|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044334 ID=TCONS_00044334|Name=TCONS_00044334|organism=Clytia hemisphaerica|type=transcript|length=714bp
TAAATGTTTTTCATGAacttttgcacactgatgcaaaatagcgatatcta
aaatgtgactgagctcgattttcgaaaacatatTGTTGTGGCCGAAAATG
cgggaaatatgccggaaaaaccggtgtTCTGACATTTTTCTGGAGATTTC
ATCaatagctttttctaatttttttttgcacaaaaaagaTGCTTATTAGG
AATGGCAACAACATTGTCCAGtccgattcttgagaaaaacttttttccgc
gGGAACTCGCCgcttttgcttatttttatcaGACTTTTTCCcaatatttc
gttgttttttcacacaaaaacattattgataacaatgcccaccatcaacc
ATGGTTCAATtgttctccttattgctatctaactttcatcatcaggtatt
cagcatgtagcttgttaaCACTAAAATAGCTGGCACTTCCTTTTTTTAGA
TATCCTTTTAATTCTTAGCCTGTGTCATATTTTTCCTTGCATTGCTGACC
ATTCTTTGAATCCAAAACTGCTTGTCTTtggttctttttcttttgtttta
ttttcaggagAATTCACGCAGAACAAGTCTTGGTGGAGTATGTTACTCGA
CGCGATGTCTCTCTTGGTCAAATTTTACTGAATACAAAACAACCATGTAA
AAACATAAATTAACAACAAACCATGTCTGCTGATCTCGATCAAGAAATTG
CGGCCCTTAAAGGC Run BLAST on NCBI transcript from alignment at sc0005394:3244..4521- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044334 ID=TCONS_00044334|Name=TCONS_00044334|organism=Clytia hemisphaerica|type=transcript|length=1278bp|location=Sequence derived from alignment at sc0005394:3244..4521- (Clytia hemisphaerica)
TAAATGTTTTTCATGAACTTTTGCACACTGATGCAAAATAGCGATATCTA
AAATGTGACTGAGCTCGATTTTCGAAAACATATTGTTGTGGCCGAAAATG
CGGGAAATATGCCGGAAAAACCGGTGTTCTGACATTTTTCTGGAGATTTC
ATCAATAGCTTTTTCTAATTTTTTTTTGCACAAAAAAGATGCTTATTAGG
AATGGCAACAACATTGTCCAGTCCGATTCTTGAGAAAAACTTTTTTCCGC
GGGAACTCGCCGCTTTTGCTTATTTTTATCAGACTTTTTCCCAATATTTC
GTTGTTTTTTCACACAAAAACATTATTGATAACAATGCCCACCATCAACC
ATGGTTCAATTGTTCTCCTTATTGCTATCTAACTTTCATCATCAGGTATT
CAGCATGTAGCTTGTTAACACTAAAATAGCTGGCACTTCCTTTTTTTAGA
TATCCTTTTAATTCTTAGCCTGTGTCATATTTTTCCTTGCATTGCTGACC
ATTCTTTGAATCCAAAACTGCTTGTCTTTGGTTCTTTTTCTTTTGTTTTA
TTTTCAGGAGAATTCACGCAGAACAAGTCTTGGTGGAGTATGTTACTCGA
CGCGATGTCTCTCTTGGTCAAATTTTACTGAATACAAAACAACCATGTAA
GTAGATTGTAATAGAACCATTCCTATGGATTTTTTTTTTAGTTTGGAAAT
TTCTAATGAACATTAGTAAGTAACACCAAACATTTGTTCAAAGTTCTTTG
GAATTAAATTTACTTTCTTCCAACTTTCTTTTAGAGAAAGCGTAGAAGCA
CGAGGAGATCAATATGAAAGAAAGTGTCCCAGAAAACATAGTCCAATTAA
CTAAGAAAATGCTGTTTTCACCAGAAAATCTTTTTGATTCTTTTTCTCTT
TCAAACCAAAAGCCTTCTAAACTTCAGCGGCAATTCAAAAGAAAAAAAGA
AAAACAGCATTTGATTGAAAGTCCTTTATCAGTTATTTTTCTGGGACACT
GTACAGAAAGAAGATATCCAGTTTGCCCAGTTTCGAGAGTCAACGAATCT
ATGTAGTGCATTAATTAGTTTTCCTGAGAGTTGAATGACTTTGAAATAGT
TTCATTTGTACGAAATATATACCCGAGTCATTTTTTAATTGGTCTTTGTT
CTGACTGATTCTGTTGATCCTATTCGGCAACATTTTAATATTTTTTTTAA
CTTTTAACAGGTAAAAACATAAATTAACAACAAACCATGTCTGCTGATCT
CGATCAAGAAATTGCGGCCCTTAAAGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044334-exon-sc0005394-1575043694:3876..4521 | TCONS_00044334-exon-sc0005394-1575043694:3876..4521 | Clytia hemisphaerica | exon |
| TCONS_00044334-exon-sc0005394-1575043694:3244..3311 | TCONS_00044334-exon-sc0005394-1575043694:3244..3311 | Clytia hemisphaerica | exon |
| TCONS_00044334-exon-sc0005394-1510915933:3876..4521 | TCONS_00044334-exon-sc0005394-1510915933:3876..4521 | Clytia hemisphaerica | exon |
| TCONS_00044334-exon-sc0005394-1510915933:3244..3311 | TCONS_00044334-exon-sc0005394-1510915933:3244..3311 | Clytia hemisphaerica | exon |
| TCONS_00044334-exon-sc0005394-1491911889:3876..4521 | TCONS_00044334-exon-sc0005394-1491911889:3876..4521 | Clytia hemisphaerica | exon |
| TCONS_00044334-exon-sc0005394-1491911889:3244..3311 | TCONS_00044334-exon-sc0005394-1491911889:3244..3311 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005394 | supercontig | sc0005394:3244..4521 - |
Blast
The following BLAST results are available for this feature:
|
