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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044344 ID=TCONS_00044344|Name=TCONS_00044344|organism=Clytia hemisphaerica|type=transcript|length=685bp
TTCAATGACGTCATTCCCATTTTCATAGGTTGCATCACATGATGAAGAGG
ACGAGCTTATCGATACACAAGTGGAGACCTTGCCACCATCTTTTACTTTG
ATAGATAAACGCACCGAAAGTTCAAGCTCAAGCCATTCTCAACAGGATTT
TGGTGAATGTACCAGAGACAATGGTTCTGTAATTAATGATACCAAGAGCT
TGTTAAAAAACAATACTTTAGCTATCAATGATGTATCTGATAAGGAAGTA
AACAAACCAGAGAGCGAATgtggtgaaaataattctcttGATGATACTCA
TGAAGCAATATCTATAGAACCATCTAGTGTTACTGAAGAACAAGTAGAAA
AAACATGTGAAGACGATTCCCCTGAACCTGTTGGGGAATCTTCAGTAGCC
TTAACTGTTGATCTAGATGTCTCCATGACTGAAGGAGATTCCCAATCAAA
GAAAGGAGCCTCTAAAAGGAAAAATCGCTTACCAAAAATTCATCCACCGA
AAATAGGCGATGAAACTGATAAAGCTCTAATGtcacagaagaaaaaaaag
aaatctggTGTTGTTGGACCTTCCCCGAGAAAGAAATTGATAGGACCCAA
AAGCAGGATCTCAGCTTCATCCACAGACGATTCAGTTATACCCTCCGATG
GAATCTCATCTACGACCAAAAAGCAAACTTCGTCT Run BLAST on NCBI transcript from alignment at sc0005415:3391..4491+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044344 ID=TCONS_00044344|Name=TCONS_00044344|organism=Clytia hemisphaerica|type=transcript|length=1101bp|location=Sequence derived from alignment at sc0005415:3391..4491+ (Clytia hemisphaerica)
TTCAATGACGTCATTCCCATTTTCATAGGTTGCATCACATGATGAAGAGG
ACGAGCTTATCGATACACAAGTGGAGACCTTGCCACCATCTTTTACTTTG
ATAGATAAACGCACCGAAAGTTCAAGCTCAAGCCATTCTCAACAGGATTT
TGGTGAATGTACCAGAGACAATGGTTCTGTAATTAATGATACCAAGAGCT
TGTTAAAAAACAATACTTTAGCTATCAATGATGTATCTGATAAGGAAGTA
AACAAACCAGAGAGCGAATgtggtgaaaataattctcttGATGATACTCA
TGAAGCAATATCTATAGAACCATCTAGTGTTACTGAAGAACAAGTAGAAA
AAACATGTGAAGACGATTCCCCTGAACCTGTTGGGGAATCTTCAGTAGCC
TTAACTGTTGATCTAGATGTCTCCATGACTGAAGGAGATTCCCAATCAAA
GAAAGGAGCCTCTAAAAGGAAAAATCGCTTACCAAAAATTCATCCACCGA
AAATAGGCGATGAAACTGATAAAGCTCTAATGtcacagaagaaaaaaaag
aaatctggTGTTGTTGGACCTTCCCCGAGAAAGAAATTGATAGGTTAGTG
GTTCATTTTTTCCTGCATTATGTTTTCTTGTAGAGTTTTGAAACAGTTGT
AGTAGTTATGCCTCGAGCTTAGTTTTCTGTAATAATATTGAATATTTTAC
TTCAAAACGACCCAATTATAGTAAAAGATGTCCCATTGGTTCATTATAGA
TTCTTATTCTCAACTATAGATTCTTTCAACTAGATTTCACCTTGCATGTA
TGCCTTTGAGTTGAACAGTTTGTCTCCATGAGTGTTcctgaaaatctaga
aaatgagagttttttcaatatttatggAAAAATTGCATTACTCAGTAGTT
ACTGTTCAGGGAAAAAAGACTTTTGGAAAGAAAGGCTTTTTATGATCCAA
ACCTAGGGGAAATATGTATTGAGTCCTGCCATAACCTTGCATGTGGTCTT
AAATTTTAGGACCCAAAAGCAGGATCTCAGCTTCATCCACAGACGATTCA
GTTATACCCTCCGATGGAATCTCATCTACGACCAAAAAGCAAACTTCGTC
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044344-exon-sc0005415-1491911889:3391..3983 | TCONS_00044344-exon-sc0005415-1491911889:3391..3983 | Clytia hemisphaerica | exon |
| TCONS_00044344-exon-sc0005415-1510915933:3391..3983 | TCONS_00044344-exon-sc0005415-1510915933:3391..3983 | Clytia hemisphaerica | exon |
| TCONS_00044344-exon-sc0005415-1575043694:3391..3983 | TCONS_00044344-exon-sc0005415-1575043694:3391..3983 | Clytia hemisphaerica | exon |
| TCONS_00044344-exon-sc0005415-1491911889:4400..4491 | TCONS_00044344-exon-sc0005415-1491911889:4400..4491 | Clytia hemisphaerica | exon |
| TCONS_00044344-exon-sc0005415-1510915933:4400..4491 | TCONS_00044344-exon-sc0005415-1510915933:4400..4491 | Clytia hemisphaerica | exon |
| TCONS_00044344-exon-sc0005415-1575043694:4400..4491 | TCONS_00044344-exon-sc0005415-1575043694:4400..4491 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005415 | supercontig | sc0005415:3391..4491 + |
Blast
The following BLAST results are available for this feature:
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