TCONS_00045493 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045493
Unique NameTCONS_00045493
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length164

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045493 ID=TCONS_00045493|Name=TCONS_00045493|organism=Clytia hemisphaerica|type=transcript|length=164bp
cacaGGTGTTATTTTGAGTCGTCTTGAAGGCAAGCTGTTGGAGATCCGGT
CTTATCACATTAATTGGGAGTCTTACCAGCAAGGAAACATGATCAGTCAG
GCTGATTACCAATTCATTAGCCACTATGATAAACAAAATTTGGAAGGAAA
GAAACAACTCTTTG
Run BLAST on NCBI

transcript from alignment at sc0008066:1..164

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045493 ID=TCONS_00045493|Name=TCONS_00045493|organism=Clytia hemisphaerica|type=transcript|length=164bp|location=Sequence derived from alignment at sc0008066:1..164 (Clytia hemisphaerica)
CAAAGAGTTGTTTCTTTCCTTCCAAATTTTGTTTATCATAGTGGCTAATG
AATTGGTAATCAGCCTGACTGATCATGTTTCCTTGCTGGTAAGACTCCCA
ATTAATGTGATAAGACCGGATCTCCAACAGCTTGCCTTCAAGACGACTCA
AAATAACACCtgtg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029070XLOC_029070Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045493-exon-sc0008066-1491911889:1..164TCONS_00045493-exon-sc0008066-1491911889:1..164Clytia hemisphaericaexon
TCONS_00045493-exon-sc0008066-1510915933:1..164TCONS_00045493-exon-sc0008066-1510915933:1..164Clytia hemisphaericaexon
TCONS_00045493-exon-sc0008066-1575043694:1..164TCONS_00045493-exon-sc0008066-1575043694:1..164Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0008066supercontigsc0008066:1..164 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045493 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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