TCONS_00044195 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044195
Unique NameTCONS_00044195
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length156

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044195 ID=TCONS_00044195|Name=TCONS_00044195|organism=Clytia hemisphaerica|type=transcript|length=156bp
AATTTTACAGAGTAAAAAAAGTTGAGAGTTTTGCTGCCCGCGTACGAAAG
ATGAAAACGCGTTTTAACCGCGGGATCTGGGGCTCATTTTAGAATTAAAG
AGACACGTGAAGTTCTTTTCAAGATCAAATTCATCGCAGAAAGACCTGTC
TAAANN
Run BLAST on NCBI

transcript from alignment at sc0005140:3270..3425

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044195 ID=TCONS_00044195|Name=TCONS_00044195|organism=Clytia hemisphaerica|type=transcript|length=156bp|location=Sequence derived from alignment at sc0005140:3270..3425 (Clytia hemisphaerica)
NNTTTAGACAGGTCTTTCTGCGATGAATTTGATCTTGAAAAGAACTTCAC
GTGTCTCTTTAATTCTAAAATGAGCCCCAGATCCCGCGGTTAAAACGCGT
TTTCATCTTTCGTACGCGGGCAGCAAAACTCTCAACTTTTTTTACTCTGT
AAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027841XLOC_027841Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044195-exon-sc0005140-1491911889:3270..3425TCONS_00044195-exon-sc0005140-1491911889:3270..3425Clytia hemisphaericaexon
TCONS_00044195-exon-sc0005140-1510915933:3270..3425TCONS_00044195-exon-sc0005140-1510915933:3270..3425Clytia hemisphaericaexon
TCONS_00044195-exon-sc0005140-1575043694:3270..3425TCONS_00044195-exon-sc0005140-1575043694:3270..3425Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005140supercontigsc0005140:3270..3425 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044195 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top