG3 OS=Homo sap... [more]
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