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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043876 ID=TCONS_00043876|Name=TCONS_00043876|organism=Clytia hemisphaerica|type=transcript|length=1070bp
atttctgacaagtttgagctgagaaaactaacagtagaaattttttgaat
ctcATCTGTGGAAACTATGATGCATACAAACAAAGTGAAATGATTTATTA
CACAAAAGAAGGTCATGATGTAAGTGTAATAAAATAATCTTTGCtgactt
ttttatcaaaccaaaactttgtttttcttctcttttttatcttgtttttt
atATGCTCTCAAAGTCCAAATACATTCAAAGTAACCATTACAATGAACAG
CATgtaaccatatttctttttcatgtttttcagtgtttcttTGGTGCCAC
CATCAAGTGCGAAGAAGCCAAAGTTATAATGTCACCCACCCAAAGTAACA
AACACGAAAAAGACTGCTCTGCCAAGCTCAAACAGTCAAATAAATTTACC
CTTCCACCCGAAGCATAACAgaagaaatctttatttattgTTCCAATTTC
AACTGCTACAACTAAGCAAGGAGATTCAATTTCTGCTCTCCATCATCAAC
TGAATATTGTACATACAAATCAGCCTGCTGAGTAAAAACCTGATGTCACA
CAACCGCTGAACTTCAAACCGTTCTCGAAAATTATATAAAGCTCTATCTT
CTGGACAACCGCTACTGCTTTAAGTTCTCAATCCTTTACTGAAAAATGTT
TATTGACTTGTCATCCTTCAACTTCTTCGACATTATAATGTTATAACGTT
CCAGAAAGTTTGGTTTGATTCTAAAGAGACATCTCCCTTCCTAAAAAGGT
GATATTGATACCTTGGAATGTNNNNNNNNNNNNNNNNNNNNNNNNNAACA
CCTGCCAGATATGAAACTCGAGACCTGGtttgcacacttttttataagag
tgttTTTATTGGTAATGCTAATGGTGAAGCATTCATATAGAAATGCAGCT
AATAAATAAGGATGACAGACTGTATACACTATGCTCTtacagattatttt
tttgtttataaataaagcCGCAGTAATTTTTGATTGGTACCTATGTAAAC
TAggaatgaaattatgaaattatatatttCTATTGCAATGTTAAGAATTC
ATTGAAATGATAAGTCATAG Run BLAST on NCBI transcript from alignment at sc0004692:521..1590 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043876 ID=TCONS_00043876|Name=TCONS_00043876|organism=Clytia hemisphaerica|type=transcript|length=1070bp|location=Sequence derived from alignment at sc0004692:521..1590 (Clytia hemisphaerica)
CTATGACTTATCATTTCAATGAATTCTTAACATTGCAATAGaaatatata
atttcataatttcattccTAGTTTACATAGGTACCAATCAAAAATTACTG
CGgctttatttataaacaaaaaaataatctgtaAGAGCATAGTGTATACA
GTCTGTCATCCTTATTTATTAGCTGCATTTCTATATGAATGCTTCACCAT
TAGCATTACCAATAAAaacactcttataaaaaagtgtgcaaaCCAGGTCT
CGAGTTTCATATCTGGCAGGTGTTNNNNNNNNNNNNNNNNNNNNNNNNNA
CATTCCAAGGTATCAATATCACCTTTTTAGGAAGGGAGATGTCTCTTTAG
AATCAAACCAAACTTTCTGGAACGTTATAACATTATAATGTCGAAGAAGT
TGAAGGATGACAAGTCAATAAACATTTTTCAGTAAAGGATTGAGAACTTA
AAGCAGTAGCGGTTGTCCAGAAGATAGAGCTTTATATAATTTTCGAGAAC
GGTTTGAAGTTCAGCGGTTGTGTGACATCAGGTTTTTACTCAGCAGGCTG
ATTTGTATGTACAATATTCAGTTGATGATGGAGAGCAGAAATTGAATCTC
CTTGCTTAGTTGTAGCAGTTGAAATTGGAAcaataaataaagatttcttc
TGTTATGCTTCGGGTGGAAGGGTAAATTTATTTGACTGTTTGAGCTTGGC
AGAGCAGTCTTTTTCGTGTTTGTTACTTTGGGTGGGTGACATTATAACTT
TGGCTTCTTCGCACTTGATGGTGGCACCAaagaaacactgaaaaacatga
aaaagaaatatggttacATGCTGTTCATTGTAATGGTTACTTTGAATGTA
TTTGGACTTTGAGAGCATataaaaaacaagataaaaaagagaagaaaaac
aaagttttggtttgataaaaaagtcaGCAAAGATTATTTTATTACACTTA
CATCATGACCTTCTTTTGTGTAATAAATCATTTCACTTTGTTTGTATGCA
TCATAGTTTCCACAGATgagattcaaaaaatttctactgttagttttctc
agctcaaacttgtcagaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043876-exon-sc0004692-1491911889:521..1590 | TCONS_00043876-exon-sc0004692-1491911889:521..1590 | Clytia hemisphaerica | exon |
| TCONS_00043876-exon-sc0004692-1510915933:521..1590 | TCONS_00043876-exon-sc0004692-1510915933:521..1590 | Clytia hemisphaerica | exon |
| TCONS_00043876-exon-sc0004692-1575043694:521..1590 | TCONS_00043876-exon-sc0004692-1575043694:521..1590 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004692 | supercontig | sc0004692:521..1590 . |
Blast
The following BLAST results are available for this feature:
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