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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043962 ID=TCONS_00043962|Name=TCONS_00043962|organism=Clytia hemisphaerica|type=transcript|length=1167bp
AAGGGATCATTATGGGCTAACTCAGTACACATCCCGAGCTCTCTTTCTGA
TagaagaaaattataaaaaaactagCCATTTAAGTTAAGTCTAACCCAAT
AAAACGAGTTAAAGTTATAAGTACGTTTATTTGATCTGAAAATAATATGC
TCATAAATTCTTTCAACAGGTTTTTAAATACTATAAATGTTTTGTTATAT
GGTTCAAATTCACAAAGATAAATGTGGGTAAATTTTTCGGTAtatatgtt
ttaaaattcaaaattctctATAAATGGTTAGCTTTTTTAcataaaatcaa
attaaataatGTACATtataaattcgaaaagttataaataaaaagacgac
aaaattttgtaaataatcTAAGTGCGACTATAGAAATACCAAATAGAAAC
GAAAACGttagaaaagttgaaatttgtgaaaaatgcACCTCGCGGGCTGA
AATTTGCTTGTGATTATCCCAACCGATACCACACAAGTTCATTGAGTTTT
AATACAGAATACAGTTAGCCTAGCCTTTAAAGTCCTCTTTTCAATGGAAG
GGAGTAGGGTAACTTCCGAACCAAGTGGATCGAAAAATAGAACTCAGTAA
CAGTTATTACAAGTCCAATTCACTGAGCATTGGAGGCAGTTTCTCAATTC
AgtccaagcaaaatattttgatcgtAGGCAAAATTCTATCACTTCAATGA
CTTCTTTACGGgtaacactttcaaaaaaactccgatcaaagatggctgAT
ATAGCTTGGcccagggtttataaaggtcagtggtccaatttcattaaaaa
tctaaaacctAAATTCCTTTGGCAGCTCATAATAAACTTGTGGACCGTAA
ATCATTGATTCTTGCTTTCGGGATACCaggttttttgtcaaattccAATT
TCCATATGACCATTAAGAAGAAGAATAAACTCAAACCACAACAACCAGCC
ATGACCAGGAAGAAGACCACCATTTTATGTGAGTCGTCGACACCAATCTG
TGGAAACCAACCAGCTTGCATAATGATGAACGAAATAAAATGACCACAAG
CGATTGTAAAGTAGTATAAACTACTCGTTGCTTTGAGTAAGAGCCCTTTG
CATAGACGATTGGATATACTCAATCCTAAAAAAGAGAAGGAGGCatatat
ctttttttataaatgcC Run BLAST on NCBI transcript from alignment at sc0004778:3270..4436 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043962 ID=TCONS_00043962|Name=TCONS_00043962|organism=Clytia hemisphaerica|type=transcript|length=1167bp|location=Sequence derived from alignment at sc0004778:3270..4436 (Clytia hemisphaerica)
GgcatttataaaaaaagatatatGCCTCCTTCTCTTTTTTAGGATTGAGT
ATATCCAATCGTCTATGCAAAGGGCTCTTACTCAAAGCAACGAGTAGTTT
ATACTACTTTACAATCGCTTGTGGTCATTTTATTTCGTTCATCATTATGC
AAGCTGGTTGGTTTCCACAGATTGGTGTCGACGACTCACATAAAATGGTG
GTCTTCTTCCTGGTCATGGCTGGTTGTTGTGGTTTGAGTTTATTCTTCTT
CTTAATGGTCATATGGAAATTggaatttgacaaaaaacctGGTATCCCGA
AAGCAAGAATCAATGATTTACGGTCCACAAGTTTATTATGAGCTGCCAAA
GGAATTTaggttttagatttttaatgaaattggaccactgacctttataa
accctgggCCAAGCTATATcagccatctttgatcggagtttttttgaaag
tgttacCCGTAAAGAAGTCATTGAAGTGATAGAATTTTGCCTacgatcaa
aatattttgcttggacTGAATTGAGAAACTGCCTCCAATGCTCAGTGAAT
TGGACTTGTAATAACTGTTACTGAGTTCTATTTTTCGATCCACTTGGTTC
GGAAGTTACCCTACTCCCTTCCATTGAAAAGAGGACTTTAAAGGCTAGGC
TAACTGTATTCTGTATTAAAACTCAATGAACTTGTGTGGTATCGGTTGGG
ATAATCACAAGCAAATTTCAGCCCGCGAGGTgcatttttcacaaatttca
acttttctaaCGTTTTCGTTTCTATTTGGTATTTCTATAGTCGCACTTAg
attatttacaaaattttgtcgtctttttatttataacttttcgaatttat
aATGTACattatttaatttgattttatgTAAAAAAGCTAACCATTTATag
agaattttgaattttaaaacatataTACCGAAAAATTTACCCACATTTAT
CTTTGTGAATTTGAACCATATAACAAAACATTTATAGTATTTAAAAACCT
GTTGAAAGAATTTATGAGCATATTATTTTCAGATCAAATAAACGTACTTA
TAACTTTAACTCGTTTTATTGGGTTAGACTTAACTTAAATGGctagtttt
tttataattttcttctATCAGAAAGAGAGCTCGGGATGTGTACTGAGTTA
GCCCATAATGATCCCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043962-exon-sc0004778-1491911889:3270..4436 | TCONS_00043962-exon-sc0004778-1491911889:3270..4436 | Clytia hemisphaerica | exon |
| TCONS_00043962-exon-sc0004778-1510915933:3270..4436 | TCONS_00043962-exon-sc0004778-1510915933:3270..4436 | Clytia hemisphaerica | exon |
| TCONS_00043962-exon-sc0004778-1575043694:3270..4436 | TCONS_00043962-exon-sc0004778-1575043694:3270..4436 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004778 | supercontig | sc0004778:3270..4436 . |
Blast
The following BLAST results are available for this feature:
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