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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044216 ID=TCONS_00044216|Name=TCONS_00044216|organism=Clytia hemisphaerica|type=transcript|length=1372bp
tgcGGTGCTCTAATTTATTTAGTGCCTTTTCCCGTGTTCGATTCTCAACT
TTGTACTTTTCTAAgactttttgacgtttcgagattttgtgttttccctt
gttAAGTTTTCCACTGAAGCCGCATCTTCATCACTGATGCTTTAGGGTCA
TAAATTGCTTTCTGTTTATGTCCATGGTACTGTAAAACTTGAagatgata
ttttgtaattttcttttttcactgGGCGTCACTGTATGGAAATAATTAAT
TAATCTAAATATTACAGCACCCGTGTTTTGCTTTGGAAATCCTttcaaaa
aagttgtttttctcCTCTTTGATAGGCCTCAATTTTGAGTCGATTCTAGC
TCTCCTGTCAggctttttgattttcttaccAGACTCCTCCATTTTCGAAA
ACTTCTTTTTGGgatcttcaaaataaatatctgCTTCTCAAGCTGATGAC
AGGGAATGGAGGTACatgcttttttatttctgatgTTCTATTCCCCTCCA
TTACTCATTGTCGTTTGTTGTATACGGTATTCCGAGGTCACAACTCCTTC
GGTTCGTGGAATAAATTGAAACTTGCCGGTAGATACTCCCAGACGCAGTG
GAAATAATCACCAAATAGCCGCCAGATACTGGACAGGCGCATCAATGGGT
TGTGAATTTTTCGAGCATTTTTCCTCTAGCCAGGTTATCTGCAAAGATTA
ACGAGTCCTGTCTTCCCGATTGACTGCATTCGTGACTCGATATCCGGTAC
AACGGGTTAAGCCAGTCATGCAAGTGAAACAGTTGATTATTTATACAGGG
CGCCGAACACTCGCCCTGTCGTGAGAGCCCTCGATTTGCGTTATCCAGTG
AGCACCTACGAGGAGGGAGAGGGTTGACTTCTGAGTTGAGAGGCTTTTTG
AGACGCCGGACCTCTACCTACACCTCTATTCACTCAGCTCGATAGTTAAA
TGTATGGAAAAGGAAAAAGTAGGAAAAAAGTATTTGCGtggaaaaatgat
aaattatcGATCACATGACACATAACcgagaccaaaacaaatcaagACAC
TAAAAAACGAGTAGAAAAAAAAACGATATTCCGCATCCAAACTCGTTGTC
GTACGTTTAATTTCGGTTCAATGAGAATTGTAGAAGCTTTCCCTTCTTGG
AAAATATAGCTGTGACATAAGGATCCTCGCCTTTTTTTTATCGTGGATTA
TTTCTTTAAGTTTTCTTGTCACTGAAGGACCAACTTCATTATCGTCAGCC
TCCTTCAATGCTGTTGCATTCTTTCGTTTGAGTTCTTTATTCTCTTTGAC
TATATTATCGTATTCGAACCTCAAATTTTCGATCTGGTCATTCAACGAGT
TGATCGTCTCTTTTTTCTTCAC Run BLAST on NCBI transcript from alignment at sc0005179:1672..3043 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044216 ID=TCONS_00044216|Name=TCONS_00044216|organism=Clytia hemisphaerica|type=transcript|length=1372bp|location=Sequence derived from alignment at sc0005179:1672..3043 (Clytia hemisphaerica)
GTGAAGAAAAAAGAGACGATCAACTCGTTGAATGACCAGATCGAAAATTT
GAGGTTCGAATACGATAATATAGTCAAAGAGAATAAAGAACTCAAACGAA
AGAATGCAACAGCATTGAAGGAGGCTGACGATAATGAAGTTGGTCCTTCA
GTGACAAGAAAACTTAAAGAAATAATCCACGATAAAAAAAAGGCGAGGAT
CCTTATGTCACAGCTATATTTTCCAAGAAGGGAAAGCTTCTACAATTCTC
ATTGAACCGAAATTAAACGTACGACAACGAGTTTGGATGCGGAATATCGT
TTTTTTTTCTACTCGTTTTTTAGTGTcttgatttgttttggtctcgGTTA
TGTGTCATGTGATCgataatttatcatttttccaCGCAAATACTTTTTTC
CTACTTTTTCCTTTTCCATACATTTAACTATCGAGCTGAGTGAATAGAGG
TGTAGGTAGAGGTCCGGCGTCTCAAAAAGCCTCTCAACTCAGAAGTCAAC
CCTCTCCCTCCTCGTAGGTGCTCACTGGATAACGCAAATCGAGGGCTCTC
ACGACAGGGCGAGTGTTCGGCGCCCTGTATAAATAATCAACTGTTTCACT
TGCATGACTGGCTTAACCCGTTGTACCGGATATCGAGTCACGAATGCAGT
CAATCGGGAAGACAGGACTCGTTAATCTTTGCAGATAACCTGGCTAGAGG
AAAAATGCTCGAAAAATTCACAACCCATTGATGCGCCTGTCCAGTATCTG
GCGGCTATTTGGTGATTATTTCCACTGCGTCTGGGAGTATCTACCGGCAA
GTTTCAATTTATTCCACGAACCGAAGGAGTTGTGACCTCGGAATACCGTA
TACAACAAACGACAATGAGTAATGGAGGGGAATAGAAcatcagaaataaa
aaagcatGTACCTCCATTCCCTGTCATCAGCTTGAGAAGcagatatttat
tttgaagatcCCAAAAAGAAGTTTTCGAAAATGGAGGAGTCTggtaagaa
aatcaaaaagccTGACAGGAGAGCTAGAATCGACTCAAAATTGAGGCCTA
TCAAAGAGgagaaaaacaacttttttgaaAGGATTTCCAAAGCAAAACAC
GGGTGCTGTAATATTTAGATTAATTAATTATTTCCATACAGTGACGCCca
gtgaaaaaagaaaattacaaaatatcatctTCAAGTTTTACAGTACCATG
GACATAAACAGAAAGCAATTTATGACCCTAAAGCATCAGTGATGAAGATG
CGGCTTCAGTGGAAAACTTaacaagggaaaacacaaaatctcgaaacgtc
aaaaagtcTTAGAAAAGTACAAAGTTGAGAATCGAACACGGGAAAAGGCA
CTAAATAAATTAGAGCACCgca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044216-exon-sc0005179-1491911889:1672..3043 | TCONS_00044216-exon-sc0005179-1491911889:1672..3043 | Clytia hemisphaerica | exon |
| TCONS_00044216-exon-sc0005179-1510915933:1672..3043 | TCONS_00044216-exon-sc0005179-1510915933:1672..3043 | Clytia hemisphaerica | exon |
| TCONS_00044216-exon-sc0005179-1575043694:1672..3043 | TCONS_00044216-exon-sc0005179-1575043694:1672..3043 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005179 | supercontig | sc0005179:1672..3043 . |
Blast
The following BLAST results are available for this feature:
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