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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045315 ID=TCONS_00045315|Name=TCONS_00045315|organism=Clytia hemisphaerica|type=transcript|length=754bp
TTCTTGGAGTGTTGTACTACCAAAGCACCATAATCTCCATGCACGTGTga
gtcaaaaaaataaaaaaaatcatcaaaaggaatacaacaaaaagattttt
cattgtTGTCAGTGATAACCACAAACGACTGTGTGTCAATTCTGTTCAGC
ACCATAAAGAGTTCAGTAGCTGTACAATTAAGTTCTTTTTCAATGTAAAA
GCTGATCGGGAGTAGATCCATGCTCTCGACGACTGTTGTTCCGTATTGTT
CACCATgataaaaattaccaaaatcgATACATCCCACAAAAGCTTTTAAC
ACATCGATTTTCTGGAGGGAATTTCCGCAAACAAGATCGTACAAGAAATG
CCCAACCAATAGAGCGATGGTTGTACAGGCATTGCTCCCATTTCTACCGT
TTAGATGCGACTGACATACATCACGAGGAAATTGAATAGTGTTTTCAGTA
TgtgaaaatgactttccttcTAACAACTCATTACCCGTGAACAAAATCAa
ctccaagtccaaaaaaacatcttcattttcttcgttATCTGCGTCAATGT
CGTTGTCGTTGTTAACATCCCCTTCGTCATCATCATAGTCATCATCGTCG
TCATCATCATCAGAGGGGGAGTTGTTACTTTGTTCTAATGATGAGATGGC
AGGTACAAATGGCTGAAATAACTCCAATCCGAGATGCAGCTTATTTTGTG
CAAATAGGTATCCATCACGGAGCAAGATGAGCATACCAGTTTTCGAGGTC
TAAA Run BLAST on NCBI protein sequence of TCONS_00045315-protein >TCONS_00045315-protein ID=TCONS_00045315-protein|Name=TCONS_00045315-protein|organism=Clytia hemisphaerica|type=polypeptide|length=244bp
MLILLRDGYLFAQNKLHLGLELFQPFVPAISSLEQSNNSPSDDDDDDDDY
DDDEGDVNNDNDIDADNEENEDVFLDLELILFTGNELLEGKSFSHTENTI
QFPRDVCQSHLNGRNGSNACTTIALLVGHFLYDLVCGNSLQKIDVLKAFV
GCIDFGNFYHGEQYGTTVVESMDLLPISFYIEKELNCTATELFMVLNRID
TQSFVVITDNNEKSFCCIPFDDFFYFFDSHVHGDYGALVVQHSK Run BLAST on NCBI transcript from alignment at sc0007485:136..889 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045315 ID=TCONS_00045315|Name=TCONS_00045315|organism=Clytia hemisphaerica|type=transcript|length=754bp|location=Sequence derived from alignment at sc0007485:136..889 (Clytia hemisphaerica)
TTTAGACCTCGAAAACTGGTATGCTCATCTTGCTCCGTGATGGATACCTA
TTTGCACAAAATAAGCTGCATCTCGGATTGGAGTTATTTCAGCCATTTGT
ACCTGCCATCTCATCATTAGAACAAAGTAACAACTCCCCCTCTGATGATG
ATGACGACGATGATGACTATGATGATGACGAAGGGGATGTTAACAACGAC
AACGACATTGACGCAGATaacgaagaaaatgaagatgtttttttggactt
ggagtTGATTTTGTTCACGGGTAATGAGTTGTTAgaaggaaagtcatttt
cacATACTGAAAACACTATTCAATTTCCTCGTGATGTATGTCAGTCGCAT
CTAAACGGTAGAAATGGGAGCAATGCCTGTACAACCATCGCTCTATTGGT
TGGGCATTTCTTGTACGATCTTGTTTGCGGAAATTCCCTCCAGAAAATCG
ATGTGTTAAAAGCTTTTGTGGGATGTATcgattttggtaatttttatcAT
GGTGAACAATACGGAACAACAGTCGTCGAGAGCATGGATCTACTCCCGAT
CAGCTTTTACATTGAAAAAGAACTTAATTGTACAGCTACTGAACTCTTTA
TGGTGCTGAACAGAATTGACACACAGTCGTTTGTGGTTATCACTGACAac
aatgaaaaatctttttgttgtattccttttgatgattttttttatttttt
tgactcACACGTGCATGGAGATTATGGTGCTTTGGTAGTACAACACTCCA
AGAA Coding sequence (CDS) from alignment at sc0007485:136..889 >TCONS_00045315 ID=TCONS_00045315|Name=TCONS_00045315|organism=Clytia hemisphaerica|type=CDS|length=732bp|location=Sequence derived from alignment at sc0007485:136..889 (Clytia hemisphaerica)
ATGCTCATCTTGCTCCGTGATGGATACCTATTTGCACAAAATAAGCTGCA
TCTCGGATTGGAGTTATTTCAGCCATTTGTACCTGCCATCTCATCATTAG
AACAAAGTAACAACTCCCCCTCTGATGATGATGACGACGATGATGACTAT
GATGATGACGAAGGGGATGTTAACAACGACAACGACATTGACGCAGATaa
cgaagaaaatgaagatgtttttttggacttggagtTGATTTTGTTCACGG
GTAATGAGTTGTTAgaaggaaagtcattttcacATACTGAAAACACTATT
CAATTTCCTCGTGATGTATGTCAGTCGCATCTAAACGGTAGAAATGGGAG
CAATGCCTGTACAACCATCGCTCTATTGGTTGGGCATTTCTTGTACGATC
TTGTTTGCGGAAATTCCCTCCAGAAAATCGATGTGTTAAAAGCTTTTGTG
GGATGTATcgattttggtaatttttatcATGGTGAACAATACGGAACAAC
AGTCGTCGAGAGCATGGATCTACTCCCGATCAGCTTTTACATTGAAAAAG
AACTTAATTGTACAGCTACTGAACTCTTTATGGTGCTGAACAGAATTGAC
ACACAGTCGTTTGTGGTTATCACTGACAacaatgaaaaatctttttgttg
tattccttttgatgattttttttatttttttgactcACACGTGCATGGAG
ATTATGGTGCTTTGGTAGTACAACACTCCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045315-exon-sc0007485-1491911889:136..889 | TCONS_00045315-exon-sc0007485-1491911889:136..889 | Clytia hemisphaerica | exon |
| TCONS_00045315-exon-sc0007485-1510915933:136..889 | TCONS_00045315-exon-sc0007485-1510915933:136..889 | Clytia hemisphaerica | exon |
| TCONS_00045315-exon-sc0007485-1575043694:136..889 | TCONS_00045315-exon-sc0007485-1575043694:136..889 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007485 | supercontig | sc0007485:136..889 . |
Blast
The following BLAST results are available for this feature:
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