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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044439 ID=TCONS_00044439|Name=TCONS_00044439|organism=Clytia hemisphaerica|type=transcript|length=1262bp
GGTTGTCCTCAGAAATTCTGCTCAGGTTGTTTCAGCATAGTGAATATGAG
TTGGATTGAATATAATCACAGGACATAATAAATTGATCAAGCGCACACAG
TGTGTCTGATGAAACAGCttcaattattttcacctttccTCAGAAATTCT
GCTCAGGTTGTTTCATCATAATGATTAAGAGTTGGATTGAATATAATCAT
CAGAAAGTGTTGAGACAGAGCCAATAAACTAGGtaatcccttattttcaa
aaggtttTAACCACGAGTATTTATTAAATAGTcggtgcgcaacgcactgg
gcttaacttcagtggcttcaaattattcataggcccgattgtagaccccc
agatattcacccaaggaacaattgtgcaaaattttagccaaatccgacca
tttttgaagtctccaggctgccccaaagttttagcctcgttttggcaaaa
aacttgTCCCAGgcccaaaatcaaaattttcaaaaaatgaaaaaaaaaca
cccccagaatTCATCCAAGGAACAAacaagaaaaagtgccctttgtGGCC
ACCAATGgacgctgccctgcctttctaaaatatcgCCTGAAgcgtgccaa
atttcagccaaatccaaccatttttaaGGTCTCCGTCTGCCTTAAAGTTT
TTGTgtcagacagacagacacacacacagaaattgtcagattgtagctca
actgaagttgagaattcaTCATTAAGATAAGCCAAAGTTGTCCTCAGAGA
TTCTGCTCAGGTTGTTTCAGCATAATGAATATGAGTTGGATTGAATATAA
TCAAAGGACAACCTTTTCTATCATGGGGAAACAATATAGGTTTTGGGCTA
AACAGCTAAAATAATTTTCCATTTTCCTCAGAAATTCTGCTCAGGTTGTT
TCATCATAATGATTAAGAGTTGGATTGAATATAATCATAGGAAAGTGGTG
AgacaaaatcaatgaaaaaggaCAATCCCTTATTTTAATTGGCCATTTCT
ATGAGAATAAGATAATATATCATCTAAGTTAAGCAATACTGTCCTCATAA
ATTGTTGTTTCAGCACAATGAAGAGTATGAGTTGGATTGAATATAATCAT
TGGACAAAGATGACGAccttaacaaaaattaccttAACAATCATAGAATG
CAccccctgagcttagggggAGGGGGCTAatccatttttgcttgattggg
ggctgtattaattaaaaaatactggggctagcttgctaggcATGGCGTCC
TGCAGCTTTTTG Run BLAST on NCBI transcript from alignment at sc0005578:2..1328+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044439 ID=TCONS_00044439|Name=TCONS_00044439|organism=Clytia hemisphaerica|type=transcript|length=1327bp|location=Sequence derived from alignment at sc0005578:2..1328+ (Clytia hemisphaerica)
GGTTGTCCTCAGAAATTCTGCTCAGGTTGTTTCAGCATAGTGAATATGAG
TTGGATTGAATATAATCACAGGACATAATAAATTGATCAAGCGCACACAG
TGTGTCTGATGAAACAGCttcaattattttcacctttccTCAGAAATTCT
GCTCAGGTTGTTTCATCATAATGATTAAGAGTTGGATTGAATATAATCAT
CAGAAAGTGTTGAGACAGAGCCAATAAACTAGGtaatcccttattttcaa
aaggtttTAACCACGAGTATTTATTAAATAGTcggtgcgcaacgcactgg
gcttaacttcagtggcttcaaattattcataggcccgattgtagaccccc
agatattcacccaaggaacaattgtgcaaaattttagccaaatccgacca
tttttgaagtctccaggctgccccaaagttttagcctcgttttggcaaaa
aacttgTCCCAGgcccaaaatcaaaattttcaaaaaatgaaaaaaaaaca
cccccagaatTCATCCAAGGAACAAacaagaaaaagtgccctttgtGGCC
ACCAATGgacgctgccctgcctttctaaaatatcgCCTGAAgcgtgccaa
atttcagccaaatccaaccatttttaaGGTCTCCGTCTGCCTTAAAGTTT
TTGTgtcagacagacagacacacacacagaaattgtcagattgtagctca
actgaagttgagaattcaTCATTAAGATAAGCCAAAGTTGTCCTCAGAGA
TTCTGCTCAGGTTGTTTCAGCATAATGAATATGAGTTGGATTGAATATAA
TCAAAGGACAACCTTTTCTATCATGGGGAAACAATATAGGTTTTGGGCTA
AACAGCTAAAATAATTTTCCATTTTCCTCAGAAATTCTGCTCAGGTTGTT
TCATNTTTTGGGCTAAACAGCTAAAATAATTTTCCATTTTCCTCAGAAAT
TCTGCTCAGGTTGTTTCATCATAATGATTAAGAGTTGGATTGAATATAAT
CATAGGAAAGTGGTGAgacaaaatcaatgaaaaaggaCAATCCCTTATTT
TAATTGGCCATTTCTATGAGAATAAGATAATATATCATCTAAGTTAAGCA
ATACTGTCCTCATAAATTGTTGTTTCAGCACAATGAAGAGTATGAGTTGG
ATTGAATATAATCATTGGACAAAGATGACGAccttaacaaaaattacctt
AACAATCATAGAATGCAccccctgagcttagggggAGGGGGCTAatccat
ttttgcttgattgggggctgtattaattaaaaaatactggggctagcttg
ctaggcATGGCGTCCTGCAGCTTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044439-exon-sc0005578-1491911889:2..895 | TCONS_00044439-exon-sc0005578-1491911889:2..895 | Clytia hemisphaerica | exon |
| TCONS_00044439-exon-sc0005578-1510915933:2..895 | TCONS_00044439-exon-sc0005578-1510915933:2..895 | Clytia hemisphaerica | exon |
| TCONS_00044439-exon-sc0005578-1575043694:2..895 | TCONS_00044439-exon-sc0005578-1575043694:2..895 | Clytia hemisphaerica | exon |
| TCONS_00044439-exon-sc0005578-1491911889:961..1328 | TCONS_00044439-exon-sc0005578-1491911889:961..1328 | Clytia hemisphaerica | exon |
| TCONS_00044439-exon-sc0005578-1510915933:961..1328 | TCONS_00044439-exon-sc0005578-1510915933:961..1328 | Clytia hemisphaerica | exon |
| TCONS_00044439-exon-sc0005578-1575043694:961..1328 | TCONS_00044439-exon-sc0005578-1575043694:961..1328 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005578 | supercontig | sc0005578:2..1328 + |
Blast
The following BLAST results are available for this feature:
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