TCONS_00045297 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045297
Unique NameTCONS_00045297
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length133

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045297 ID=TCONS_00045297|Name=TCONS_00045297|organism=Clytia hemisphaerica|type=transcript|length=133bp
ggaaaacatatttttttaaattggtgaTTCTGACTTTCCTTTTAATCCTT
TCTCTAAGAAGGCTGTCAATATTACATGAGGGATATTTAGACGGTGTCTA
TCAAATGAATCAAACAGcaaaacgcaatcgaat
Run BLAST on NCBI

transcript from alignment at sc0007441:11..143

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045297 ID=TCONS_00045297|Name=TCONS_00045297|organism=Clytia hemisphaerica|type=transcript|length=133bp|location=Sequence derived from alignment at sc0007441:11..143 (Clytia hemisphaerica)
attcgattgcgttttgCTGTTTGATTCATTTGATAGACACCGTCTAAATA
TCCCTCATGTAATATTGACAGCCTTCTTAGAGAAAGGATTAAAAGGAAAG
TCAGAAtcaccaatttaaaaaaatatgttttcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028878XLOC_028878Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045297-exon-sc0007441-1491911889:11..143TCONS_00045297-exon-sc0007441-1491911889:11..143Clytia hemisphaericaexon
TCONS_00045297-exon-sc0007441-1510915933:11..143TCONS_00045297-exon-sc0007441-1510915933:11..143Clytia hemisphaericaexon
TCONS_00045297-exon-sc0007441-1575043694:11..143TCONS_00045297-exon-sc0007441-1575043694:11..143Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0007441supercontigsc0007441:11..143 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045297 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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