TCONS_00044383 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044383
Unique NameTCONS_00044383
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length381

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044383 ID=TCONS_00044383|Name=TCONS_00044383|organism=Clytia hemisphaerica|type=transcript|length=381bp
ACTTTACATTGCCTCCAAACTGCAGACCTTTCTTGGTCTGCACTTTGTCT
AAGCTAAAatgtaaattaaatgtttttgccttttgaatttttaccatttt
attaccagaaagctctatatttggaggcgataccagtttccctccagtga
ttaccctttttcacgctaatcaaacagtctgattgacatcacctggatat
ttattacaaattatctaTTGACAGTCTCTTCTTCTCTATTCCTATTTCAG
CTTTATGGTTTTGCCTTCCAGTCTTCGTTCATTCTGTAACTAAGGGGAAG
TGAGACAGAGATTTGAGTCGAATAGagttgataaatatactaaaagtTCT
CTTCTTGCATTTAATTTATCTGTTGACTGAA
Run BLAST on NCBI

transcript from alignment at sc0005489:4..384

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044383 ID=TCONS_00044383|Name=TCONS_00044383|organism=Clytia hemisphaerica|type=transcript|length=381bp|location=Sequence derived from alignment at sc0005489:4..384 (Clytia hemisphaerica)
TTCAGTCAACAGATAAATTAAATGCAAGAAGAGAacttttagtatattta
tcaactCTATTCGACTCAAATCTCTGTCTCACTTCCCCTTAGTTACAGAA
TGAACGAAGACTGGAAGGCAAAACCATAAAGCTGAAATAGGAATAGAGAA
GAAGAGACTGTCAAtagataatttgtaataaatatccaggtgatgtcaat
cagactgtttgattagcgtgaaaaagggtaatcactggagggaaactggt
atcgcctccaaatatagagctttctggtaataaaatggtaaaaattcaaa
aggcaaaaacatttaatttacatTTTAGCTTAGACAAAGTGCAGACCAAG
AAAGGTCTGCAGTTTGGAGGCAATGTAAAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028015XLOC_028015Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044383-exon-sc0005489-1491911889:4..384TCONS_00044383-exon-sc0005489-1491911889:4..384Clytia hemisphaericaexon
TCONS_00044383-exon-sc0005489-1510915933:4..384TCONS_00044383-exon-sc0005489-1510915933:4..384Clytia hemisphaericaexon
TCONS_00044383-exon-sc0005489-1575043694:4..384TCONS_00044383-exon-sc0005489-1575043694:4..384Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005489supercontigsc0005489:4..384 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.405665	0.302701	0.602778	0.263617	0.57971	0.338615	0.48356	0.326096	3.31064	1.41388	0.253773	0.904952	0.198185	0.181237	0.753666	0.222439	0.00948581	0	0.440878	1.04608	0.28521	0.351361	0.56883	1.81027	1.52139	2.26059	0.758366	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044383 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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