TCONS_00044113 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044113
Unique NameTCONS_00044113
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length256

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044113 ID=TCONS_00044113|Name=TCONS_00044113|organism=Clytia hemisphaerica|type=transcript|length=256bp
CCCATCTTCATCAATAAACCCAAAAGCCATAAAATGTTCAATTTTCTTTC
GTTTTACGTCTCAAGAATTTGAAGAGACTTGAATATTTGAATTGTTCGTA
AAGAGCATCTCGAACAGATTTGGTGAATTTATTGACCAAGCAAAATGATG
TCGAAGCTTCGAATAACAGATTGTAAAATAAAACCAATTCGTAATTACCA
AGCCAGTCTAAACGTCCGAATTCACCCATTAAGTTGAAACTGGTTATACC
TAAAAG
Run BLAST on NCBI

transcript from alignment at sc0004990:3229..3484

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044113 ID=TCONS_00044113|Name=TCONS_00044113|organism=Clytia hemisphaerica|type=transcript|length=256bp|location=Sequence derived from alignment at sc0004990:3229..3484 (Clytia hemisphaerica)
CTTTTAGGTATAACCAGTTTCAACTTAATGGGTGAATTCGGACGTTTAGA
CTGGCTTGGTAATTACGAATTGGTTTTATTTTACAATCTGTTATTCGAAG
CTTCGACATCATTTTGCTTGGTCAATAAATTCACCAAATCTGTTCGAGAT
GCTCTTTACGAACAATTCAAATATTCAAGTCTCTTCAAATTCTTGAGACG
TAAAACGAAAGAAAATTGAACATTTTATGGCTTTTGGGTTTATTGATGAA
GATGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027760XLOC_027760Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044113-exon-sc0004990-1491911889:3229..3484TCONS_00044113-exon-sc0004990-1491911889:3229..3484Clytia hemisphaericaexon
TCONS_00044113-exon-sc0004990-1510915933:3229..3484TCONS_00044113-exon-sc0004990-1510915933:3229..3484Clytia hemisphaericaexon
TCONS_00044113-exon-sc0004990-1575043694:3229..3484TCONS_00044113-exon-sc0004990-1575043694:3229..3484Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004990supercontigsc0004990:3229..3484 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.07705	1.76575	0.527441	3.31378	0.954002	1.921	4.16679	1.69323	2.54196	1.02955	0.550376	0.0783203	0.868896	3.11145	0	3.11222	0	0	0	0.837068	0	3.83425	0	0.325462	0	4.04032	0	2.39664	3.63949	1.27303e-05
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044113 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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