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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044268 ID=TCONS_00044268|Name=TCONS_00044268|organism=Clytia hemisphaerica|type=transcript|length=1210bp
TGAGAGCaatttaataaaaacatttaataagaactttttgaaagagtatg
taatgtatttaatttttatgtttcagatgaaaaaaattgttaaccTTATT
CTTTTTCAAGTAATTTGCTATATACTGTGCCATGGTTTTGAACTAAATAA
TGAAGAGTTTTACTACAAAGGATGTGAATCAGTTGTTGATAATTCACATG
ATATACCAGGTTCTGATGTCAAGTATTTCAGTTTTGTATTTAACTCAACA
ATTAAAGATACAGAATACAAAATACTGCTCTGTAGAGAAGATATATCTGC
TCAATGTCAACAGGAAGTAAATATCTCTCAAGTATCTCAAATTATTGAAT
GTGAGAatgagaagaaaaataaacgaaTAGTTTGCCCTGTAGTCAAAGGT
TTTATACATGGACCTATTTATAGGGGTGAATcattgaaactgaaaatatt
cataTATAGCATTAATGAGTCACAAACAAACTTGATGATTGTAAAGTCTT
TTCAGTATGCAGAATGTAATGTACGTGGATGTAAAGACTATAAACCAGCC
CTCGAAATTGACACTAACAGATTTCAATATCCATTCCAGGAAAATCAGTT
GAAGTTTGGATTATCAAATCTTCCTTCAGAACCTTATAAACAATATAATC
AGTATTATTTCACTGTTACTTTGTCAAATGTGAACTCTGATCAATCAATT
CTATTCAGGAATATCACAAAAATGAGATCCATAAATTTAAAAGAGCAGTT
TACTTATGATGCAAAAAGCTGTTTAtctcattttgataaaatttgcaTCA
CTTCAAATTGGGATTATTGTAGTGGACCTCACAAAAGTATCTGGACATCG
AATACAACATGTAAACCATTTTCGTATGAAAACTTCTTCCCAAAAGTAAA
ATTTAGCCTGgaaaaaccaaatcaaatagAATTTCTAGTTGATGAATACA
ATGACTCAATCTTTCACTTTGTGGTTAAAAAATTCAACAGCAATGGCAAG
GTGTTAATGTCTTCAAAAAATACAACCAAAATGATCCTGAAAAGAAATGT
CACAGATGATATGTATTATGAAGTTGGATTATGTGATAAATGCGCATGTG
GTAAATTTGCTACTGTACCACGAAAAGAAGCAATAATCCCAGAAACGAAT
CAAAATACACGTAGGACAGATATTGGAATGATTCTTGGTATTATTTTGGG
AATATCTGGT Run BLAST on NCBI protein sequence of TCONS_00044268-protein >TCONS_00044268-protein ID=TCONS_00044268-protein|Name=TCONS_00044268-protein|organism=Clytia hemisphaerica|type=polypeptide|length=403bp
ESNLIKTFNKNFLKEYVMYLIFMFQMKKIVNLILFQVICYILCHGFELNN
EEFYYKGCESVVDNSHDIPGSDVKYFSFVFNSTIKDTEYKILLCREDISA
QCQQEVNISQVSQIIECENEKKNKRIVCPVVKGFIHGPIYRGESLKLKIF
IYSINESQTNLMIVKSFQYAECNVRGCKDYKPALEIDTNRFQYPFQENQL
KFGLSNLPSEPYKQYNQYYFTVTLSNVNSDQSILFRNITKMRSINLKEQF
TYDAKSCLSHFDKICITSNWDYCSGPHKSIWTSNTTCKPFSYENFFPKVK
FSLEKPNQIEFLVDEYNDSIFHFVVKKFNSNGKVLMSSKNTTKMILKRNV
TDDMYYEVGLCDKCACGKFATVPRKEAIIPETNQNTRRTDIGMILGIILG
ISG Run BLAST on NCBI transcript from alignment at sc0005272:4..1213 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044268 ID=TCONS_00044268|Name=TCONS_00044268|organism=Clytia hemisphaerica|type=transcript|length=1210bp|location=Sequence derived from alignment at sc0005272:4..1213 (Clytia hemisphaerica)
ACCAGATATTCCCAAAATAATACCAAGAATCATTCCAATATCTGTCCTAC
GTGTATTTTGATTCGTTTCTGGGATTATTGCTTCTTTTCGTGGTACAGTA
GCAAATTTACCACATGCGCATTTATCACATAATCCAACTTCATAATACAT
ATCATCTGTGACATTTCTTTTCAGGATCATTTTGGTTGTATTTTTTGAAG
ACATTAACACCTTGCCATTGCTGTTGAATTTTTTAACCACAAAGTGAAAG
ATTGAGTCATTGTATTCATCAACTAGAAATTctatttgatttggtttttc
CAGGCTAAATTTTACTTTTGGGAAGAAGTTTTCATACGAAAATGGTTTAC
ATGTTGTATTCGATGTCCAGATACTTTTGTGAGGTCCACTACAATAATCC
CAATTTGAAGTGAtgcaaattttatcaaaatgagaTAAACAGCTTTTTGC
ATCATAAGTAAACTGCTCTTTTAAATTTATGGATCTCATTTTTGTGATAT
TCCTGAATAGAATTGATTGATCAGAGTTCACATTTGACAAAGTAACAGTG
AAATAATACTGATTATATTGTTTATAAGGTTCTGAAGGAAGATTTGATAA
TCCAAACTTCAACTGATTTTCCTGGAATGGATATTGAAATCTGTTAGTGT
CAATTTCGAGGGCTGGTTTATAGTCTTTACATCCACGTACATTACATTCT
GCATACTGAAAAGACTTTACAATCATCAAGTTTGTTTGTGACTCATTAAT
GCTATAtatgaatattttcagtttcaatgATTCACCCCTATAAATAGGTC
CATGTATAAAACCTTTGACTACAGGGCAAACTAttcgtttatttttcttc
tcatTCTCACATTCAATAATTTGAGATACTTGAGAGATATTTACTTCCTG
TTGACATTGAGCAGATATATCTTCTCTACAGAGCAGTATTTTGTATTCTG
TATCTTTAATTGTTGAGTTAAATACAAAACTGAAATACTTGACATCAGAA
CCTGGTATATCATGTGAATTATCAACAACTGATTCACATCCTTTGTAGTA
AAACTCTTCATTATTTAGTTCAAAACCATGGCACAGTATATAGCAAATTA
CTTGAAAAAGAATAAggttaacaatttttttcatctgaaacataaaaatt
aaatacattacatactctttcaaaaagttcttattaaatgtttttattaa
attGCTCTCA Coding sequence (CDS) from alignment at sc0005272:4..1213 >TCONS_00044268 ID=TCONS_00044268|Name=TCONS_00044268|organism=Clytia hemisphaerica|type=CDS|length=1209bp|location=Sequence derived from alignment at sc0005272:4..1213 (Clytia hemisphaerica)
ACCAGATATTCCCAAAATAATACCAAGAATCATTCCAATATCTGTCCTAC
GTGTATTTTGATTCGTTTCTGGGATTATTGCTTCTTTTCGTGGTACAGTA
GCAAATTTACCACATGCGCATTTATCACATAATCCAACTTCATAATACAT
ATCATCTGTGACATTTCTTTTCAGGATCATTTTGGTTGTATTTTTTGAAG
ACATTAACACCTTGCCATTGCTGTTGAATTTTTTAACCACAAAGTGAAAG
ATTGAGTCATTGTATTCATCAACTAGAAATTctatttgatttggtttttc
CAGGCTAAATTTTACTTTTGGGAAGAAGTTTTCATACGAAAATGGTTTAC
ATGTTGTATTCGATGTCCAGATACTTTTGTGAGGTCCACTACAATAATCC
CAATTTGAAGTGAtgcaaattttatcaaaatgagaTAAACAGCTTTTTGC
ATCATAAGTAAACTGCTCTTTTAAATTTATGGATCTCATTTTTGTGATAT
TCCTGAATAGAATTGATTGATCAGAGTTCACATTTGACAAAGTAACAGTG
AAATAATACTGATTATATTGTTTATAAGGTTCTGAAGGAAGATTTGATAA
TCCAAACTTCAACTGATTTTCCTGGAATGGATATTGAAATCTGTTAGTGT
CAATTTCGAGGGCTGGTTTATAGTCTTTACATCCACGTACATTACATTCT
GCATACTGAAAAGACTTTACAATCATCAAGTTTGTTTGTGACTCATTAAT
GCTATAtatgaatattttcagtttcaatgATTCACCCCTATAAATAGGTC
CATGTATAAAACCTTTGACTACAGGGCAAACTAttcgtttatttttcttc
tcatTCTCACATTCAATAATTTGAGATACTTGAGAGATATTTACTTCCTG
TTGACATTGAGCAGATATATCTTCTCTACAGAGCAGTATTTTGTATTCTG
TATCTTTAATTGTTGAGTTAAATACAAAACTGAAATACTTGACATCAGAA
CCTGGTATATCATGTGAATTATCAACAACTGATTCACATCCTTTGTAGTA
AAACTCTTCATTATTTAGTTCAAAACCATGGCACAGTATATAGCAAATTA
CTTGAAAAAGAATAAggttaacaatttttttcatctgaaacataaaaatt
aaatacattacatactctttcaaaaagttcttattaaatgtttttattaa
attGCTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044268-exon-sc0005272-1491911889:4..1213 | TCONS_00044268-exon-sc0005272-1491911889:4..1213 | Clytia hemisphaerica | exon |
| TCONS_00044268-exon-sc0005272-1510915933:4..1213 | TCONS_00044268-exon-sc0005272-1510915933:4..1213 | Clytia hemisphaerica | exon |
| TCONS_00044268-exon-sc0005272-1575043694:4..1213 | TCONS_00044268-exon-sc0005272-1575043694:4..1213 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005272 | supercontig | sc0005272:4..1213 . |
Blast
The following BLAST results are available for this feature:
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