TCONS_00043945 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043945
Unique NameTCONS_00043945
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length181

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043945 ID=TCONS_00043945|Name=TCONS_00043945|organism=Clytia hemisphaerica|type=transcript|length=181bp
TTTACTAATAATCCTATAATCTCTGTTATTACAACTCCTGATGTGCATGA
CCGGCCATCATCCAGATGACTTGTATCATCTTGGGATTCGTCCCACTATG
ATGCTAGCCTCATCTTGATGATATTattaaagtttcaaaatttcttcgcA
TTGTTGGTTTCTGTGTTCCTCTTGTAAAATG
Run BLAST on NCBI

transcript from alignment at sc0004757:1174..1354

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043945 ID=TCONS_00043945|Name=TCONS_00043945|organism=Clytia hemisphaerica|type=transcript|length=181bp|location=Sequence derived from alignment at sc0004757:1174..1354 (Clytia hemisphaerica)
CATTTTACAAGAGGAACACAGAAACCAACAATgcgaagaaattttgaaac
tttaatAATATCATCAAGATGAGGCTAGCATCATAGTGGGACGAATCCCA
AGATGATACAAGTCATCTGGATGATGGCCGGTCATGCACATCAGGAGTTG
TAATAACAGAGATTATAGGATTATTAGTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027609XLOC_027609Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043945-exon-sc0004757-1491911889:1174..1354TCONS_00043945-exon-sc0004757-1491911889:1174..1354Clytia hemisphaericaexon
TCONS_00043945-exon-sc0004757-1510915933:1174..1354TCONS_00043945-exon-sc0004757-1510915933:1174..1354Clytia hemisphaericaexon
TCONS_00043945-exon-sc0004757-1575043694:1174..1354TCONS_00043945-exon-sc0004757-1575043694:1174..1354Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004757supercontigsc0004757:1174..1354 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043945 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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