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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044418 ID=TCONS_00044418|Name=TCONS_00044418|organism=Clytia hemisphaerica|type=transcript|length=1201bp
agcattcttaggttaggatcaatgcagactagatttaacatttagtacac
acttctcaagcataaaatggcatttttgtgaaaggagtgggccttacttg
ggggtgattgacaatttataactgaaaattctcTAAAATTAGCATTCTTA
Gcggagtagcaaaattccatgacggtgatattcttagcattattcttaat
tttttggccattttcatcatggacattattataaagtgtattcttataaa
aaagcgtgtattcggCCTTAACCTTTAAAGGAGTTGTGTTGagcggtgaa
aaagaatgcggttattatattttgatattcCCTCTAAAAGTGTTGGTGTG
TATCTGTTTGTATTTCAGAATCACTGAACGCACCTCTCCCCACGCTATTA
GAGATATGTTCGTATAGAAAAGTAAACTGTAACGGGTTGCCGAAAAGTGC
AAAATCTATGATAATGTTTGGAAAAATTTATTGTATAATNGTAAACTGTA
ACGGGTTGCCGAAAAGTGCAAAATCTATGATAATGTTTGGAAAAATTTAT
TGTATAATTTTTCTGTTAATCATAATTTTCCTAATTTTCCTAAATTCTTG
CATTTTCCCAATGTATAGCCTTAGCACTGTAGTCTATATTTTGAGCCCCT
GGGAGCCCCTCAAGAACCATTACGTCACGTGGATCAAGCACCCTCGTATC
ATCTACTTCAAATGAAACATACGCCAAATAATCCTTTCGAAATACCTAAA
AGATCCAATCCCAATGGGGAATGTCATAACAGTCAAAACAattcatcccc
actgaaaaatcaatagaaaaaaACGCCTTCAAAATTATCCAAACTGACTT
TCCAGTACTGTACTAGggtaaaaaaagattaaatatcTTCGGGGGCCCCC
TTAATGGAAAATTTATTTCCCAGTAGTTAAAAAAGGTCCACCAAAGCACT
GAGATAGGGGTTTTCGGCATTTACTTCGAAAAGCAGTCGAAGCAGGCCCG
GCGGGAGCAGGGAGACTGGgaagacttcagcctccccaccagtggcgtgg
tggcagggggggccaggcccccccagcggagcccttttgagaaggggcgc
ccaaaaataagggacgTTAAGAAGGATTTTTtaggcgcccatatcgaaag
attgacaaatgaaaaaacaaaaatggcgcccctcatcacctcaaaaactc
a Run BLAST on NCBI transcript from alignment at sc0005540:3..1203 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044418 ID=TCONS_00044418|Name=TCONS_00044418|organism=Clytia hemisphaerica|type=transcript|length=1201bp|location=Sequence derived from alignment at sc0005540:3..1203 (Clytia hemisphaerica)
tgagtttttgaggtgatgaggggcgccatttttgttttttcatttgtcaa
tctttcgatatgggcgcctaAAAAATCCTTCTTAAcgtcccttatttttg
ggcgccccttctcaaaagggctccgctgggggggcctggccccccctgcc
accacgccactggtggggaggctgaagtcttcCCAGTCTCCCTGCTCCCG
CCGGGCCTGCTTCGACTGCTTTTCGAAGTAAATGCCGAAAACCCCTATCT
CAGTGCTTTGGTGGACCTTTTTTAACTACTGGGAAATAAATTTTCCATTA
AGGGGGCCCCCGAAgatatttaatctttttttaccCTAGTACAGTACTGG
AAAGTCAGTTTGGATAATTTTGAAGGCGTttttttctattgatttttcag
tggggatgaatTGTTTTGACTGTTATGACATTCCCCATTGGGATTGGATC
TTTTAGGTATTTCGAAAGGATTATTTGGCGTATGTTTCATTTGAAGTAGA
TGATACGAGGGTGCTTGATCCACGTGACGTAATGGTTCTTGAGGGGCTCC
CAGGGGCTCAAAATATAGACTACAGTGCTAAGGCTATACATTGGGAAAAT
GCAAGAATTTAGGAAAATTAGGAAAATTATGATTAACAGAAAAATTATAC
AATAAATTTTTCCAAACATTATCATAGATTTTGCACTTTTCGGCAACCCG
TTACAGTTTACNATTATACAATAAATTTTTCCAAACATTATCATAGATTT
TGCACTTTTCGGCAACCCGTTACAGTTTACTTTTCTATACGAACATATCT
CTAATAGCGTGGGGAGAGGTGCGTTCAGTGATTCTGAAATACAAACAGAT
ACACACCAACACTTTTAGAGGgaatatcaaaatataataaccgcattctt
tttcaccgctCAACACAACTCCTTTAAAGGTTAAGGccgaatacacgctt
ttttataagaatacactttataataatgtccatgatgaaaatggccaaaa
aattaagaataatgctaagaatatcaccgtcatggaattttgctactccg
CTAAGAATGCTAATTTTAgagaattttcagttataaattgtcaatcaccc
ccaagtaaggcccactcctttcacaaaaatgccattttatgcttgagaag
tgtgtactaaatgttaaatctagtctgcattgatcctaacctaagaatgc
t
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044418-exon-sc0005540-1491911889:3..1203 | TCONS_00044418-exon-sc0005540-1491911889:3..1203 | Clytia hemisphaerica | exon |
| TCONS_00044418-exon-sc0005540-1510915933:3..1203 | TCONS_00044418-exon-sc0005540-1510915933:3..1203 | Clytia hemisphaerica | exon |
| TCONS_00044418-exon-sc0005540-1575043694:3..1203 | TCONS_00044418-exon-sc0005540-1575043694:3..1203 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005540 | supercontig | sc0005540:3..1203 . |
Blast
The following BLAST results are available for this feature:
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