TCONS_00045553 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045553
Unique NameTCONS_00045553
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2733

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045553 ID=TCONS_00045553|Name=TCONS_00045553|organism=Clytia hemisphaerica|type=transcript|length=2733bp
GCAACTCGTTTGCTTAtatataaagaaaaaatgtgtaaaGGTTTGCTTGA
TTCATCtaagatattttttttccagcaacaaataagaaaatgtattaata
aaaagtcaattcaaaaaacttaaaagcGCAGCAAATATGGAAACGAAAGG
TTACAGCTTCAAGCTTTCTGGACAAGATGTCAGTGAATTTCGCTGTAACA
TTTGCAAATTACTTTTACGAGAAGCAACTGAACTACCATGCACACATATG
TTTTGTCAAGCTTGTCTGTGGGAATGGCACATGGATCCAAAATCGAAGGC
TGGCGAGTCTTTGGATGAACAGACTGATTTTTATGAATGTCCCGATTGTC
ATCAAAGTTATTCTATCGAGCAGATTCGTCGAAGTGCAGTCACCGATAAA
GTCATCACAACTTCATTGATGGTTAAATGTCATTTCTCAAAATATGGGTG
CTCTTGGACAGGACATATCGTACAATTTCAGGAGCACAAGCTTAAATGTG
ATTTCACACCGGCTAGTTGTCCTTTTCAAGGATGTTACAAAGTCTTGAAT
CGGGGACAActcaaaaaacacaaaaagaatTGTCAACATCGATTTGCAAC
TTGTACCGAATGTGGCAAAAAATATGAAACTAAAGATGGTCACTCGTGTA
AGATTGAATGTCCCAACGATGGATGTTATGTTCAAGTTCCCGAGGATGAG
ATGGGAGCTCATCGTGATCGATGTCCGAAAGAATTGGTGAAATGTGGATA
TGTTATGCATAAATACTATTCTAGTGCCCCAAagTTCCGAAGGGAAGATC
TTTTGAGCCATTGCAAAGAGTGCAAAGAAGGCAAAATGGTGGAACTTCTC
AAAGGCAACGAGTGCAGGAAGATGAAATCAAGGATTTGGGAACTGGAACG
GAAAATTGCTCAACTACCCACTACTATCAAGGATTATGACGATGATATTg
agaatttcgaaaaagaaattgaagatttaCCACCTAAGCTGAAACAAATC
CAAACGCTTCAAGAAGCAAAAGAGATGGATGGTCAACCCACAAGTCTACC
TGTCGAAAAtttccaTAGTGATCTCGCGACTCAAGAAAAACTAACAGAGA
ACTTGGTAAGATTTATCAAATCTGACAATATCTTGGAGCTTGTGACAACG
ATCAATCAACATCCCGAAATTAAACCGAACGTTAGTGATTTAATCAACAA
CTCGATCTGGTCCAAAAGTAATAAATGTCTGGTATTTGTTTTGACAaggT
ATTCTAATGAGCtcactgaaaatgaaatgaaagaacATTGGACGAAAGCT
ATAACATCTAATCGAGAGGGAATACACCCGTCAATACCTATCTTACTAAA
GTTTTATCCAAACCTTTTGAATATCAGAATTGTCACAAATGATCAAAGTG
GATCTGCAATTAACATATCATTTTTCGCAAAACAGCCCGAATTATTTGAA
TATTTGATTAATCAACCTGgcattgactttgattttgcGGAGTATAAAAC
ACTTCAGGAAATGGTCAAGCTAATCCCAGAATTACACAATTGCAAGCact
taatcaaaagaaaaaaGAAAATCTTCAAAGAAGGTGGATTCTTCAGTTTT
TTCTAAAGCCAACATTTTCTTCGACACGATTGGACGAAGAAATGTTTTCA
AGAACAACGACTTGAACAATTATGTCTCTTGGAAGTAGTCTGAGTCTGTG
TTTGAATTCAAGCTCATTTTTAGTAGCAAAAATCGTCCCTCTTGCGTCTA
TGATGTCCAGGTTACGTTCTTTCAACCTTCAAAACAGCGGTGTGTACCTT
TTCGGATATAACATTAAGATTGCTTTAAATATATTCGGTCATATACAAAT
TATAAAGATAATGGAATCAAGTACTGCCACGATATAAAAGAACGTTCGGT
CAGCTCCACAATCGCTTCATGGTCCTAGATCTTTTGTTACAATTTTGTCC
TAGGTGTGGGGGACACTCGAGGTAAATAACCTACCATACGTGCGGCTttt
aagggtatattttccaTGCTTCCCAAAGTGAAACCAGCAAAGTTGAAAGA
AAgggcactctaagggtgtaaaatttcgaaaatctgaccatattttgcct
gaaaatggtcaaaaattctcaagaaatacaccgtaagggtcgatttttcg
cttaaatttgctcaaattttgtaaaattttctctgcactgtaggGTCCGA
TTTCTAATCTAAAATCTACTTTTGGTATaattatttgtaaaaatatatat
tttgtaaATAGGCGAANCGATTTCTAATCTAAAATCTATTTTTGGTATaa
ttatttgtaaaaatatatattttgtaaataggcgaatatttttcatttat
atttttgaatttatgaATAATTTCTCTGGTCACATTGGAATTCTACattc
ttgaaatatttgctGTCGAAAGATACGAGTTTAAAATTCTGAAGATTCCC
TTCGACTTTTAATGCACAAttaaagtcttatttttatagcaaaagatagc
aaaaaaaaagaagaacaaaaacagcaaaatcaaaaaactgaaaaaaatgg
AAGCGAAAAGTTACAGATTCGAGCTTGTTGGACAAGATGTCAGTGAATTT
CGCTGTAAcatttgcgaattgtttttacGAGAAGCAACCGAACTACCATG
CTCACATATGTTTTGTCAAGCCTATCTGTGGGAATGGTACATTGGACTAA
AATCGAAAGAAAGGCGGCCGTTGGAGATGTTAT
Run BLAST on NCBI

transcript from alignment at scaffold_1:24961..38800+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045553 ID=TCONS_00045553|Name=TCONS_00045553|organism=Clytia hemisphaerica|type=transcript|length=13840bp|location=Sequence derived from alignment at scaffold_1:24961..38800+ (Clytia hemisphaerica)
GCAACTCGTTTGCTTAtatataaagaaaaaatgtgtaaaGGTTTGCTTGA
TTCATCtaagatattttttttccagcaacaaataagaaaatgtattaata
aaaagtcaattcaaaaaacttaaaagcGCAGCAAATATGGAAACGAAAGG
TTACAGCTTCAAGCTTTCTGGACAAGATGTCAGTGAATTTCGCTGTAACA
TTTGCAAATTACTTTTACGAGAAGCAACTGAACTACCATGCACACATATG
TTTTGTCAAGCTTGTCTGTGGGAATGGCACATGGATCCAAAATCGAAGTA
AGAAAAATCTGAAACTCAAAATCAGCCTCTTGTGCAGTCTGCCATCTGGG
CAATAAGGCAATGTGTAATACTAGTAATGTGCAAGCATAACAAAAAAATC
TCTAAGAGTTGTAAAAAActaataccttattggtattaaaTTTCATGGGT
TATAAAATTTCGCAATGcgtgaaattttttcaaggaaacttgtttcgcgt
gtattaaattttgtGATTCACTACTGTAAATTGGGCATTCTCAAAAAGTG
GGAATaagcaagaaaatgactgatttcgCTCAAAAAACAACTATTGGgtg
taaaataccaaaaatataGTAACAAAGCTAGTGACAAAATAGTAACTaag
tattttcgattttcagcctattttgaaatttttttgcgttatagcaattt
tgtatttttgaaaaatttaaatggtATAAATTTCGCCAAATTTTACCTAA
AAAATCAACTAAATTAAGTACCCGCAAAATTTTGTAacccgcaaaattta
ataccaATAAGGTTCCAATATCTATAATGAttcaaaaatgataaaactAA
AAACCTCTGACATCAAAGGCTTTCCCAATGTACTTTAGAGGATAAAATGA
TTAAAGGCCAAAATGATTTGAGTGGTTTTAGGCCAATAAAATTATTTCCT
GTTATTTTAGGGCTGGCGAGTCTTTGGATGAACAGACTGATTTTTATGAA
TGTCCCGATTGTCATCAAAGTTATTCTATCGAGCAGGTTGGTTATAATTT
ATAGTTTATATCTACCTGGTAAAGGAAAAGCTCaattaaatttaaaagaa
aatgctCATCTGTCTTTCAAGAGCATTAAAACATTAACTATGACCCCTTT
TTTCGAAAtcaaatactttaatgggataaactttcgcaggGATTGAATTT
CGTGGGGACTTAATTTTGGGGATGAGGACTTCCCTGATTTTTCACCTAAT
TTTGCAGATCAggattaaatttaatttttctaaagtgaTTCCAAATTTTG
CAAAACCGGGGTAGCAAACAGAACTTCTCTGAAAATGTTCGTGATATATG
GTAGTGTgctaaaattcgaaaaaataactAAGAGATTTTCTTCAAAGCAG
GGTATTCTGATTTGCAGGACGAAAAAATGACgatagaaatttgaaatttt
tgcggatcgaagaaagatttaaaatttttggcagGTACTtgatttcgcgg
atgaggcccttccaaatttccattggcaCTTAAATATCGCGGATTTCCGC
GGATGACACTCAAATCTgcgaaatccgcaaaatttaatcccccgcaaaag
tttatcccattaaagtaattgGGGTTGCATCAGATAATGTAATAGCTAAC
TTTTTTATATCCTCCCACTTTCTAGTATTTTGGCTATTCTCACTTTTAGA
TTCGTCGAAGTGCAGTCACCGATAAAGTCATCACAACTTCATTGATGGTT
AAATGTCATTTCTCAAAATATGGGTGCTCTTGGACAGGACATATCGTACA
ATTTCAGGTCAGTATTTAAACAAAAtggtttctctacaatttttgcttac
aaaattgACGTCTTGTATGTTCATCATATCGTAAAAAGGAAACGTTCCCT
TACACCGTTGATCCTGCTTGACTCTGCAGTACAGATAAATCAATTCAATT
TATTTACTTTCAGGAGCACAAGCTTAAATGTGATTTCACACCGGCTAGTT
GTCCTTTTCAAGGATGTTACAAAGTCTTGAATCGGGGACAActcaaaaaa
cacaaaaagaatTGTCAACATCGATTTGCAACTTGTACCGAATGTGGCAA
AAAATATGAAACTAAAGATGTATGTTTCATTTAACATTCTTCTTACTAAT
CACNAATGCACAAAGTAGCCAACCAATTTCGTCGCTAGCTAACGCCTCTT
ACTAAATAATCACCAAGCATGAGGCTTCGATGATAAGAATACATCAAGTA
AGGCACCTCCATTAGTGAGCGTTGATCCTGCTTGACTCTGCAGTACAGAT
AAATCAATTCAATTTATTTACTTTCAGGAGCACAAGCTTAAATGTGATTT
CACATCGGCTAGTTGTCCTTTTCAAGGATGTTACAAAGTCTTGAATCGGG
GACAActcaaaaaacacaaaaagaatTGTCAACATCGATTTGCAACTTGT
ACCGAATGTGGCAAAAAATATGAAACTAAAGATGTATGTTTCATTTAACA
TTCTTCTTACTAATCACATCGTCCTCCCACGAAATacctttctttttaat
gaaaaaccgTGGTCAAAAAATATCTTGATGATAGCCTGATGATGAGAGAA
GAACCTCTCGAAACGAAGTCAAACGTAAAATCTCGGGATGCATATAGGTA
ACTTGCAGACTAGGGGTGGCCCATATGTGATTTTTAATGGGCACCAAATG
CACTGgcctgtaaaatacacaatacCAGCAGATTGCAAATATTGACCCAG
CCCACTAAAAACATATGTTAAGTAGGGTTCTCACAAGATTtgagcaaaag
aagaaaaaaactgaaagaaagatCGAGGGGGTCAAACTTTCGGCATTTTC
GAATACTAAAGACGTCATCAGGTGACGCTGAGGTTACCAATGATGCCAAA
ATTTTTACGAAAGATGTCATCATTCCCATTTACtacacattttcaaattt
tcaataccCATCgataaatattatcaaaattatcaaaagagCAATTTGTT
TTCTCTCTTTTCAGGGTCACTCGTGTAAGATTGAATGTCCCAACGATGGA
TGTTATGTTCAAGTTCCCGAGGATGAGGTTCAAAAGATCTTACTATTGTT
GATGTTTTTATTATTACATGTAGGGGTCACGAATCATACAAACTCAGTTA
TTTTTTCTCTTACAAACAAAAGGCTCGCGTGTACTAAGGTCAATGTTGGG
TATGTGTGGACAGGATTCCTTAGAGGGAGACAAAATTTTTGCATTAGTCT
TTGCAGTgatcaaagttcttccgtctcagacagATTTTTGTCTCacagaa
atttttgtcaaagttttccgtCTCAGTTAGAAATGGTTATTTAGCAAGAA
ATAGTGATTTTATTCTCTAGAATAATTCCATCAAAAAGAAATCTTGTATT
AAAACTGTGTTTATGGCTGATTTTACAGTTTGGTTATGTATGTACAATAG
TATGACgttcatatatttttatttttcaaccttttttagaTAGATATTAT
TATTTTCGCTGTATGTTAGGCATTTTAAGAGCATTCTGAGGGGGGGAGGA
GCAATCTAGGgggtaaaaaatctgaaaattttcggGCCCTTCGCCCCAAC
CGTGGCCTGCGGGTGTCACTGTATACCTAAATATCTCTATTAAGAaattt
tccgtctcacagaaaaaaactgcttttacCACTGTCTTTGAGAGACAAAG
TTGGAAAAAAAGTGATCTTTACAGTAAAGAGAAAATTTCGAAACATTTCC
TACAAATCTAGaggtcttttttatttttcatagtcTTCGCCGACCGTCAG
CGTCCGCGCATACCAAGCACCTTTTTATATTTGTGATTAAGTACCCAAAC
TCATCCTCCCTGGATGCTTTGGCATAAAAGGGTACAGGAATGCAGTTGAG
TTGGGTACCCTTTAAATTATCTATTCATCGGAAAATACAGCTCTAAGAAT
GTACTAATAATCATACGGTCATTAGCTTCCTGAAATACAAACCACCTACA
TCAGGTGAACCTgttattaaatttcaaatttattttacgTTTTCAAGATG
GGAGCTCATCGTGATCGATGTCCGAAAGAATTGGTGAAATGTGGATATGT
TATGCATAAATACTATTCTAGTGCCCCAAaggtaaaattatattttgttt
gCGAAAGAGGACTGTCAGTTAAAAGAACTCTAAacatttttcgagatttt
acaGGCTGAAAATAATCTATAAATGAAGATTTGGTAAAGATTTTCGATAA
TTGAGAATTGGAGCTGCCAATATTCACTGCTTAATCAGAAATAAATCGta
ttttacaacccttaggaGAGCAGAAATGAGATACAAATATTGTGGGATAT
tacatttttaaatttggtttaaATAGGAAAAAGAACATGGATGGATAGtg
tgaatcgcagacctctacaaaattAATGCAAATAGTTTAAGGAGTACGAA
TCCGTTAGTTGATGCTAAACAGCGTAATAGGCTTATAGATTAACACTTCT
ATTTTGCTCCACAGTTCCGAAGGGAAGATCTTTTGAGCCATTGCAAAGAG
TGCAAAGAAGGCAAAATGGTGGAACTTCTCAAAGGCAACGAGTGCAGGAA
GATGAAATCAAGGATTTGGGAACTGGAACGGAAAATTGCTCAACTACCCA
CTACTATCAAGGATTATGACGATGATATTgagaatttcgaaaaagaaatt
gaagatttaCCACCTAAGCTGAAACAAATCCAAACGTAAGAACTATTTCA
CTAGTTTTCTAGTGCAAGAGTATCGAAAAATAGTCGACTCACCGATTGAT
TTTTATGCCATTGAGAGTCGGCACTATATGAAATATAAGAGAATTGAAAG
TTTGAGTTTTGTGAGGGGTCAGGTTTGTGTTTCACCTGGTTCACTATTTA
GCAAAACAAACGAGACTCGAGAATAAGAGAAATTTCAGAGCAAGATTTAG
ATCTGAGCCTACAGTAGTGGGTTTTTTTAGCACATTAAAGataatattct
ttttttatgataaagAAAGAAGGCTCTTACGCtgaaaatacaccttttcg
accgtagccgccaattgccgcgcaggcattttttaccaccctaaaaccgt
cctagtctttttttcgcgcctgaagacaatagaaaaaagtgtaaaaaaag
gattggatagagtttagggtgataaaaaatgcccgcgcggcaattggcgg
ctacggtcgaaaaggtgtattaacaAACGAATTCTCAAAATTTACACTCA
CGTGGCACCGAAAGGGGAGAATATTGTTATTTCTTTCGTTATGCGTGTAA
GCAAATAGTAAGAGGTGCTTTAAATGATATTCTTTAAGGTtcaagaaagt
aaaaaaaataattgaatagaGACTATTTTCCTTGTAATAacgatttcaaa
acaaatctgGGCTTTTAAGTGCCAAGGAAACCAGCTGTGCTTCAGGAAAC
AAACATTTCTTCTTGAATAAGAGAAGTCTTTATCTCGGTATTTCCTAAGC
AAATGAAGCTTTTCTTCAGCCAATCATTgagaaagttgagaaatttaaGC
AAGAAAACAATGCAATTTCAACGTTAGAACGGTCAAATGGACCATCGTCA
ACATTTTCATAAAAAGCAATCAATCAAgagtgtgattatttacgtgggtc
ccgtggcctcgtgggttcgtgcccccgtgggtccaaaaaaaaaacccgtg
ggtccaaaaaaaaaacccgtggggccaaaaaaaaaacccgggggtccaaa
aaaaaaacccgggggtccaaaaaaaaaacccgggggtccaaaaaaaaaac
ccgggggtccaaaaaaaaaacccgggggtccaaaaaaaaaacccgggggt
ccaaaaaaaaaacccgggggtccaaaaaaaaaacccgggggtccaaaaaa
aaaacccgggggtccaaaaaaaaaacccgggggtccaaaaaaaaaacccg
ggggtccaaaaaaaaaacccgggggtccaaaaaaaaaacccgggggtcca
aaaaaaaaacccgggggtccaaaaaaaaaacccgggggtccaaaaaaaaa
acccgggggtccaaaaaaaaaacccgggggtccaaaaaaaaaacccgggg
gtccaaaaaaaaaacccgggggtccaaaaaaaaaaacccggggggccaaa
aaaaaaaacccgtgggtccaaaaaaaaaacccgtgggtccgaaAAGTCAT
AGTCTATTTTTACATAAAGTCAATTATCCAatcaataatattttcttaCC
AATGAAATTTACATCTCTTGTAATAAAAGATATACGTTACGATTCTACAC
ACTTTTGTAGGAAAACAGCCTCTCTTGAAAAGTCTTACAACTCTAAAGTA
ATTAAAGAACTCATAAGGTTTTTGTTCGGCGCGAGTCTATACACATAGAG
TCTTGGCGCAATTTTTTGGATccacgagatacccacgtaaatcttttgga
cccacgagatgcccacgtaatttttttggacccacgagataccctcgtaa
ttttttttggacccacgagatacccacgtaatttttttttagcaCCCACG
AGATACCAACGTAAATTTTTTTGCACCCACGAGATACccatgtaaatttt
ttttggacccacgtaatatttttctggacccacgaaatacccacgggttt
tttttttggacccacgggttttttttttggacccacgggggcacgaaccc
acgagggcacgggacccacgagggcacgggacccccgagggcacgggacc
cacgagggcacgggacccacgagggcacgggacccacgagggcacgggac
ccacgagggcacgggacccacgagggcacgggacccacgtaaataatcac
actcATCAATCAACAACAAATTTTAAATGTAGGCTATTAATCACTAAGCT
CGACCATCCTTCTAATTCCAGTGGATACTTTCGAATTACCTTTGTGTGTA
AAACGCAAATGACTAATAATGTAGCTTCTAATTCTTGTTTCAGGCTTCAA
GAAGCAAAAGAGATGGATGGTCAACCCACAAGTCTACCTGTCGAAAAGTA
ATAACTGAGTAGTAACTTTGCCAATAGACTTTCGTTTACTACTGACGTTC
GAGAAAAAGATTCTACCCGAGACCCTGAATGACCCTGAAGAGactgtttt
ctgattttttgtttttgtgacaCCATATTGGACATGGGAAGTGGAAGAGT
TACCCTGCCCAGCACATTCCGTAccttttttttgctgtaacatCTAAAAA
AAGCGAGAAAcataatttttcttcaaattagtcCAGCCCACGCCAAATTC
AGTCATTGTTTTGTTAAATTTCGTAAATTTTTCGGGAAAGATTTTACTCA
AATgctctttgttttatttttcagtttccaTAGTGATCTCGCGACTCAAG
GTAAAAACATTAATTTGCTTCAAGAAAGCATAGCaaacctttttcattct
tcaatATATTTAATGTTATTTTTCGCTTGATATACTACCGTATCACGACC
CCGGTGAAGCCCCCCCCCActcgattaaaaaaaaacaaataaaaaattgt
ccCTGGCAGTAAAACATGTGAAATATAAATTATACCGTTTTCATTGAGTA
ATTTTTGAGTAAAAATTAGATTACCTCCGATTGGGATGAAATATCAGGGT
ATTTTTTGAACcgggaaaaacttttttttgtggaTTGTCCAATTAACTAA
GTCTATCGTAATATCCGCCAAGCATGCTTTTAAAGGCTGACATACTGAAG
GCTAcaataattcaaatttacaaCGAACCAAGTTGAGAGTAAAAACTTTA
GTTTACTCAAAGTCTGCAGGCTCTAATTATATCATTATAAATTTCCACCA
GAAAAACTAACAGAGAACTTGGTAAGATTTATCAAATCTGACAATATCTT
GGAGCTTGTGACAACGATCAATCAACATCCCGAAATTAAACCGAACGTTA
GTGATTTAATCAACAACTCGATCTGGTCCAAAAGTAATAAATGTCTGGTA
TTTGTTTTGACAaggtatctttttttttttgatatttctgATTTTTGACT
ATAATTTCCAAATCAGTAAAGACAGATTGTCCATTGCCCTGTCCAAAATT
AATTTAGAATgaggtaaaaatgaaaaaaatgacgaAGAAATATCAGCTGT
TGGAACAGAAAGGAACAAGATTACTCCCCCCCCCTCATGTAGCAAGGGCT
TCCATTTGACCCTTGAGACCAAGTCCCCCCTTATTTCtcagtttttaaaa
tttttgccccttgtgtttttctctaaattttaaatcaccccttattttaa
gggggggctgaaaccatgttAATGGACGTGGTGAATTTTTATGTCGGATG
GACAAAAATACAACGAATTTCATAATAGACTCAATATTCAAACTGACAAA
AAGATTAAAATATTCCTattccagctggcacacaacgttgtttcaacgtt
catatgACGTTATATGACATTGTGAACGTTatttaaacgttgaaacaacg
ttatgtgtcAGCTTACATAACTTCCGCCGTCGTGGAAACACATATTCGAT
TTGCGATCACTTCGTGGAATTCGAATGTTTATCTTCGAATGTTGGATTTC
TTTAAAGTTGTATAGCTTTTGGCAAAGCCGGGAAAACCTCTATATAACCA
CACaacaatagatcttatcggagatttttctaaaaaagcgatgtattgtg
ggattgtttcgggagtattacaatagaaatctcttagaaaATCCTCGAGg
gaaatcaaaaactccgataaggtctattgtttTCCAGGACGTAGGCAAAT
CACGCCATAATCATAAACTTGAACTCAGGTAACCTAAATcatattctttt
cttttaggTATTCTAATGAGCtcactgaaaatgaaatgaaagaacATTGG
ACGAAAGCTATAACATCTAATCGAGAGGGAATACACCCGTCAATACCTAT
CTTACTAAAGTTTTATCCAAACCTTTTGAATATCAGAATTGTCACAAATG
ATCAAAGTGGATCTGCAATTAACATATCATTTTTCGCAAAACAGCCCGAA
TTATTTGAATATTTGATTAATCAACCTGgcattgactttgattttgcGGA
GTATAAAACACTTCAGGAAATGGTCAAGCTAATCCCAGAATTACACAATT
GCAAGCacttaatcaaaagaaaaaagtaagtacACCATCTTTTTTCGTGT
AAAATGTTTAAATGTGAAGCTTTTTTGAGGCTTTcctgtttttattttct
ccGCTGACACATAAGATTTCCGGGGGAGtaacttaggcaaaaataggtga
tGGGTATTTGCGAACGCTTTTTGACTGTCTGAAGTCGCTGGgattacaaa
aataaaacaatgagTAAAACTAGTCTATCTAAGGGATCGGTATTTTTTCC
CTTTTGGGTCTCACTACAAAAAccatgaaaagtaaaaaatctgaaGTTAT
GAAGCTTTTCGGAAATTGTCTCTGAGGGTCGGTTTTAGGAGGCTGATTAA
CAAGCTTTCTGTCCTTCCCACCGATAAACTTTTTTCCTAAACTTACCTAA
TTTCTCACTTTTCACGCGTGATACTGTTCCAGCTCGACTTCAATCTATTG
ACTGCCAATTTAAGACCCAAAAATTCACAGGGGAGTAAACAATGGGACTT
CGAAAATGGTCGGGTATGGCTGAAATttagcacacttgttccttgggcga
atatctgggggtgttcctttcatttttacaaaaatttcatttttaagagc
GTGGTCATGAGTTTTAGCTCtaatacgaggctgaaactttggggGTAGGC
TTCAGACTACAAAAATGATTGGGTttcggctgaaatttggcctactagtt
cattgggtgaatatctgagggtgttttttggacctacctccgggtacccc
ggtggaggtcctataaattaactgttgtctgttcgtccgtccgtctgccc
gttcgtctgttaccagcttttctcgagattggctcattagttttttctga
tttttggcacaaagatgcaaaatagcaatggccaaaatgtaacggagccc
gattttcgaaaaaaaaattttccggccgaaaatagcggaaatatgccgga
aaaactgtttttttggcattttctcgagattttatcataagtttttttct
gatcttttgcagaaagatgcgtattcgcaatgctcaaaacatggccgagt
tcgatttttgagaaaaaaaattttcctgttgaaaatgccggaaatcgttg
tttttgcagatttttattggattttttccttatgtttctatatttttcac
acaaaaacattattgataataatgctcaccatcaagcatgattcaattgt
caataaaactgatttttgcgaccagaactttatANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcaacaatca
atgatgaatttattgcgttatgcgtTTTCGCTAAACGCTGTATTTTctta
ctgatttttttcatttttctcctcacattgctatctaactttcatcatca
ggtaggtccattcagcatctagtttgttattcaatttttgaggattttga
tttttgggaccTGGGGACAGGTTTTTCATCAAAACGAGGCTTTTGTTAAT
TGGACTTTTCTATCACTTTTACAATTGGGGCTACGAATGATTGAAAAATA
CTGAAGTTCAGCCCAGTGTGGTTTGCACGTTCGTCAGTTCTCAGTTCTTT
ATCGTTTATCGATATTTCGCCTCTCATCTTTTAGGAAAATCTTCAAAGAA
GGTGGATTCTTCAGTTTTTTCTAAAGCCAACATTTTCTTCGACACGATTG
GACGAAGAAATGTTTTCAAGAACAACGACTTGAACAATTATGTCTCTTGG
AAGTAGTCTGAGTCTGTGTTTGAATTCAAGCTCATTTTTAGTAGCAAAAA
TCGTCCCTCTTGCGTCTATGATGTCCAGGTTACGTTCTTTCAACCTTCAA
AACAGCGGTGTGTACCTTTTCGGATATAACATTAAGATTGCTTTAAATAT
ATTCGGTCATATACAAATTATAAAGATAATGGAATCAAGTACTGCCACGA
TATAAAAGAACGTTCGGTCAGCTCCACAATCGCTTCATGGTCCTAGATCT
TTTGTTACAATTTTGTCCTAGGTGTGGGGGACACTCGAGGTAAATAACCT
ACCATACGTGCGGCTtttaagggtatattttccaTGCTTCCCAAAGTGAA
ACCAGCAAAGTTGAAAGAAAgggcactctaagggtgtaaaatttcgaaaa
tctgaccatattttgcctgaaaatggtcaaaaattctcaagaaatacacc
gtaagggtcgatttttcgcttaaatttgctcaaattttgtaaaattttct
ctgcactgtaggGTCCGATTTCTAATCTAAAATCTACTTTTGGTATaatt
atttgtaaaaatatatattttgtaaATAGGCGAANCGATTTCTAATCTAA
AATCTATTTTTGGTATaattatttgtaaaaatatatattttgtaaatagg
cgaatatttttcatttatatttttgaatttatgaATAATTTCTCTGGTCA
CATTGGAATTCTACattcttgaaatatttgctGTCGAAAGATACGAGTTT
AAAATTCTGAAGATTCCCTTCGACTTTTAATGCACAAttaaagtcttatt
tttatagcaaaagatagcaaaaaaaaagaagaacaaaaacagcaaaatca
aaaaactgaaaaaaatggAAGCGAAAAGTTACAGATTCGAGCTTGTTGGA
CAAGATGTCAGTGAATTTCGCTGTAAcatttgcgaattgtttttacGAGA
AGCAACCGAACTACCATGCTCACATATGTTTTGTCAAGCCTATCTGTGGG
AATGGTACATTGGACTAAAATCGAAGTAAGAGCTTTAACGTTATAGTACT
CTGgtacacgcttctttttttataagaatggtgtttttttcattttatca
tggatattctttacttattggcgaaaatcatcctaaaaaatattcttacg
gcatggaccttttcataaattacgtcacgaacatcacttgcctcgttttg
aaattattgccaaggtgattaactcccagggGATTTTATTTAAACtactt
tcttttcataaaaaaatcatttaatgtctcaagggccATAATCACCATAG
taattgtttgaaaacgaggcaagtgatgttcgtgacgtaatttatgaaaa
ggtctattcttttaggttaagatcgaaatttaaCTAAGATTTAACATGTA
ATACTCGCCTGAAGCATAGAATTATGGCGCGCGGAAGcgccaataaatac
tatcttgtttaaaacgataatatttttttttaaacatattgtcttcgttt
aaaaacatactgtctttttaaaaacaatactatcttcgtttaaaaacata
ctatcttcttaaaacaatactatcttcgtttaaaaacatactatcttttt
aaaacaatactatcttcgtttaaaaacatactatcttttaaaagaatact
ttgttttttaaaaacataccatcttcgtttaaaaacatactatttcaTCT
AAAAAGAAACTGACGGTTTGAAAAGCCGAGTTAACAGTTTAACgagtgaa
aatatatattttttaaatgtcgaGTAAGGTTTTATCTCTTTTACCCAAAT
TATAGGGGCTACGCTGGAGAGTGGGTACCTTGGGGTAGAGTGACACACAT
TGAACGCAATATCAGCGTTTCAAATAAACATGGCGTTAAGGAGGAGGGGA
AGGCCAACCGAAATCATTAACGAGAAACAAGTTGCTGGTTTAAAAAGGAC
TGGACTcaacgacccttagcgggacaaatttgaccaagtttgaccaaatt
tcgatctttcagggatCTTTCCTATTATTccaacccttagtgggactgaa
atttgacgCTGAGAGAACGTGGTGATCGACCACATGTTATCGTAATGCGC
ATGCGCACCGTTGGAAATTGGATAAGCAAGACAAGAAAGATTTATAACTC
GGAATTTTTTATAATCAGCCAAATTAGTTGATCTATAACTCGACAAcctt
taaacgaagatagtatgtttttaaaaaagatagtattgttttaaaaagat
agtatatttttaaacgaagatagtatgtttttaaaaaaagatagtattat
tttaaaaagatagtatgtttttaaacgaagatagtaatgttttaaaaata
cagtatcgttttaaacaagatagcATTTATTGGCGCTTCCGCGCGCCATA
TAGAACGGTGTTCTTAGgctcagttgctaaattccatgatggtgatattc
ttaccatatttggtcaatttcatcataaacattcttataaagtatattct
tataaaaaaagcgtgtagcttCCACAGTAGACCTCTTTATGTATTATACC
TTAAAGGGACTCCTTGGTCATTGGAGTTTTTCCGAGCATGATATTGTATT
GATccaaaaaccccaaaaatgtaATGAAAAAGTGTAAAACTTGCAACTGA
CTCTTGTGCTGTGGTTTACTTTTCTCCTTGCAGCCCTTTGCTTCAGACTG
TCATGGCGGAGACCACAATGTTGTCTACAGAGCCAGTTTGCcgactttct
gttttttttctccataaAATCAACTTGATTTGCCTGTCTAATTTGAACAT
TATCAATTTTGTAGAGAAAGGCGGCCGTTGGAGATGTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029130XLOC_029130Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045553-exon-scaffold_1-1491911889:24961..25257TCONS_00045553-exon-scaffold_1-1491911889:24961..25257Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1510915933:24961..25257TCONS_00045553-exon-scaffold_1-1510915933:24961..25257Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1575043694:24961..25257TCONS_00045553-exon-scaffold_1-1575043694:24961..25257Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1491911889:25921..25996TCONS_00045553-exon-scaffold_1-1491911889:25921..25996Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1510915933:25921..25996TCONS_00045553-exon-scaffold_1-1510915933:25921..25996Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1575043694:25921..25996TCONS_00045553-exon-scaffold_1-1575043694:25921..25996Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1491911889:26660..26767TCONS_00045553-exon-scaffold_1-1491911889:26660..26767Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1510915933:26660..26767TCONS_00045553-exon-scaffold_1-1510915933:26660..26767Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1575043694:26660..26767TCONS_00045553-exon-scaffold_1-1575043694:26660..26767Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1491911889:26924..27079TCONS_00045553-exon-scaffold_1-1491911889:26924..27079Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1510915933:26924..27079TCONS_00045553-exon-scaffold_1-1510915933:26924..27079Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1575043694:26924..27079TCONS_00045553-exon-scaffold_1-1575043694:26924..27079Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1491911889:27975..28037TCONS_00045553-exon-scaffold_1-1491911889:27975..28037Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1510915933:27975..28037TCONS_00045553-exon-scaffold_1-1510915933:27975..28037Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1575043694:27975..28037TCONS_00045553-exon-scaffold_1-1575043694:27975..28037Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1491911889:29008..29091TCONS_00045553-exon-scaffold_1-1491911889:29008..29091Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1510915933:29008..29091TCONS_00045553-exon-scaffold_1-1510915933:29008..29091Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1575043694:29008..29091TCONS_00045553-exon-scaffold_1-1575043694:29008..29091Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1491911889:29475..29695TCONS_00045553-exon-scaffold_1-1491911889:29475..29695Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1510915933:29475..29695TCONS_00045553-exon-scaffold_1-1510915933:29475..29695Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1575043694:29475..29695TCONS_00045553-exon-scaffold_1-1575043694:29475..29695Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1491911889:31954..32007TCONS_00045553-exon-scaffold_1-1491911889:31954..32007Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1510915933:31954..32007TCONS_00045553-exon-scaffold_1-1510915933:31954..32007Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1575043694:31954..32007TCONS_00045553-exon-scaffold_1-1575043694:31954..32007Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1491911889:32335..32360TCONS_00045553-exon-scaffold_1-1491911889:32335..32360Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1510915933:32335..32360TCONS_00045553-exon-scaffold_1-1510915933:32335..32360Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1575043694:32335..32360TCONS_00045553-exon-scaffold_1-1575043694:32335..32360Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1491911889:32812..32974TCONS_00045553-exon-scaffold_1-1491911889:32812..32974Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1510915933:32812..32974TCONS_00045553-exon-scaffold_1-1510915933:32812..32974Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1575043694:32812..32974TCONS_00045553-exon-scaffold_1-1575043694:32812..32974Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1491911889:33818..34135TCONS_00045553-exon-scaffold_1-1491911889:33818..34135Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1510915933:33818..34135TCONS_00045553-exon-scaffold_1-1510915933:33818..34135Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1575043694:33818..34135TCONS_00045553-exon-scaffold_1-1575043694:33818..34135Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1491911889:35845..36985TCONS_00045553-exon-scaffold_1-1491911889:35845..36985Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1510915933:35845..36985TCONS_00045553-exon-scaffold_1-1510915933:35845..36985Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1575043694:35845..36985TCONS_00045553-exon-scaffold_1-1575043694:35845..36985Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1491911889:38775..38800TCONS_00045553-exon-scaffold_1-1491911889:38775..38800Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1510915933:38775..38800TCONS_00045553-exon-scaffold_1-1510915933:38775..38800Clytia hemisphaericaexon
TCONS_00045553-exon-scaffold_1-1575043694:38775..38800TCONS_00045553-exon-scaffold_1-1575043694:38775..38800Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:24961..38800 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.3093	30.5505	9.60602	6.19121	12.4223	9.09502	11.0406	10.6093	6.97205	9.54964	8.67	3.94922	3.61117	4.08269	4.71982	4.88473	8.24986	9.22759	7.40831	8.55974	8.41337	9.13056	16.12	15.6762	8.96498	7.42337	8.92395	6.72205	15.8266	14.5446
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045553 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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