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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045014 ID=TCONS_00045014|Name=TCONS_00045014|organism=Clytia hemisphaerica|type=transcript|length=1180bp
GTGCTTCCTTGGGATGGGTTGCCACCTCGGAAATCCTATAATAAGGAAGA
CAACATCGAACGTAAGTGGAAAAATTCTATATTAATTTACAATCAAATAT
TAANNNNNNNNNNNNNNNNNNATCATTTTGGCCAGTGCTTCCTTGGGATG
GGTTGCCACCTCGGAAATCCTATAATAAGGAAGACAACATCGAACGGAAT
AAACTGAAGAACAACCCCGTAAGTCCGTCCGAGCGTTGGGCTCAGATTAA
AGCTGAGCAAGAAGAGCCTGATTGGGATGACGAATTGAATTGTTCGGAAT
TGTCGGATTCAGCCGAAGTGATTGAGTAGCTCGGTAAGTTTTCATTTGTT
TGCAATACTTCCGGCCATTGCTCATGTACGGGAGCTCCTCGTTGCAGTGG
TTGAGGCGGTTTCTCATATCTCCACACCGTAAACGCTCCgaatttttctt
tcctcaaTCCCATTCGACGAAGATAATCAGCTCTGTATTCTTCTGTTGTC
AAACGTATTAAGATATCTAGTCGGCGGTCTTCTTCCCTGATATTGCTTGC
TTCTTTGGGTGATCTTCTTTTAAGTCTTGTCAAGATTATCTCACTGTGCA
TCCTTCCAAAATACGAAAGAATAAGTTGGGGTTTTGTGTTTATTATATCC
CTTTGCAGTTCGATACAGGGTGCTATCNNNNNTTCTTTTAAGTCTTGTCA
AGATTATCTCACTGTGCATCCTTCCAAAATACGAAAGAATAAGTTGGGGT
TTTGTGTTTATTATATCCCTTTGCAGTTCGATACAGGGTGCTATCTTCAG
CTGTATAAATTGAAAGCGAATTCTTGTGATTGTGTCTTGATTGATCGCTC
ACCATGAGGACGACTCGTATTTTCTTTAACAGCATGGCCTGTTGCTTCTG
TGACATAATTTTATCCATCTTGATTTCTAGATTCACTCGTCCTGTCGCCA
GAAGTAATTGAAAGCTGAGCGTGGACAATCGCAGCACCATCTTGTCAACC
ATCAGAATGTTGAACCGTGAAATATaatgattttttgtttcttttatacA
CCTCACAAAAATTTCGTTTGTTATTTCCTTTCCTCCACAGCTTCCTTTGT
TTCGTCACAATACATATAGTACAAACTTTTGCGGTACTTCGGTTACCATG
ATTGCAACTCTTTTAAAATTAATGAGTCTT Run BLAST on NCBI transcript from alignment at sc0006680:1..1401- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045014 ID=TCONS_00045014|Name=TCONS_00045014|organism=Clytia hemisphaerica|type=transcript|length=1401bp|location=Sequence derived from alignment at sc0006680:1..1401- (Clytia hemisphaerica)
GTGCTTCCTTGGGATGGGTTGCCACCTCGGAAATCCTATAATAAGGAAGA
CAACATCGAACGTAAGTGGAAAAATTCTATATTAATTTACAATCAAATAT
TAANNNNNNNNNNNNNNNNNNATCATTTTGGCCAGTGCTTCCTTGGGATG
GGTTGCCACCTCGGAAATCCTATAATAAGGAAGACAACATCGAACGTAAG
TGGAAAAATTCTATATTAATTTACAATCAAATATTAAATATTAAAACGTC
CTAAAGTTCTCTGATACCAGATCATTGAACCAAATAAATAAAATACTACA
AAAAAAAATTTTAATCGACAAATTCTAATCAAATTTTATATACAAATCTT
CATTTTATGATTCACTAATAACATTCTTGTTACAGTTCCTGATGGTTTTT
CTTCATTACTTTTCAGGGAATAAACTGAAGAACAACCCCGTAAGTCCGTC
CGAGCGTTGGGCTCAGATTAAAGCTGAGCAAGAAGAGCCTGATTGGGATG
ACGAATTGAATTGTTCGGAATTGTCGGATTCAGCCGAAGTGATTGAGTAG
CTCGGTAAGTTTTCATTTGTTTGCAATACTTCCGGCCATTGCTCATGTAC
GGGAGCTCCTCGTTGCAGTGGTTGAGGCGGTTTCTCATATCTCCACACCG
TAAACGCTCCGAATTTTTCTTTCCTCAATCCCATTCGACGAAGATAATCA
GCTCTGTATTCTTCTGTTGTCAAACGTATTAAGATATCTAGTCGGCGGTC
TTCTTCCCTGATATTGCTTGCTTCTTTGGGTGATCTTCTTTTAAGTCTTG
TCAAGATTATCTCACTGTGCATCCTTCCAAAATACGAAAGAATAAGTTGG
GGTTTTGTGTTTATTATATCCCTTTGCAGTTCGATACAGGGTGCTATCNN
NNNTTCTTTTAAGTCTTGTCAAGATTATCTCACTGTGCATCCTTCCAAAA
TACGAAAGAATAAGTTGGGGTTTTGTGTTTATTATATCCCTTTGCAGTTC
GATACAGGGTGCTATCTTCAGCTGTATAAATTGAAAGCGAATTCTTGTGA
TTGTGTCTTGATTGATCGCTCACCATGAGGACGACTCGTATTTTCTTTAA
CAGCATGGCCTGTTGCTTCTGTGACATAATTTTATCCATCTTGATTTCTA
GATTCACTCGTCCTGTCGCCAGAAGTAATTGAAAGCTGAGCGTGGACAAT
CGCAGCACCATCTTGTCAACCATCAGAATGTTGAACCGTGAAATATAATG
ATTTTTTGTTTCTTTTATACACCTCACAAAAATTTCGTTTGTTATTTCCT
TTCCTCCACAGCTTCCTTTGTTTCGTCACAATACATATAGTACAAACTTT
TGCGGTACTTCGGTTACCATGATTGCAACTCTTTTAAAATTAATGAGTCT
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045014-exon-sc0006680-1575043694:1207..1401 | TCONS_00045014-exon-sc0006680-1575043694:1207..1401 | Clytia hemisphaerica | exon |
| TCONS_00045014-exon-sc0006680-1575043694:1..985 | TCONS_00045014-exon-sc0006680-1575043694:1..985 | Clytia hemisphaerica | exon |
| TCONS_00045014-exon-sc0006680-1510915933:1207..1401 | TCONS_00045014-exon-sc0006680-1510915933:1207..1401 | Clytia hemisphaerica | exon |
| TCONS_00045014-exon-sc0006680-1510915933:1..985 | TCONS_00045014-exon-sc0006680-1510915933:1..985 | Clytia hemisphaerica | exon |
| TCONS_00045014-exon-sc0006680-1491911889:1207..1401 | TCONS_00045014-exon-sc0006680-1491911889:1207..1401 | Clytia hemisphaerica | exon |
| TCONS_00045014-exon-sc0006680-1491911889:1..985 | TCONS_00045014-exon-sc0006680-1491911889:1..985 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006680 | supercontig | sc0006680:1..1401 - |
Blast
The following BLAST results are available for this feature:
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