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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044335 ID=TCONS_00044335|Name=TCONS_00044335|organism=Clytia hemisphaerica|type=transcript|length=1308bp
ATCCGGTTGGTTGGTGGTTGGTAGAGTAaactttttcaggtttttagGAT
CTAGTAAATCAAGTTggcaatcaacaaaaacttGAAGCGAATGATAATTC
AAAGAAGTGCTTAgctatcaaaaaaattttccgacatTTTTCTGACTCGT
CCAACTTGGGATTGATGTTTTGAAGGACTTTGAAggtgagtcggtcgggc
gaaCAGACACAACATTATTGATGGTTNGGGATTGATGTTTTGAAGGACTT
TGAAggtgagtcggtcgggcgaaCAGACAGAACATTATTGATGGTCGCCT
TACAAGATTTCCCTGATTGTTATCCGCACATAAATAAAGTAATAGAAGGT
TGAAATCAAAATTCCTAGCAAATATTATGAAAAAGTTAATgagataaaaa
atatattattctTGAATATCTGCTTCTGAGATGGCACGACATCTGGTGAA
GTACCCAGATGAATTAAAAACTGCGCAACAGAAGCTAACTTCCATTTCGC
CAtgtccatttttgtttttattgggcTTGAAAGCAACCATTACAGGGCGG
TGTGACTTGAAGAGTGATTCTTTCACAGGTTTCACGTGTCCGTTTAAATA
TACCATTTTTCGATAACGAAAACTTTGCTTATTTGCATTGCTTTCAAAAG
GTCTATCAACAGTTACTGAATTACGTGACCCCTCAGCTCGAAAAAAACAA
TCGTCATCATGAACAGTCACAATTCGATAGTTTTTTCCTCGCACAATAAT
GAAGTCATTTACATTAAGCCCATGATCTGCTTTGAGTGAAACATAGTTAT
CGTCTTTTCTAACTGTAATGGTAAAACCGTCCTTTCGTTCTTCGGGAAAT
ATATCAGCATCATCTGGTTTTAACAGTGGAACGAGGTCTGAAAGCTTAAC
CTTGGGCACATCATCTCTATCGACTTCTATACTGGCTGgtataaaaacat
tgaaagagTTCTCTTCGGGGTCAGCAATCTCATTTGTAATCTTCTGAATT
GGGAAAACCAAATCCCCACGATTCAACGTTGAGTTGTTTGCTGCTACACA
ACAAGTTATGTAATAATGCGGCATTATGATCGAGAAATCACGATGGTGGT
TGGATTTCACTGTTGCTTTAGCTCCAAATATATTTACAATCATTGCTAAT
GTTTTAAGTTCACCAGACTTGAAAGTGTTCTTGAATATTGACTGGTGGAT
GggatgggtggaaatttttttcacaacaTCATCAGGTGAATTTCTGAACA
CGTTGTTTTCTCTTATCCTCTTTATTGTGTTTTGAGAAAACTCTTGACAA
CATTGCTT Run BLAST on NCBI protein sequence of TCONS_00044335-protein >TCONS_00044335-protein ID=TCONS_00044335-protein|Name=TCONS_00044335-protein|organism=Clytia hemisphaerica|type=polypeptide|length=300bp
KQCCQEFSQNTIKRIRENNVFRNSPDDVVKKISTHPIHQSIFKNTFKSGE
LKTLAMIVNIFGAKATVKSNHHRDFSIIMPHYYITCCVAANNSTLNRGDL
VFPIQKITNEIADPEENSFNVFIPASIEVDRDDVPKVKLSDLVPLLKPDD
ADIFPEERKDGFTITVRKDDNYVSLKADHGLNVNDFIIVRGKNYRIVTVH
DDDCFFRAEGSRNSVTVDRPFESNANKQSFRYRKMVYLNGHVKPVKESLF
KSHRPVMVAFKPNKNKNGHGEMEVSFCCAVFNSSGYFTRCRAISEADIQE Run BLAST on NCBI transcript from alignment at sc0005395:3169..4476 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044335 ID=TCONS_00044335|Name=TCONS_00044335|organism=Clytia hemisphaerica|type=transcript|length=1308bp|location=Sequence derived from alignment at sc0005395:3169..4476 (Clytia hemisphaerica)
AAGCAATGTTGTCAAGAGTTTTCTCAAAACACAATAAAGAGGATAAGAGA
AAACAACGTGTTCAGAAATTCACCTGATGAtgttgtgaaaaaaatttcca
cccatccCATCCACCAGTCAATATTCAAGAACACTTTCAAGTCTGGTGAA
CTTAAAACATTAGCAATGATTGTAAATATATTTGGAGCTAAAGCAACAGT
GAAATCCAACCACCATCGTGATTTCTCGATCATAATGCCGCATTATTACA
TAACTTGTTGTGTAGCAGCAAACAACTCAACGTTGAATCGTGGGGATTTG
GTTTTCCCAATTCAGAAGATTACAAATGAGATTGCTGACCCCGAAGAGAA
ctctttcaatgtttttatacCAGCCAGTATAGAAGTCGATAGAGATGATG
TGCCCAAGGTTAAGCTTTCAGACCTCGTTCCACTGTTAAAACCAGATGAT
GCTGATATATTTCCCGAAGAACGAAAGGACGGTTTTACCATTACAGTTAG
AAAAGACGATAACTATGTTTCACTCAAAGCAGATCATGGGCTTAATGTAA
ATGACTTCATTATTGTGCGAGGAAAAAACTATCGAATTGTGACTGTTCAT
GATGACGATTGTTTTTTTCGAGCTGAGGGGTCACGTAATTCAGTAACTGT
TGATAGACCTTTTGAAAGCAATGCAAATAAGCAAAGTTTTCGTTATCGAA
AAATGGTATATTTAAACGGACACGTGAAACCTGTGAAAGAATCACTCTTC
AAGTCACACCGCCCTGTAATGGTTGCTTTCAAgcccaataaaaacaaaaa
tggacaTGGCGAAATGGAAGTTAGCTTCTGTTGCGCAGTTTTTAATTCAT
CTGGGTACTTCACCAGATGTCGTGCCATCTCAGAAGCAGATATTCAagaa
taatatattttttatctcATTAACTTTTTCATAATATTTGCTAGGAATTT
TGATTTCAACCTTCTATTACTTTATTTATGTGCGGATAACAATCAGGGAA
ATCTTGTAAGGCGACCATCAATAATGTTCTGTCTGttcgcccgaccgact
caccTTCAAAGTCCTTCAAAACATCAATCCCNAACCATCAATAATGTTGT
GTCTGttcgcccgaccgactcaccTTCAAAGTCCTTCAAAACATCAATCC
CAAGTTGGACGAGTCAGAAAAatgtcggaaaatttttttgatagcTAAGC
ACTTCTTTGAATTATCATTCGCTTCaagtttttgttgattgccAACTTGA
TTTACTAGATCctaaaaacctgaaaaagttTACTCTACCAACCACCAACC
AACCGGAT Coding sequence (CDS) from alignment at sc0005395:3169..4476 >TCONS_00044335 ID=TCONS_00044335|Name=TCONS_00044335|organism=Clytia hemisphaerica|type=CDS|length=903bp|location=Sequence derived from alignment at sc0005395:3169..4476 (Clytia hemisphaerica)
AAGCAATGTTGTCAAGAGTTTTCTCAAAACACAATAAAGAGGATAAGAGA
AAACAACGTGTTCAGAAATTCACCTGATGAtgttgtgaaaaaaatttcca
cccatccCATCCACCAGTCAATATTCAAGAACACTTTCAAGTCTGGTGAA
CTTAAAACATTAGCAATGATTGTAAATATATTTGGAGCTAAAGCAACAGT
GAAATCCAACCACCATCGTGATTTCTCGATCATAATGCCGCATTATTACA
TAACTTGTTGTGTAGCAGCAAACAACTCAACGTTGAATCGTGGGGATTTG
GTTTTCCCAATTCAGAAGATTACAAATGAGATTGCTGACCCCGAAGAGAA
ctctttcaatgtttttatacCAGCCAGTATAGAAGTCGATAGAGATGATG
TGCCCAAGGTTAAGCTTTCAGACCTCGTTCCACTGTTAAAACCAGATGAT
GCTGATATATTTCCCGAAGAACGAAAGGACGGTTTTACCATTACAGTTAG
AAAAGACGATAACTATGTTTCACTCAAAGCAGATCATGGGCTTAATGTAA
ATGACTTCATTATTGTGCGAGGAAAAAACTATCGAATTGTGACTGTTCAT
GATGACGATTGTTTTTTTCGAGCTGAGGGGTCACGTAATTCAGTAACTGT
TGATAGACCTTTTGAAAGCAATGCAAATAAGCAAAGTTTTCGTTATCGAA
AAATGGTATATTTAAACGGACACGTGAAACCTGTGAAAGAATCACTCTTC
AAGTCACACCGCCCTGTAATGGTTGCTTTCAAgcccaataaaaacaaaaa
tggacaTGGCGAAATGGAAGTTAGCTTCTGTTGCGCAGTTTTTAATTCAT
CTGGGTACTTCACCAGATGTCGTGCCATCTCAGAAGCAGATATTCAagaa
taa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044335-exon-sc0005395-1491911889:3169..4476 | TCONS_00044335-exon-sc0005395-1491911889:3169..4476 | Clytia hemisphaerica | exon |
| TCONS_00044335-exon-sc0005395-1510915933:3169..4476 | TCONS_00044335-exon-sc0005395-1510915933:3169..4476 | Clytia hemisphaerica | exon |
| TCONS_00044335-exon-sc0005395-1575043694:3169..4476 | TCONS_00044335-exon-sc0005395-1575043694:3169..4476 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005395 | supercontig | sc0005395:3169..4476 . |
Blast
The following BLAST results are available for this feature:
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