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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044384 ID=TCONS_00044384|Name=TCONS_00044384|organism=Clytia hemisphaerica|type=transcript|length=1128bp
CCAACAAACACTGATGAGATAAGCTCTTCTCGGCGTGCTACGTGATCGAC
TTCCAGAGTAAACCGTCGTTTGCGTATTGTTGTAGAGATGGTACGCCGCA
GTACAGCCTTTGTCATGTTCCAAGAATCGAATTCGTATCGATTCAACCGT
TTTGTCTGAAAAATTTTACCCGATTAGTTTGAGATGACCCTTCCCATGTT
CAGTGATCCGATCAGATCCGCCCCGGTGGATAATCATCCGGTGAAAATGA
CTGCAAAAATTTGCCTTATTTTAAGCCCCGGTAgaaaatgaattgaaatt
taCTATCCCAATCAAAACAGGGAAATTTAATCGAATGTAAGGTCTTACCC
TGCTCAATAATCGTATCAATAAGGTCATACCCGGtcaaaaaaaacaagat
ttCAATGAACTCCAAGAAAACCAGACTCGCTAACCTTACACCGGTGGAAA
TTGAGTTAAATTCTCACCCTGTGaggttgagttttttttttcgaaggcAA
CCCCCGGTGGATTTCAAAACTTTGCCGGGTCACTGACAGGGTAGGCTGTA
CTGAGACCTGCGTGATATCTACTGCTAGTTTCACTTCCATACGATTTGAA
GCATCCCCACTGGAGTCTTATCCCAgggggggcactccaggtaagtgatC
TACGGAACGCGCGGCCCTTAAGGGtttgttttttggactttggaaagtgc
actgtaactgtaagggtgtaaaatttgagaaaataccaaattttgaggta
aaatttgagaaatttcaaaaaatttcgaaaaattgcactataatagtcag
aaaatctgccgtatactatcttcgctttctgatttgaattaTGGCGCTGC
GATTTCCCCCCATCAGAGAATtagtaaaggcaaaaagtagttgagctcca
gctcctggactagcactataagggtcgatttccagccaaatttttcctac
ACTGAAAGAGtggtccgattttagagacctgatttttggccgaacgtacg
ggttgttttcaaaatcgagtgcccaGCCCCCCGGGAGTCTTATCCCCTTT
TTATAGTGCTGTGCGAATTATTCTTGGAATTTTACAAATCGAACGTTTTt
cgaattcgaatgttttgaatttgttttt Run BLAST on NCBI transcript from alignment at sc0005489:3247..4374 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044384 ID=TCONS_00044384|Name=TCONS_00044384|organism=Clytia hemisphaerica|type=transcript|length=1128bp|location=Sequence derived from alignment at sc0005489:3247..4374 (Clytia hemisphaerica)
aaaaacaaattcaaaacattcgaattcgaAAAACGTTCGATTTGTAAAAT
TCCAAGAATAATTCGCACAGCACTATAAAAAGGGGATAAGACTCCCGGGG
GGCtgggcactcgattttgaaaacaacccgtacgttcggccaaaaatcag
gtctctaaaatcggaccaCTCTTTCAGTgtaggaaaaatttggctggaaa
tcgacccttatagtgctagtccaggagctggagctcaactactttttgcc
tttactaATTCTCTGATGGGGGGAAATCGCAGCGCCAtaattcaaatcag
aaagcgaagatagtatacggcagattttctgactattatagtgcaatttt
tcgaaattttttgaaatttctcaaattttacctcaaaatttggtattttc
tcaaattttacacccttacagttacagtgcactttccaaagtccaaaaaa
caaaCCCTTAAGGGCCGCGCGTTCCGTAGatcacttacctggagtgcccc
cccTGGGATAAGACTCCAGTGGGGATGCTTCAAATCGTATGGAAGTGAAA
CTAGCAGTAGATATCACGCAGGTCTCAGTACAGCCTACCCTGTCAGTGAC
CCGGCAAAGTTTTGAAATCCACCGGGGGTTgccttcgaaaaaaaaaactc
aacctCACAGGGTGAGAATTTAACTCAATTTCCACCGGTGTAAGGTTAGC
GAGTCTGGTTTTCTTGGAGTTCATTGaaatcttgttttttttgaCCGGGT
ATGACCTTATTGATACGATTATTGAGCAGGGTAAGACCTTACATTCGATT
AAATTTCCCTGTTTTGATTGGGATAGtaaatttcaattcattttcTACCG
GGGCTTAAAATAAGGCAAATTTTTGCAGTCATTTTCACCGGATGATTATC
CACCGGGGCGGATCTGATCGGATCACTGAACATGGGAAGGGTCATCTCAA
ACTAATCGGGTAAAATTTTTCAGACAAAACGGTTGAATCGATACGAATTC
GATTCTTGGAACATGACAAAGGCTGTACTGCGGCGTACCATCTCTACAAC
AATACGCAAACGACGGTTTACTCTGGAAGTCGATCACGTAGCACGCCGAG
AAGAGCTTATCTCATCAGTGTTTGTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044384-exon-sc0005489-1491911889:3247..4374 | TCONS_00044384-exon-sc0005489-1491911889:3247..4374 | Clytia hemisphaerica | exon |
| TCONS_00044384-exon-sc0005489-1510915933:3247..4374 | TCONS_00044384-exon-sc0005489-1510915933:3247..4374 | Clytia hemisphaerica | exon |
| TCONS_00044384-exon-sc0005489-1575043694:3247..4374 | TCONS_00044384-exon-sc0005489-1575043694:3247..4374 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005489 | supercontig | sc0005489:3247..4374 . |
Blast
The following BLAST results are available for this feature:
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