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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044501 ID=TCONS_00044501|Name=TCONS_00044501|organism=Clytia hemisphaerica|type=transcript|length=1475bp
ACATCTATATAGACGAGGTTAGGTCCACGGCAGATTGAATTATAAATCTT
ATCGAATTACGTATCGTTTGCAGCGTCGGTGGCACAGGGGATATAGAGTT
AGCACAAGCTTATTACTGTTTTTACAAGTGTGAGTTCGAACCCCAGGAAA
GTCACAAGTTTTCAAAAAGCTGGAGAGAGATCTTATAGCACAATGCTTCC
ATTTTCGCATTTTCAGTGCTACAGAGACACAAACATGACAATAAATAAAC
AGGAAATTAGTCTTAGAAATGGATCAACACAACAGGAAATTAGTCTTAGA
AATGGatcaaaaaacaaatcaaaagatGCAGGTAAGATACAAGAACCTCT
GATTGACACAGTACAGTCAGCCAAATGGATTTATAAACTTCTGAATAGCT
AATATCTAATGCTTTTTAATGAGATGGAAAAAAAAGATGAAGACAGATCT
TTACATTCTAAAGTAGAAAAAGAATGTATAAtgtagaaaaactttcaaat
gaaATGGACAAGTAACTTTACAGCAAAATTAGTTAAAAGAAGCATCTCAA
TTTGTGataattttatttacaaaatgtTTCAATGGATGCTATATTAGCTA
CAAATCATAGGGGGGATGGGGAAAGGGAAAGGTATGAGAGGTTTTTTGAA
TGCGGTCGAACAGAGGATAGTTCAGTCATTTGacggctatgcaagtttcc
ctccactgatgcaactTGTCTTAACGGTATAAATTGGAACCCCGGATGAT
GTAATTTCAATTCAACTTGGAATTAAGGTAGCTAAGGTCCAGGGGATGAT
GTCAACCAAATCCTATCGAAATCAAACCAATTTTCTTAATCGAACCATCG
CTCCAACTCAATCGAACTTATATAATGGAAAGGATACCTACTGAATAtga
tcgttcacgggtttctcgaatattcaggcccagaaaaggaagaagaagaa
aatgggaaaacaTATGACATATTTCTgttccgagaactcctagatgacat
caatgttccagaaataaATGTTACACATCACAGATTAGGAGACAGAAAAA
CAAGGAATGACCGTCCTCTGAAAGTCACCCTGCAAAGTCAACATGATAAA
GATCTTATCATGTCATGAAGAATTTACATGtgctaaaagaaacttgtttc
tttcaggttTAAGTATAACGGAAGTTTTCACAATCAACGAACAGAAAAAG
ATCAAGGAGATGCACAAACAAGCGAAGaaactcaataaaaacaataacaa
taaaggattcaactggtgcgtaagaggaagcccaagaacaaaactacgca
tcgttaaaaaattacacgGTATCTTGATTAGTTTAATTAAAACTCAGTTT
GGTGTTGTTCAATTTACACTAATAGCTGATTTAAAATAGCTGATTGGAAc
ttattttctttgctttgcaATTATAAGTTGAGGAGTCCATCAGTGATATC
GACTTTCCTATTGTCTCTAAAGAAN Run BLAST on NCBI transcript from alignment at sc0005691:1565..3039 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044501 ID=TCONS_00044501|Name=TCONS_00044501|organism=Clytia hemisphaerica|type=transcript|length=1475bp|location=Sequence derived from alignment at sc0005691:1565..3039 (Clytia hemisphaerica)
NTTCTTTAGAGACAATAGGAAAGTCGATATCACTGATGGACTCCTCAACT
TATAATtgcaaagcaaagaaaataagTTCCAATCAGCTATTTTAAATCAG
CTATTAGTGTAAATTGAACAACACCAAACTGAGTTTTAATTAAACTAATC
AAGATACcgtgtaattttttaacgatgcgtagttttgttcttgggcttcc
tcttacgcaccagttgaatcctttattgttattgtttttattgagtttCT
TCGCTTGTTTGTGCATCTCCTTGATCTTTTTCTGTTCGTTGATTGTGAAA
ACTTCCGTTATACTTAaacctgaaagaaacaagtttcttttagcaCATGT
AAATTCTTCATGACATGATAAGATCTTTATCATGTTGACTTTGCAGGGTG
ACTTTCAGAGGACGGTCATTCCTTGTTTTTCTGTCTCCTAATCTGTGATG
TGTAACATttatttctggaacattgatgtcatctaggagttctcggaacA
GAAATATGTCATAtgttttcccattttcttcttcttccttttctgggcct
gaatattcgagaaacccgtgaacgatcaTATTCAGTAGGTATCCTTTCCA
TTATATAAGTTCGATTGAGTTGGAGCGATGGTTCGATTAAGAAAATTGGT
TTGATTTCGATAGGATTTGGTTGACATCATCCCCTGGACCTTAGCTACCT
TAATTCCAAGTTGAATTGAAATTACATCATCCGGGGTTCCAATTTATACC
GTTAAGACAagttgcatcagtggagggaaacttgcatagccgtCAAATGA
CTGAACTATCCTCTGTTCGACCGCATTCAAAAAACCTCTCATACCTTTCC
CTTTCCCCATCCCCCCTATGATTTGTAGCTAATATAGCATCCATTGAAac
attttgtaaataaaattatCACAAATTGAGATGCTTCTTTTAACTAATTT
TGCTGTAAAGTTACTTGTCCATttcatttgaaagtttttctacaTTATAC
ATTCTTTTTCTACTTTAGAATGTAAAGATCTGTCTTCATCTTTTTTTTCC
ATCTCATTAAAAAGCATTAGATATTAGCTATTCAGAAGTTTATAAATCCA
TTTGGCTGACTGTACTGTGTCAATCAGAGGTTCTTGTATCTTACCTGCat
cttttgatttgttttttgatCCATTTCTAAGACTAATTTCCTGTTGTGTT
GATCCATTTCTAAGACTAATTTCCTGTTTATTTATTGTCATGTTTGTGTC
TCTGTAGCACTGAAAATGCGAAAATGGAAGCATTGTGCTATAAGATCTCT
CTCCAGCTTTTTGAAAACTTGTGACTTTCCTGGGGTTCGAACTCACACTT
GTAAAAACAGTAATAAGCTTGTGCTAACTCTATATCCCCTGTGCCACCGA
CGCTGCAAACGATACGTAATTCGATAAGATTTATAATTCAATCTGCCGTG
GACCTAACCTCGTCTATATAGATGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044501-exon-sc0005691-1491911889:1565..3039 | TCONS_00044501-exon-sc0005691-1491911889:1565..3039 | Clytia hemisphaerica | exon |
| TCONS_00044501-exon-sc0005691-1510915933:1565..3039 | TCONS_00044501-exon-sc0005691-1510915933:1565..3039 | Clytia hemisphaerica | exon |
| TCONS_00044501-exon-sc0005691-1575043694:1565..3039 | TCONS_00044501-exon-sc0005691-1575043694:1565..3039 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005691 | supercontig | sc0005691:1565..3039 . |
Blast
The following BLAST results are available for this feature:
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