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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044699 ID=TCONS_00044699|Name=TCONS_00044699|organism=Clytia hemisphaerica|type=transcript|length=636bp
TTTTTAAACGTTAAGTACATTACAGGGCAATTTCGCAGCTTGAAGCCGAA
TTCCTTTATAAAATTTGCTAAATgtatcaaaaattttaactatTAAAAAG
TTTNTTGTCTTATGCCGTGAGTACTTTTTTAAACGTTAAGTACATTACAG
GGCAATTTCGCAGCTTGAAGCCGAATTCCTTTATAAAATTTGCTAAATgt
atcaaaaattttaactatTAAAAAGTACTTGGAAACATAGATGATAATGG
AAGCATCTTTAAATTTCCTTTTAGATGAGTATTCGATTATTGGGAGTAGT
TCTCGACTCGTTAACCGATAAAAATCCCGAGCACAACATTGAATGGTCGT
ACTATTTTTGTGAGGTTCCACGTATGTCTATCGAACTTTCACCTGAAATC
TTCAAGAAGAACCAAACTGATATACAGAACCTCAAGAATGTACTTGGTGC
GTCCGACCTCTTGATCAAGATTGATTGAATTGATTTCCATTCCTCATTTT
TTTGGTATCATGCATTCACATGTGTCGAAATTTTTTATGACACCGATTTC
CAAAGTGACAATTTTTAAGCCCCCTTCttaattgatatttttatccAGTT
TAGTTTTTTAGTGTTATACTCGTCTAATTTTTGTTG Run BLAST on NCBI transcript from alignment at sc0006033:26..2762+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044699 ID=TCONS_00044699|Name=TCONS_00044699|organism=Clytia hemisphaerica|type=transcript|length=2737bp|location=Sequence derived from alignment at sc0006033:26..2762+ (Clytia hemisphaerica)
TTTTTAAACGTTAAGTACATTACAGGGCAATTTCGCAGCTTGAAGCCGAA
TTCCTTTATAAAATTTGCTAAATgtatcaaaaattttaactatTAAAAAG
TTTNTTGTCTTATGCCGTGAGTACTTTTTTAAACGTTAAGTACATTACAG
GGCAATTTCGCAGCTTGAAGCCGAATTCCTTTATAAAATTTGCTAAATgt
atcaaaaattttaactatTAAAAAGTACTTGGAAACATAGATGATAATGG
AAGCATCTTTAAATTTCCTTTTAGATGAGTATTCGATTATTGGGAGTAGT
TCTCGACTCGTTAACCGATAAAAATCCCGAGCACAACATTGAATGGTAAG
AGTTTTGAACTTGTCTCGTGTGTTCATTCTCAAATATTCTTTTGGGTATG
TACGATATCTTGACAAATCAAGATTCTTTAATTTTTATCCAACATTCTCT
AGAAAcgaaaatcaattcaaaaaagATGCCTTCTCTTAGTCCTTTTCTGG
TACAACGCTTACCTTgtgtaaaatattgaaatggtaATTGATTCCGAGAG
Gagttcatataaaatttactaatcgcacgatgagttattttttcttcttt
ggcgcgccttcaaagagagcaattaacaaaaaaatcactcgtgcaattat
tctcaaattgcactcgttatcatgtgattagtactagtaatcgtatggtt
tggagtgcaattaacgattaatcacgagtaacaaaggagaaaataNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNgctattgtaacgtaaaatttctttgttc
ttttttatatcgaagaaaaaaaatgtctttgttttttattatatagtaaa
aaaagtctctgacacaagACTTaagagagaaaagaataaggggacaaaag
tgcccccccccgccgaagagtgcaaaaagtggtaatagtgcaattaacga
ttaattgcactcctctaaaccaatcagattcgagtaattttgcacggctg
acgattacatatactaatcacCTAagaaatggtttcaaaacgagtttgga
aactattctagtcgtgagttagggagttgctagtttcgagttggggagtt
aaaaaattaccggctaccgaaaaagaataacatacatcaaaagtacgatt
ttgaaagtaaatgtaatatgagagtaatatataacacatataatacgtat
aatacatataccacctgtaatatgcttaattgccttaaacacgtgcgctg
agagcatggaaagctattttctactgtcaattcatatccatttatatttc
ctgcatcacattgagtataaatataattcttgattaaagtgactttggaa
ccattgtattttataatatgatcaaaatttttattaaaaagtgtcaattc
caatgataaaatgacaaaagaaagtgtcattatttttctagctctataag
ctatctctacgaattttttgaggctaagatgactgtcaacttatatccta
ttatacaataagcatcacttgcaatataatcaatattttttggggaattt
gtttgacaatcattgtatttaaagattttgtcaatatttttacaagaacg
tgtcatgttgtcagcattatgacgatgacataacagtactaagtattttg
gctttgctagccagcaccttaccattttcatgtttagtactggctaattt
gaaatttgtacttttgggctacattagtttgaattagaaaattttcggtc
gccgtaaagtttcacgaactccccaactcgaaactagcaacttcccaact
ccccaactcaccaactagaacattacctagactcTTTCAAAACGAGGAAG
tagttgcactcaaaataattcgTGAAAAGGCTATTTCGAAAGGTGTTCCG
TATTGACCAGCAATCAATATGTTTATCTAAATTTTCACTTCTTTAGGTCG
TACTATTTTTGTGAGGTTCCACGTATGTCTATCGAACTTTCACCTGAAAT
CTTCAAGAAGAACCAAACTGATATACAGAACCTCAAGAATGTACTTGGTG
CGTCCGACCTCTTGATCAAGATTGATTGAATTGATTTCCATTCCTCATTT
TTTTGGTATCATGCATTCACATGTGTCGAAATTTTTTATGACACCGATTT
CCAAAGTGACAATTTTTAAGCCCCCTTCttaattgatatttttatccAGT
TTAGTTTTTTAGTGTTATACTCGTCTAATTTTTGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044699-exon-sc0006033-1491911889:26..370 | TCONS_00044699-exon-sc0006033-1491911889:26..370 | Clytia hemisphaerica | exon |
| TCONS_00044699-exon-sc0006033-1510915933:26..370 | TCONS_00044699-exon-sc0006033-1510915933:26..370 | Clytia hemisphaerica | exon |
| TCONS_00044699-exon-sc0006033-1575043694:26..370 | TCONS_00044699-exon-sc0006033-1575043694:26..370 | Clytia hemisphaerica | exon |
| TCONS_00044699-exon-sc0006033-1491911889:2472..2762 | TCONS_00044699-exon-sc0006033-1491911889:2472..2762 | Clytia hemisphaerica | exon |
| TCONS_00044699-exon-sc0006033-1510915933:2472..2762 | TCONS_00044699-exon-sc0006033-1510915933:2472..2762 | Clytia hemisphaerica | exon |
| TCONS_00044699-exon-sc0006033-1575043694:2472..2762 | TCONS_00044699-exon-sc0006033-1575043694:2472..2762 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006033 | supercontig | sc0006033:26..2762 + |
Blast
The following BLAST results are available for this feature:
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