TCONS_00045205 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045205
Unique NameTCONS_00045205
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length161

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045205 ID=TCONS_00045205|Name=TCONS_00045205|organism=Clytia hemisphaerica|type=transcript|length=161bp
CATCACTTACAGTAGAAAATGCAAATTCCCTTTCACTTTCAGCATCACTT
TTCATTTCACTGTCTTCAGAATCAACTAACAAATCATTGcatggctccga
atggggttctaggtccccccaacaaatttaggttCCCCCCCCTAcgattt
aggtcccccca
Run BLAST on NCBI

transcript from alignment at sc0007188:934..1094

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045205 ID=TCONS_00045205|Name=TCONS_00045205|organism=Clytia hemisphaerica|type=transcript|length=161bp|location=Sequence derived from alignment at sc0007188:934..1094 (Clytia hemisphaerica)
tggggggacctaaatcgTAGGGGGGGGaacctaaatttgttggggggacc
tagaaccccattcggagccatgCAATGATTTGTTAGTTGATTCTGAAGAC
AGTGAAATGAAAAGTGATGCTGAAAGTGAAAGGGAATTTGCATTTTCTAC
TGTAAGTGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028788XLOC_028788Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045205-exon-sc0007188-1491911889:934..1094TCONS_00045205-exon-sc0007188-1491911889:934..1094Clytia hemisphaericaexon
TCONS_00045205-exon-sc0007188-1510915933:934..1094TCONS_00045205-exon-sc0007188-1510915933:934..1094Clytia hemisphaericaexon
TCONS_00045205-exon-sc0007188-1575043694:934..1094TCONS_00045205-exon-sc0007188-1575043694:934..1094Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0007188supercontigsc0007188:934..1094 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045205 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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