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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044635 ID=TCONS_00044635|Name=TCONS_00044635|organism=Clytia hemisphaerica|type=transcript|length=1600bp
aTGGACTCCCGTCAAGCAATCATAACCATGTTCCTGTTAAATTTTCTCTT
GGGTGTATCAAACGGAGTTAAAGAGAAACTAATACCCAATTTTGAGccaa
aaccagataaaaatggCAAGAGCACGTATGTAAATTTAAAGAATTACCTT
GTTGATTCATCTAACAcgaataaaaaagtttcagtAGACCAGGGTTTGAT
TGAGCAAAGTTTGAAAACATTTCTTGACAAGCATGGTGATGGATCTTATG
GCGTGTTTGAGGGCTTAACAAAAGGTGGCGAACTTAAAAGTTGGATTGCC
GGTATAGTTTCTGCGTCTTCAAATGTAGCTGGCGGCTTGGAAAAGATATC
TTCTTCTTTTGCTGTGGTAAGCCCAGTAGCAGGTGTAGCCTCGTGGATTT
TTGGTCTTATAGGCTCGATTAAACAAACaaaagaacataaagctttCGTT
GAAGATATTCACAAGAACTTCCAACTGCTTAGTAAAAGAATCAACTCACA
ATATGAGGAGCTTAAAAATTATGTCGATGAAAGTGTCATTGCAATCGATC
ATGAGCGCTTATATGGGGAACTAAGTCAAATGCAAGGAAATCTTGCAGAT
TGTCTCTTGCATAAAGAAGGATTTTGGAGAAAGAATTGTATAAATTATCG
ATGCAGCGATGTCAAGTCCAGTTTCAAGAAGTTTGCTCTCTTTGCTGATA
AacttaatttaattgaaaaacaaaaaacaatggaattaagTGATTGGGAA
ACAAAAGCTAGTTTGgcatacaaaaataaaaaggacTCTTCATGGTCCAC
ACAAGAAATTGTGCGTGTTTTTGCTAATCTTCGAATGTTTCATAATTATG
TATTGAGTGTTTTAGGTTACTGTGAAGCTCAGCGAGCGCTCAGAAGAGAC
GGAAAAAAATTAAGCAGTGGTTATGATGGCTCGACAACTTATTTCGGAAG
TAAAATAAGTTCAGAATTGAACGACTGGAGTGTAAGAGATGAAGTATACA
TGTATCTTGTAAACAGCATGCATTTGATATATCACGCACACAAATCGGAT
CCCGAATTGATCGATGTAGGTTGGACAAAGCAGGAGACGAAGAAAGGCTG
GTTTTCCTGCTTCAAATGTGGACCAAAACGTGCAAGAAAGGTACAATGCC
GTTATCAAATGAATTCTCATTTCCGAGAATTTCGCGACGTTGAATATACC
GAATATGCCAACAGTATGGATGAAAAGCGAGCCCGGGCGAGATGCATCAA
CGGAATGGATAATGAGAAATTAAAATACGATCATGATCTCGATGAGAAAG
TGGTCAGAAGCTATATAAAAATAGATGAAATTGACAAATtcctcaaaaat
gtttttaagggACCGTTGATTTTTAAGAAGAAAGATAATTCAGGTGCAAT
AATGTCGATCAAGAATTGATCACATCAAATCTGGTATCTTTTTCTCCATA
TTTTGTTCTAACCGAAAATTTCACATAGGGACATCGAGAGACAGAGATAT
GATATACAATATATAAAGTCCTTGCAGTACACGATTTATTCAtaagaata
tattttttaaagaaattcaccattaaattggccaaaaaaaataagaatac Run BLAST on NCBI protein sequence of TCONS_00044635-protein >TCONS_00044635-protein ID=TCONS_00044635-protein|Name=TCONS_00044635-protein|organism=Clytia hemisphaerica|type=polypeptide|length=472bp
MDSRQAIITMFLLNFLLGVSNGVKEKLIPNFEPKPDKNGKSTYVNLKNYL
VDSSNTNKKVSVDQGLIEQSLKTFLDKHGDGSYGVFEGLTKGGELKSWIA
GIVSASSNVAGGLEKISSSFAVVSPVAGVASWIFGLIGSIKQTKEHKAFV
EDIHKNFQLLSKRINSQYEELKNYVDESVIAIDHERLYGELSQMQGNLAD
CLLHKEGFWRKNCINYRCSDVKSSFKKFALFADKLNLIEKQKTMELSDWE
TKASLAYKNKKDSSWSTQEIVRVFANLRMFHNYVLSVLGYCEAQRALRRD
GKKLSSGYDGSTTYFGSKISSELNDWSVRDEVYMYLVNSMHLIYHAHKSD
PELIDVGWTKQETKKGWFSCFKCGPKRARKVQCRYQMNSHFREFRDVEYT
EYANSMDEKRARARCINGMDNEKLKYDHDLDEKVVRSYIKIDEIDKFLKN
VFKGPLIFKKKDNSGAIMSIKN Run BLAST on NCBI transcript from alignment at sc0005912:419..2018 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044635 ID=TCONS_00044635|Name=TCONS_00044635|organism=Clytia hemisphaerica|type=transcript|length=1600bp|location=Sequence derived from alignment at sc0005912:419..2018 (Clytia hemisphaerica)
gtattcttattttttttggccaatttaatggtgaatttctttaaaaaata
tattcttaTGAATAAATCGTGTACTGCAAGGACTTTATATATTGTATATC
ATATCTCTGTCTCTCGATGTCCCTATGTGAAATTTTCGGTTAGAACAAAA
TATGGAGAAAAAGATACCAGATTTGATGTGATCAATTCTTGATCGACATT
ATTGCACCTGAATTATCTTTCTTCTTAAAAATCAACGGTcccttaaaaac
atttttgaggaATTTGTCAATTTCATCTATTTTTATATAGCTTCTGACCA
CTTTCTCATCGAGATCATGATCGTATTTTAATTTCTCATTATCCATTCCG
TTGATGCATCTCGCCCGGGCTCGCTTTTCATCCATACTGTTGGCATATTC
GGTATATTCAACGTCGCGAAATTCTCGGAAATGAGAATTCATTTGATAAC
GGCATTGTACCTTTCTTGCACGTTTTGGTCCACATTTGAAGCAGGAAAAC
CAGCCTTTCTTCGTCTCCTGCTTTGTCCAACCTACATCGATCAATTCGGG
ATCCGATTTGTGTGCGTGATATATCAAATGCATGCTGTTTACAAGATACA
TGTATACTTCATCTCTTACACTCCAGTCGTTCAATTCTGAACTTATTTTA
CTTCCGAAATAAGTTGTCGAGCCATCATAACCACTGCTTAATTTTTTTCC
GTCTCTTCTGAGCGCTCGCTGAGCTTCACAGTAACCTAAAACACTCAATA
CATAATTATGAAACATTCGAAGATTAGCAAAAACACGCACAATTTCTTGT
GTGGACCATGAAGAgtcctttttatttttgtatgcCAAACTAGCTTTTGT
TTCCCAATCActtaattccattgttttttgtttttcaattaaattaagtT
TATCAGCAAAGAGAGCAAACTTCTTGAAACTGGACTTGACATCGCTGCAT
CGATAATTTATACAATTCTTTCTCCAAAATCCTTCTTTATGCAAGAGACA
ATCTGCAAGATTTCCTTGCATTTGACTTAGTTCCCCATATAAGCGCTCAT
GATCGATTGCAATGACACTTTCATCGACATAATTTTTAAGCTCCTCATAT
TGTGAGTTGATTCTTTTACTAAGCAGTTGGAAGTTCTTGTGAATATCTTC
AACGaaagctttatgttcttttGTTTGTTTAATCGAGCCTATAAGACCAA
AAATCCACGAGGCTACACCTGCTACTGGGCTTACCACAGCAAAAGAAGAA
GATATCTTTTCCAAGCCGCCAGCTACATTTGAAGACGCAGAAACTATACC
GGCAATCCAACTTTTAAGTTCGCCACCTTTTGTTAAGCCCTCAAACACGC
CATAAGATCCATCACCATGCTTGTCAAGAAATGTTTTCAAACTTTGCTCA
ATCAAACCCTGGTCTactgaaacttttttattcgTGTTAGATGAATCAAC
AAGGTAATTCTTTAAATTTACATACGTGCTCTTGccatttttatctggtt
ttggCTCAAAATTGGGTATTAGTTTCTCTTTAACTCCGTTTGATACACCC
AAGAGAAAATTTAACAGGAACATGGTTATGATTGCTTGACGGGAGTCCAt
Coding sequence (CDS) from alignment at sc0005912:419..2018 >TCONS_00044635 ID=TCONS_00044635|Name=TCONS_00044635|organism=Clytia hemisphaerica|type=CDS|length=1419bp|location=Sequence derived from alignment at sc0005912:419..2018 (Clytia hemisphaerica)
TCAATTCTTGATCGACATTATTGCACCTGAATTATCTTTCTTCTTAAAAA
TCAACGGTcccttaaaaacatttttgaggaATTTGTCAATTTCATCTATT
TTTATATAGCTTCTGACCACTTTCTCATCGAGATCATGATCGTATTTTAA
TTTCTCATTATCCATTCCGTTGATGCATCTCGCCCGGGCTCGCTTTTCAT
CCATACTGTTGGCATATTCGGTATATTCAACGTCGCGAAATTCTCGGAAA
TGAGAATTCATTTGATAACGGCATTGTACCTTTCTTGCACGTTTTGGTCC
ACATTTGAAGCAGGAAAACCAGCCTTTCTTCGTCTCCTGCTTTGTCCAAC
CTACATCGATCAATTCGGGATCCGATTTGTGTGCGTGATATATCAAATGC
ATGCTGTTTACAAGATACATGTATACTTCATCTCTTACACTCCAGTCGTT
CAATTCTGAACTTATTTTACTTCCGAAATAAGTTGTCGAGCCATCATAAC
CACTGCTTAATTTTTTTCCGTCTCTTCTGAGCGCTCGCTGAGCTTCACAG
TAACCTAAAACACTCAATACATAATTATGAAACATTCGAAGATTAGCAAA
AACACGCACAATTTCTTGTGTGGACCATGAAGAgtcctttttatttttgt
atgcCAAACTAGCTTTTGTTTCCCAATCActtaattccattgttttttgt
ttttcaattaaattaagtTTATCAGCAAAGAGAGCAAACTTCTTGAAACT
GGACTTGACATCGCTGCATCGATAATTTATACAATTCTTTCTCCAAAATC
CTTCTTTATGCAAGAGACAATCTGCAAGATTTCCTTGCATTTGACTTAGT
TCCCCATATAAGCGCTCATGATCGATTGCAATGACACTTTCATCGACATA
ATTTTTAAGCTCCTCATATTGTGAGTTGATTCTTTTACTAAGCAGTTGGA
AGTTCTTGTGAATATCTTCAACGaaagctttatgttcttttGTTTGTTTA
ATCGAGCCTATAAGACCAAAAATCCACGAGGCTACACCTGCTACTGGGCT
TACCACAGCAAAAGAAGAAGATATCTTTTCCAAGCCGCCAGCTACATTTG
AAGACGCAGAAACTATACCGGCAATCCAACTTTTAAGTTCGCCACCTTTT
GTTAAGCCCTCAAACACGCCATAAGATCCATCACCATGCTTGTCAAGAAA
TGTTTTCAAACTTTGCTCAATCAAACCCTGGTCTactgaaacttttttat
tcgTGTTAGATGAATCAACAAGGTAATTCTTTAAATTTACATACGTGCTC
TTGccatttttatctggttttggCTCAAAATTGGGTATTAGTTTCTCTTT
AACTCCGTTTGATACACCCAAGAGAAAATTTAACAGGAACATGGTTATGA
TTGCTTGACGGGAGTCCAt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044635-exon-sc0005912-1491911889:419..2018 | TCONS_00044635-exon-sc0005912-1491911889:419..2018 | Clytia hemisphaerica | exon |
| TCONS_00044635-exon-sc0005912-1510915933:419..2018 | TCONS_00044635-exon-sc0005912-1510915933:419..2018 | Clytia hemisphaerica | exon |
| TCONS_00044635-exon-sc0005912-1575043694:419..2018 | TCONS_00044635-exon-sc0005912-1575043694:419..2018 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005912 | supercontig | sc0005912:419..2018 . |
Blast
The following BLAST results are available for this feature:
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