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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045242 ID=TCONS_00045242|Name=TCONS_00045242|organism=Clytia hemisphaerica|type=transcript|length=749bp
TGTAGTTAAAACAAGCAAGAGGGAAAGATAAAACCTTTAACGCTTTTCAG
GAATTTAGGAGAAactaattttttatgacttttacCTTTACGAGGTGATA
ACACgctcatttcaacttttcttctttttgagacATTTACAAAAAGCCCA
GAATTGGGCCCAAAACCCCCAATTTTACCCTTTAAAAGACCCAAATACAC
AAAAAACAATATTGCCATTCAATTCTACACCATTCAATTGTGTTATATTC
GTAGTTTCATTAGAATTGGACGACATcgactttttttgcttttttgcccT
GGGGACACTCATCGGGGACGCAAAGTCTTAAAGGGTTAATATAACTAGTA
GTAGTACGTAGTGGCAAGTAGTGGATACCAGCAACCTGCCTAAGGCATCC
CTTGGGTCCTAATTTGCTGCCAAGTTATTCTGATGCAAGGGGGTTGCTTG
AAAATCTCCTTCAATCTTCAAACTATACATAGAGCTTTAGGGTGTGGTAG
GCAGGGCGGGTACATAattagtcggggaaaaatttcgtctccTAGGagga
ggcattttcgtcacttctccccgaccaaaatttcaaattcgtgacttttc
cccgaccaaatttacaatttagtcacttccacccgactaaattgtccaaa
tgaaatggtttccttcactagctcggaAAATAGATCTTGTAAATTTCGAC
GTTTCAGGAGCAGCCACCGGCGGACTTTTTCCAAAAGTCTGTactattt Run BLAST on NCBI transcript from alignment at sc0007289:85..977+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045242 ID=TCONS_00045242|Name=TCONS_00045242|organism=Clytia hemisphaerica|type=transcript|length=893bp|location=Sequence derived from alignment at sc0007289:85..977+ (Clytia hemisphaerica)
TGTAGTTAAAACAAGCAAGAGGGAAAGATAAAACCTTTAACGCTTTTCAG
GAATTTAGGAGAAactaattttttatgacttttacCTTTACGAGGTGATA
ACACgctcatttcaacttttcttctttttgagacATTTGATGATGGGTTT
CGTAACAGTTTGTCCTTATTATTGTGCATTCTGCATTTTGCGTACCAGTT
ACGAATAACAGCAAATCTGAACTCGCTGCTCGAATATAGCCGTTGCTTTT
CCGTGATGGAATGAAGATTTTNTGAGACATTTACAAAAAGCCCAGAATTG
GGCCCAAAACCCCCAATTTTACCCTTTAAAAGACCCAAATACACAAAAAA
CAATATTGCCATTCAATTCTACACCATTCAATTGTGTTATATTCGTAGTT
TCATTAGAATTGGACGACATcgactttttttgcttttttgcccTGGGGAC
ACTCATCGGGGACGCAAAGTCTTAAAGGGTTAATATAACTAGTAGTAGTA
CGTAGTGGCAAGTAGTGGATACCAGCAACCTGCCTAAGGCATCCCTTGGG
TCCTAATTTGCTGCCAAGTTATTCTGATGCAAGGGGGTTGCTTGAAAATC
TCCTTCAATCTTCAAACTATACATAGAGCTTTAGGGTGTGGTAGGCAGGG
CGGGTACATAattagtcggggaaaaatttcgtctccTAGGaggaggcatt
ttcgtcacttctccccgaccaaaatttcaaattcgtgacttttccccgac
caaatttacaatttagtcacttccacccgactaaattgtccaaatgaaat
ggtttccttcactagctcggaAAATAGATCTTGTAAATTTCGACGTTTCA
GGAGCAGCCACCGGCGGACTTTTTCCAAAAGTCTGTactattt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045242-exon-sc0007289-1491911889:85..218 | TCONS_00045242-exon-sc0007289-1491911889:85..218 | Clytia hemisphaerica | exon |
| TCONS_00045242-exon-sc0007289-1510915933:85..218 | TCONS_00045242-exon-sc0007289-1510915933:85..218 | Clytia hemisphaerica | exon |
| TCONS_00045242-exon-sc0007289-1575043694:85..218 | TCONS_00045242-exon-sc0007289-1575043694:85..218 | Clytia hemisphaerica | exon |
| TCONS_00045242-exon-sc0007289-1491911889:363..977 | TCONS_00045242-exon-sc0007289-1491911889:363..977 | Clytia hemisphaerica | exon |
| TCONS_00045242-exon-sc0007289-1510915933:363..977 | TCONS_00045242-exon-sc0007289-1510915933:363..977 | Clytia hemisphaerica | exon |
| TCONS_00045242-exon-sc0007289-1575043694:363..977 | TCONS_00045242-exon-sc0007289-1575043694:363..977 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007289 | supercontig | sc0007289:85..977 + |
Blast
The following BLAST results are available for this feature:
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