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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044081 ID=TCONS_00044081|Name=TCONS_00044081|organism=Clytia hemisphaerica|type=transcript|length=409bp
aaaaaaatgattgaaattgtAAGGTCTCCTTTCCTTTTAGCTGGACAAAC
ACTCGATCAGTTGGATCCGTGTGGTACAACTCTGTGAGTTCGAGAATACC
ATAATCCCAGGGCTTTACATGATCAAATTAAGAAGAGGACACATCGACTA
AATAGGATGACATTCAAACTTGCAGCTCAGtgGCTGATGAATACACTTTT
GAAAGGTGGGAAAACAGAGGCACTTTCCACACCTGGCTTGCtaaagagga
aagaaaaaagGAGACTGTACCTGGCTATTCAAACTGTTGAAGGGCTGCAA
ACTACAGTCAAGACATCCACTTCATTGATGCAAGAGCTGCTTGTCGAATA
TCCTGGATTTTACACTTTGGCTGGTCGTCTTAGTCAGCCAACCTCAACCT
CAACTTATG Run BLAST on NCBI transcript from alignment at sc0004936:315..1162+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044081 ID=TCONS_00044081|Name=TCONS_00044081|organism=Clytia hemisphaerica|type=transcript|length=848bp|location=Sequence derived from alignment at sc0004936:315..1162+ (Clytia hemisphaerica)
aaaaaaatgattgaaattgtAAGGTCTCCTTTCCTTTTAGCTGGACAAAC
ACTCGATCAGTTGGATCCGTGTGGTACAACTCTGTGAGTTCGAGAATACC
ATAATCCCAGGGCTTTACATGATCAAATTAAGAAGAGGACACATCGACTA
AATAGGATGACATTCAAACTTGCAGCTCAGGTAATTTCCATATTAACTCA
AAAATTTTGCTTATGTTACTAATCATACAATTATACAACAGttatcattt
tttatatttttccttcTTATTTTTGACCATGCTAGGTGAAGTCTGAGAAT
TAGGTCTGTCTGAAATAAAATGGCTNAAATGAAATCTCATGATTTTAAAG
GAGCATTTTTTATTTGGTAAGAGATAATGTTGACAGTTTACTTGTGTGTT
GTGACCAAAttataactttttatcattttagtgGCTGATGAATACACTTT
TGAAAGGTGGGAAAACAGAGGCACTTTCCACACCTGGCTTGCtaaagagg
aaagaaaaaagGAGACTGTACCTGGCTATTCAAACTGTTGAAGGGCTGCA
AACTACAGGTTTGTAATGATTTTgcattcaaagtttttttagtatgaaat
agtacaatgttaatttttaagcAATCAATATTTCTGTGAGTGCTCCTGGC
CTTGCATGTTCTGgaggttttttttcaaaatagaaaaccaACACATTCTC
CgtcttttattctttcattcagacttttttcacttttcatctttAGTCAA
GACATCCACTTCATTGATGCAAGAGCTGCTTGTCGAATATCCTGGATTTT
ACACTTTGGCTGGTCGTCTTAGTCAGCCAACCTCAACCTCAACTTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044081-exon-sc0004936-1491911889:315..494 | TCONS_00044081-exon-sc0004936-1491911889:315..494 | Clytia hemisphaerica | exon |
| TCONS_00044081-exon-sc0004936-1510915933:315..494 | TCONS_00044081-exon-sc0004936-1510915933:315..494 | Clytia hemisphaerica | exon |
| TCONS_00044081-exon-sc0004936-1575043694:315..494 | TCONS_00044081-exon-sc0004936-1575043694:315..494 | Clytia hemisphaerica | exon |
| TCONS_00044081-exon-sc0004936-1491911889:746..872 | TCONS_00044081-exon-sc0004936-1491911889:746..872 | Clytia hemisphaerica | exon |
| TCONS_00044081-exon-sc0004936-1510915933:746..872 | TCONS_00044081-exon-sc0004936-1510915933:746..872 | Clytia hemisphaerica | exon |
| TCONS_00044081-exon-sc0004936-1575043694:746..872 | TCONS_00044081-exon-sc0004936-1575043694:746..872 | Clytia hemisphaerica | exon |
| TCONS_00044081-exon-sc0004936-1491911889:1061..1162 | TCONS_00044081-exon-sc0004936-1491911889:1061..1162 | Clytia hemisphaerica | exon |
| TCONS_00044081-exon-sc0004936-1510915933:1061..1162 | TCONS_00044081-exon-sc0004936-1510915933:1061..1162 | Clytia hemisphaerica | exon |
| TCONS_00044081-exon-sc0004936-1575043694:1061..1162 | TCONS_00044081-exon-sc0004936-1575043694:1061..1162 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004936 | supercontig | sc0004936:315..1162 + |
Blast
The following BLAST results are available for this feature:
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