TCONS_00044425 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044425
Unique NameTCONS_00044425
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044425 ID=TCONS_00044425|Name=TCONS_00044425|organism=Clytia hemisphaerica|type=transcript|length=120bp
GGTGAGTGAATATTGATTTACACTGTCTGTGAAGAAGCGTTTATACATTA
CGTTCATACATGAAGATACATACAGAAGATGGATTGTGAATTACactttc
acacgcatgtgattttttgc
Run BLAST on NCBI

transcript from alignment at sc0005552:4103..4222

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044425 ID=TCONS_00044425|Name=TCONS_00044425|organism=Clytia hemisphaerica|type=transcript|length=120bp|location=Sequence derived from alignment at sc0005552:4103..4222 (Clytia hemisphaerica)
gcaaaaaatcacatgcgtgtgaaagtGTAATTCACAATCCATCTTCTGTA
TGTATCTTCATGTATGAACGTAATGTATAAACGCTTCTTCACAGACAGTG
TAAATCAATATTCACTCACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028057XLOC_028057Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044425-exon-sc0005552-1491911889:4103..4222TCONS_00044425-exon-sc0005552-1491911889:4103..4222Clytia hemisphaericaexon
TCONS_00044425-exon-sc0005552-1510915933:4103..4222TCONS_00044425-exon-sc0005552-1510915933:4103..4222Clytia hemisphaericaexon
TCONS_00044425-exon-sc0005552-1575043694:4103..4222TCONS_00044425-exon-sc0005552-1575043694:4103..4222Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005552supercontigsc0005552:4103..4222 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044425 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top